Conger conger (European conger): 133128914
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Entry
133128914 CDS
T10633
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133128914
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133128914
09142 Cell motility
04820 Cytoskeleton in muscle cells
133128914
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133128914
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133128914
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133128914
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133128914
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133128914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133128914
NCBI-ProteinID:
XP_061098706
LinkDB
All DBs
Position
5:complement(54459283..54495290)
Genome browser
AA seq
1534 aa
AA seq
DB search
MSRAKRNVAGVSWCYLTLWWFVLLYLCQQRANGGQLQEPCRGRDCSVCQCFPAKGSHGGP
GHLGRRGSQGPRGPPGLQGPHGEKGRSGDAGDPGEEGEVGDVGMTGVPGFPGLDGVPGYP
GPGGPPGLPGWDGCNSSRGDPGIPGVPGGQGRYGITGAPGVKGQKGDPIYGKSSPGPPGD
AGPQGHPGVPGHPGIIGPSGPPGLTGQAGIQGVPGVPGPRGTPGDTGRSLPGQKGDEGDQ
GIQGPPGPFEIVEPPVEQYQKGDKGEKGIKGVCGAPGTDGAYSARGEKGEKGILGLPGSR
GFPGSLGQPGYYGSQGPSGDPGLPGLIGNPGPKGYLGDPGPRGPPSAGHINQKGDSGSIG
NTGPPGEVGPPGEPGHIGLPGLPGPPGQSLTGPVGRPGGPGFRGPKGVKGKPGWSYTDRI
PGQPGVQGPPGAKGLRGPPGRGGHAHSCLKGEMGEPGDVGGQGPPGASGEKGKRGCAGEC
FCEGPALPGDPGLEGEPGRPGVPGRVGIRGDPGPHGDTGGPGRHVLVASQVSQEKQGKMG
LLAPQGIQDRRGMVTQGCQATEGIQDQMGSKALRDLPDHQVTRCPVSTITPDQWDLRATL
ALTVSREIQAFWVFLGPPAQPGPKEREAILGNGVEPQVPRRTWHGVRGAPGDPGYPGPAG
PSLQGHPGLPGRRGLQGPKGQPADGRGAQGPPGPPGPPGLPGIPGPKAGHGPPGPPGSEG
NCSQETGPPGLPGPPGEKGSKGSQGYLGEKGMKGDVGLSGRGRKGPQGDLGPPGPPGHPG
SPGPQGISGDPGNLGPAGVKALPGRPGPTGRPGRKGERGVDDFPGPPGPKGFKGRKGVQG
RAGRLGDMNMFKGTRGDMMRGPQGYTGPRGQKGQPGGAGQPGRDGWPGSPGLPGLPGRPG
ASLPGAKGLPGSPGCNGTAGPVGDQGDFGYSGPPGLPGPQGYPGIKGGPGLEGDRGAPGF
SGPPGNRGLPGPKGCAGQGLPGPPGPPGFAGLTGAQGYPGRAGPPGPTGRLGAPGSPGPP
GSPGPHGIPGLNGLRGVKGEKGSRGAGERGPDGPRGFPGDRGPNGNPGPQGTSLWGPKGV
RGWEGSPGEPGSPGDVGLPGTGCCNYTSALPGDPGNQGKTGPPGPPGVIGLPGTGLPFRG
ERGNDGPPGHPGPKGETGPRGPPGHPGFPGPPGPKGMTGLMGIMGVPGPKGPPGLEGRRG
CVGDKGMIGEPGPKGLPGDPVFRPTPGPPGPPGPIGPPGPPGFPGNPGNVGTVGIIGRKG
QPGSPGLPGVDGALGPAGAPGDPGADGVRGFVGPQGIPGPPGERGFPGSSRANGYGFLLV
MHSQSEEIPICPVNMVTMWNGYSLLYMEGQGKARPQDLGRAGSCLRIFSTMPFSYCNMAA
CNYASRNDKSYWLSTTAATPMMPVSGAEIRQHVSRCVVCEAPSPAVAVHSQEPSTPPCPS
RWRSLWTGYSFLMHQGGGQSLTSPGSCLRDFRSQPSIECQGPRGTCHYFTNAYSFWLTRV
