Conger conger (European conger): 133128122
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Entry
133128122 CDS
T10633
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133128122 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133128122 (hbs1l)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133128122 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
133128122
NCBI-ProteinID:
XP_061097409
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All DBs
Position
5:5276453..5332229
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AA seq
681 aa
AA seq
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MSRHRNVRGYNYDEDFDDDDVYGQSVDDDYCISPATAAQFIYSRREKPAAFAEPLEEEEH
EAEEDMPTSPSINHLNLAPLDQGRLYSCLDHMRTVLGDAVSESVLAEAAVAAGFDPQKAL
DSVLSGENRTASAPAKPQQEAPPSASRSKKAGKGRDPPVSKLDSEILPKVARMTVSGKKP
TLGFDLPSSEENGIVAARKGASPEDVVAMATAGPDSSARPVASEDPVAVPTPVKSGKNKH
QLNVKEELEKRQGGKPLLNLVVIGHVDAGKSTLMGHVLYLLGNVNKRTMHKYEQDSKKAG
KASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVVTLMDAPGHKDFIPNMITGAAQAD
VAVLVVDASRGEFEAGFESGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEILS
KLGHFLKQAGFKDSDVSYIPTSGLSGENLSVRSTVPALTSWYKGPCLLEQIDAFKPPQRS
VDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRVLAMPPNESCTVKGITLHDEPIDW
AAAGDHVSLTVTGMDIIKINVGCVFCDMKESIKACTRFRARVLLFNIELPVTQGFPVLLH
YQTVSEPATIRKLVSILHKSSGEVLKKKPKCLTKGQNAVVEIQTQRPVALELYKDFKELG
RFMLRYVGSTIAAGVVTEIKE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacacagaaatgtccgcggttataactacgacgaagatttcgatgatgacgac
gtgtatgggcaatctgtagacgatgactactgcatctcacctgctacagcggcccagttc
atttactcccggcgggagaagccggcggccttcgccgagcccctggaggaagaggagcac
gaggcagaggaggacatgcccacatccccgtccatcaaccacctgaacctggccccgctc
gatcagggacggctgtactcttgtctggatcacatgcggacggtgctgggagacgcggtg
tccgagtctgtcctggcggaggcggcagtggccgccggcttcgacccccagaaggcgctg
gactccgtgctctccggggagaacaggacggcatcggcgcccgccaaaccccagcaggag
gccccgccgtccgcttcgcggagcaagaaagcagggaaaggacgggaccctccggtcagt
aaactcgactcagagatcctgcccaaagtggcccgcatgacggtctcagggaagaagcca
acgctgggcttcgaccttcccagctccgaggagaacgggattgtggctgcgcgtaagggg
gcgtctcccgaggacgtggtcgccatggcgacggcgggccctgactcctcggcccgccca
gtggccagcgaggacccggtcgccgtgccaaccccggtgaagtccggcaaaaacaaacat
cagctgaacgtgaaggaggagctggagaaacgacagggaggaaaaccgctgctcaacctg
gtggtgatcggtcacgtagacgcagggaagagcacgctcatgggccacgtgctctacctg
ctgggcaacgtcaacaagaggaccatgcacaagtacgagcaggactccaagaaggccggg
aaggcgtccttcgcctacgcctgggtcctggacgagaccggggaggagcgcgagaggggt
gtgaccatggatgtggggatgacgaagtttgagacgaagaccaaagtggtcaccctaatg
gatgcaccaggacacaaggacttcatccccaacatgatcacaggggcggcccaggcggac
gtggcggtcctggtggtggatgccagccggggcgagttcgaggccgggttcgagtcgggc
gggcagacgcgggagcacggcctgctggtgaggtcactgggggtcacgcagctcgccgtc
gccgtcaacaagatggaccaggtgaactggcaacaggagcgcttccaagaaattctaagc
aaacttggccacttcctgaaacaggcggggttcaaggactcggacgtgtcctacatcccc
accagcggtctctccggagagaacctgtcggtccgcagcacggtcccggccctgacgtcc
tggtacaagggcccctgcctcctggagcagatcgatgcgttcaaaccgccgcagagatcg
gtggataagccgttccgtctctgcgtctccgacgtcttcaaagatcaggggtcggggttc
tgcgtgacggggaagatcgaggcggggtacatccagacgggcgaccgcgtgctggccatg
ccccccaacgaatcctgcaccgtcaaaggtatcacgctgcatgacgagccgatcgattgg
gccgcagcgggggaccacgtcagcctcaccgtgaccggcatggacatcatcaaaattaat
gtgggctgtgtgttctgcgatatgaaggagtccattaaggcttgcacccgtttccgagcc
agagtcctgctcttcaacatcgagctgcccgtcacccagggcttccccgtcctgctgcac
taccagaccgtgagtgagccggccaccatcaggaagctggtcagcatcctccacaagagc
agtggggaagtcctgaagaagaagcccaagtgcctcactaaggggcagaacgcggtggtg
gagatccagacccagcggcccgtggctctggagctgtataaggactttaaggagctgggc
cggttcatgctgcgctacgtgggctccaccatcgccgccggcgtggtcaccgagatcaaa
gaatga
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