Conger conger (European conger): 133126916
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Entry
133126916 CDS
T10633
Symbol
lsm5
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133126916 (lsm5)
09123 Folding, sorting and degradation
03018 RNA degradation
133126916 (lsm5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133126916 (lsm5)
03041 Spliceosome [BR:
ccog03041
]
133126916 (lsm5)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133126916 (lsm5)
mRNA degradation factors
5'-3' decay
Lsm complex
133126916 (lsm5)
Spliceosome [BR:
ccog03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
133126916 (lsm5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
133126916
NCBI-ProteinID:
XP_061095401
UniProt:
A0A9Q1DT23
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All DBs
Position
4
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AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactccagcaacgaatccgtcacaattgcttcctctggaactcgtggacaag
tgcattggctccagaatccacatcgttatgaagaatgacaaagagatcgtcggaaccctt
ttgggcttcgatgattttgtcaacatggtgctggaggacgtgacggaattcgagatcaca
ccggaagggaggaggataaccaaactggatcagatcttgctgaatggcaacaacatcact
atgctcattcctggaggggagggcccagaggtgtga
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integrated database retrieval system
