Conger conger (European conger): 133128450
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Entry
133128450 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
ccog03015
mRNA surveillance pathway
Brite
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
133128450
5.6.2.5 RNA 5'-3' helicase
133128450
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
133128450
mRNA cycle factors
Common to processing body (P body) and stress granule
133128450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133128450
NCBI-ProteinID:
XP_061097960
LinkDB
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Position
5:66466339..66492127
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AA seq
1095 aa
AA seq
DB search
MSVEAYGPSSQTLTFLDTEEAELLGADTQGSEYEFTDFTLPSQTQTQGHTQSQLDNQVIV
SDGLLQNGGLDEAVSKSSQLLAELNFEEDEEDTYYTKALPVHACSYCGIQDPACVVYCNT
SKKWFCNGRGNTSGSHIVNHLVRAKCKEVALHKDGPLGETVLECYNCGCRNAFLLGFIPA
KADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITA
QQINKLEELWKENPGATLEDLEKPGVDEEPQRVLLRYEDAYQYQNIFGPLVKLEADYDKK
LKESQTQDNITVRWDLGLNKKRIAYFSLPKTDSGDMRLMQGDEICLRYKGDLAPLWKGIG
HVIKVPDNYGDEIAIELRSSVGAPVEVPHSFQVDFVWKSTSFDRMQSALKTFAVDETSVS
GYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGK
TVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSF
LALHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICGTCV
GAGDPRLAKMQFRSILIDESTQATEPECMVPVILGAKQLILVGDHCQLGPVVMCKKAAKA
GLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRIRKGFDFQ
WPQPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTRLLKAGAKPDQIGVITPYEG
QRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRR
LNVALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRK
LVNTINPGARFMSTAMYDAREALIPGSVYDRSTTVRPANMYFQTHDQIGMIGAGPNPLAA
LNIPIPFNLVMPPLPPPGYLGQSNGPVAGRGAMKGKMGRGGRQRGRGLGHHGDGQGAVPS
SQASQDMQSGPLTQGFISISQPSQMSQPGLSQPELSQDSYLGDEFKSQMDVALSQDSTYQ
GERAYQHGVTGLSQY
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggaggcgtacgggccaagctcacagactctcaccttcctagacaccgaggaa
gcggagctgctcggagccgatacccagggctcggagtacgagttcaccgactttactctg
cccagccagacccaaacgcagggccatacgcagagtcagttggacaaccaggtgatcgtc
tccgacgggctcctacagaatggcggtcttgacgaggcggtctcgaagagcagtcagctt
ctggccgagttgaacttcgaggaagatgaggaggacacgtattacaccaaggctctgccc
gtgcacgcctgcagctactgtgggatccaggaccctgcttgcgtggtgtactgtaacacc
agtaagaaatggttctgtaatggccgtggaaacacctctggcagccacatagtgaaccac
ctggtccgggccaagtgtaaggaggtggccctgcacaaggacgggcccctgggcgagacg
gtcctggagtgctacaactgcggctgccgcaacgccttcctgctgggcttcatcccggcc
aaggccgactcggtggtggtgctgctgtgcaggcagccgtgtgccagtcagagcagtctg
aaggacatcaactgggacagctcccagtggcagcccctgatccaggaccgctgcttcctc
tcctggctggtgaagatcccgtcggagcaggagcagctccgtgcccggcagatcaccgcc
cagcagatcaacaagctggaggagctctggaaggagaacccgggcgcgacgctggaggac
ctggagaagccgggcgtggacgaggagccccagcgggttctgctgcgttacgaggacgcg
taccagtaccagaacatcttcggcccgctcgtcaagctggaggccgactacgacaagaag
ctcaaagagtcccagacccaggacaatatcacagtccgctgggacctgggcctgaataag
aagcgcatcgcttatttctcactgcccaagacggactcaggtgacatgcggctgatgcag
ggcgatgagatctgcctgaggtataaaggagacctggctcctctgtggaagggcatcggc
cacgtcatcaaagtgcctgacaactacggcgatgagattgccatagagctgcgcagcagt
gtgggcgctccagtggaggtgccgcacagcttccaggtggatttcgtgtggaagtccacc
tcctttgacaggatgcagagtgcgctgaagacctttgcagtggatgagacctcggtctct
gggtacatctaccacaagctgctggggcacgaggtggaggacgtggtcatcaagtgccaa
ctgcccaaacgcttcaccgcccagggcctgccagacctcaaccactcccaggtttacgct
gtgaagacggtgcttcagagacccctcagtctcatccagggacccccaggaacagggaag
accgtcacctcggcaaccatcgtttaccacctggcccgccagggaaacgggcctgtgctg
gtgtgcgctcccagcaacatcgcggtggaccagctgacggagaagatccaccagacgggg
ctgaaggtggtgcggctctgcgctaagagccgggaggccatcgactcgcccgtgtccttc
ctggcgctgcacaaccagatccgcaacatggacagcatgcctgagctgcagaagctgcag
cagctgaaggacgagacgggcgagctgtcctccgctgacgagaagcgctatcgagcgctg
aagcgtacggccgagagggagctgctcatgaacgcggacgtgatctgcgggacgtgtgtg
ggggcgggggacccccgcctggcgaagatgcagttccgctccatcctgatcgacgagagc
acccaggccacggagccggagtgcatggtgcccgtcatcctgggagccaaacagctcatc
ctggtgggggatcactgccagctgggcccggtggtgatgtgtaagaaggcggccaaggcg
gggctgtcccagtccctgttcgagcggctggtggttctgggcatccggcccatccgcctg
caggtccagtaccgcatgcacccggcgctcagcgccttcccctccaacatcttctacgag
ggctctctgcagaacggggtgaccgccgcggaccgcatcaggaagggctttgacttccag
tggccgcagccggacaagcccatgttcttctacgtgacgcagggccaggaggagatcgcc
agctcagggacgtcctacctgaacaggaccgaggcggcgaacgtggagaagatcaccacc
cggctgctgaaggccggggccaagccggaccagatcggcgtcatcacgccgtacgagggc
cagcgctcctacctggtgcagtacatgcagttcagcggctccctgcacaccaagctgtac
caggaagtggagatcgccagtgtggatgctttccagggccgagagaaggatttcatcatc
ctgtcctgcgtccgagccaacgagcaccagggcatcggattcctgaacgacccccgacgc
ctgaacgtggccctcaccagggcccggtacggggtgatcatcgtggggaaccccaaggcc
ctgtccaagcagccgctgtggaaccacctgctgaactactacaaggagcagaaggtcctg
gtggagggacccctcaacaacctgcgcgagagcctcatgcagttcagcaagccccgcaag
ctggtcaacaccatcaaccccggtgcgcgcttcatgagcactgccatgtatgatgccaga
gaggccctgatccccggctctgtgtacgaccgcagcaccacggtgcgcccggcgaacatg
tacttccagacgcacgaccagatcggcatgatcggggcggggcccaaccccctggcggcc
ctgaacatccccatccccttcaacctggtgatgccccccctgcccccgcccgggtacctg
ggccagagcaacggccctgtcgcagggcgcggcgctatgaaggggaagatgggccgcggc
gggcggcagaggggccgcgggttgggtcaccacggcgacgggcagggcgccgtgcccagc
agccaggccagccaggacatgcagtccggccccctgacccagggcttcatctccatcagc
cagccgtcccagatgagccagccgggcctctcccagccagagctgtcccaggacagctat
ctgggcgacgagttcaagtcccagatggacgtggctttgtcccaggactccacgtaccag
ggcgagcgtgcgtaccaacacggagtgacgggactgtcgcagtactag
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