Conger conger (European conger): 133128323
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Entry
133128323 CDS
T10633
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A isoform X1
KO
K08526
retinoid X receptor gamma
Organism
ccog Conger conger (European conger)
Pathway
ccog03320
PPAR signaling pathway
ccog04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133128323 (rxrga)
03320 PPAR signaling pathway
133128323 (rxrga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133128323 (rxrga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ccog03310
]
133128323 (rxrga)
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
133128323 (rxrga)
Nuclear receptors [BR:
ccog03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
133128323 (rxrga)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
133128323
NCBI-ProteinID:
XP_061097701
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Position
5:complement(49878153..49908158)
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AA seq
448 aa
AA seq
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MDNNDTYLHLNPSSHCHITPPPSQTMNSMVGHPSVISASVNAPRPLPSPLSGMGSPYSVI
TSSLGSPSISLPSTPGINFGTLCSPQMSSLNSVSSTEDIKPPPGLAGLGSYQCTSPGSLS
KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDKRQRNRCQYCR
YQKCLAMGMKREAVQEERQRGREKSDNEVESTSSFSEDMPVEKILDAELAVEPKTETYMD
ASPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFS
HRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIV
LFNPDAKGLSNPPEVESLREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCLE
HLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggataataatgacacgtatctacatttaaatccgtcctctcactgtcacataaccccg
cccccgtcccagacgatgaactccatggtgggacacccctccgtcatcagtgcctcggtc
aacgccccccggcccctcccttcccccctgagtggcatgggctcgccgtactccgtcatc
acgtcctccctgggctcgccctccatctccctgccctccacgccagggatcaacttcggt
acactttgcagtccacagatgagctcacttaacagtgtgagcagcacagaggacatcaaa
ccccctcccggtctggcaggactgggcagctaccagtgcaccagcccagggtccctgtcc
aagcacatctgtgccatctgcggagaccgttcctcaggaaagcactatggcgtgtacagc
tgtgaaggctgcaaagggtttttcaagaggaccatcaggaaagacctcacctacacttgc
agggacagcaaggagtgtctgatcgacaagcggcagcggaaccgctgccagtactgccgc
taccagaagtgtctggccatgggcatgaagagggaagcggtgcaggaggagaggcagagg
gggcgggagaagagcgataatgaggtggagtccaccagcagcttcagtgaagacatgccg
gtggagaagatcctagatgccgagctggccgtggagcccaagacagagacgtacatggac
gccagtcctgggaactcgacaaacgatcccgtcaccaacatctgccaagcagcagacaag
cagctcttcactctagttgagtgggccaagaggatcccgcacttctctgagctaccgctc
gacgaccaggtcatcctgctgcgagcaggttggaacgagctgctcatcgcttccttctca
caccgttcggtcacagtcaaggatggaatcctgctggctaccgggctgcacgtccaccgc
agcagcgcccacagtgctggtgtcggttccatctttgacagagttctgacggaactggtg
tcaaagatgaaagatatgcagatggataagacagagctgggctgtctccgtgccatcgtc
ctgtttaacccagacgcaaagggcttgtcaaacccaccagaggtagagagtctacgggag
aaggtgtacgcttcactagagtcctacaccaagcacagataccctgaacagccaggcagg
tttgccaaacttcttcttcgcctgccagccctgcgctctatcggcctgaagtgtttagaa
cacctcttcttcttcaagctgatcggtgacacgcccatcgatacctttcttatggagatg
ctagaggcaccgcaccagatcacatga
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