GAAEQFSPAPASNTLKEAWQQRQTTSRCNVCIRE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgagcgaagaggaacgttgccggggtcagctggtgttacctgaccctgtggtgg
tttgtacttctttatctctgccaacaaagggccaatggggggcagctgcaggagccttgt
cgggggagagactgctctgtgtgtcagtgttttccagccaaaggatcccatggtgggcca
ggccacctgggtcgccggggctcacaggggccccggggcccaccaggcctccaggggcct
catggagagaagggaagatcaggtgacgctggagatcctggggaagaaggggaggtcggg
gacgtgggcatgactggcgttcctggttttcccggactagatggcgtccctgggtaccct
gggcctgggggtcctccgggtctcccggggtgggacggctgcaactcgtcgaggggagac
cccggaatcccgggcgtcccgggcgggcaggggcgttacgggatcacgggagctccaggg
gtgaaaggtcagaagggggaccccatctatggcaaatcctctccaggaccccctggtgat
gctggaccgcaaggacatcctggtgtgcctgggcaccctggtatcattggtcccagcggt
ccacctgggctgacaggacaagcagggatacagggagtccctggtgtgcctggaccaaga
ggaacacctggtgacacaggccgatcactgccaggacagaagggtgacgagggagatcag
ggcatccaaggcccccccgggccctttgagatcgtggagcccccggtggagcagtaccaa
aagggagataagggggagaaaggcataaagggagtgtgtggagccccaggcactgacgga
gcgtattcagcccgaggagagaaaggagaaaagggaatccttggtcttcctggatcacgg
ggatttcctggctcccttggtcaacctggctactacggatcacagggacccagtggggac
cccggacttcctggcctgatcggaaacccaggcccaaagggctacttaggagacccgggg
ccaaggggacccccgagcgcaggacacatcaatcaaaaaggagattctggaagtattggt
aatacgggccctcccggagaagtggggcccccaggggagcccgggcatattggcctccca
ggactaccaggacccccagggcagtccctaacaggtccagtgggtcggccaggcggccca
gggttccggggcccaaagggggtgaaggggaagcctgggtggtcctacactgaccgcata
ccaggacaacctggggtgcaggggccaccaggggccaaaggactccgtggtcctccagga
cgcggtgggcatgcccattcctgtctcaaaggggagatgggtgaacctggagatgttgga
ggccaaggtccccctggagcctcaggggagaaaggaaagagaggctgtgcaggggagtgt
ttctgtgagggccctgccctgccaggtgacccgggcctggaaggggagccaggtcgcccc
ggcgtgcctggcagggtgggcatccggggagatcccggcccccacggggatacaggagga
cccggacgccatgtcctggtggcttcccaggtgtcccaggagaagcaggggaagatgggc
ctcctggcaccccaggggatccaggaccgccgggggatggttacccagggttgccaggcg
acagagggtatccaggaccagatgggttcaaaggccctccgggacctgccggaccaccag
gtgacacgctgccctgtgagtaccataaccccggaccagtgggacctaagggcgaccctg
gccctaacggtgtcccgggagatccaggccttctgggttttcctgggccctccggcccag
ccgggcccaaaggagcgagaggcgatcctggggaacggggtggaaccgcaggtaccaaga
cgaacatggcacggggtacgaggggctccgggagatccaggatacccaggccccgcaggg
ccgagcctgcaggggcaccctggactgcctggccgacgtggcctccaggggccgaaggga
cagcctgccgacggccggggggcccagggacccccaggaccaccaggaccaccagggctt
cctgggatacctggaccaaaagcaggccatggcccaccaggcccacctggctcagaaggg
aactgttcccaggaaactgggcccccgggcctgccagggccccccggggagaaaggctcc
aagggctcccaaggttacctcggagagaaaggcatgaagggtgacgtcggcctctctggc
aggggcaggaagggaccccaaggggacttaggccccccaggcccccccggacaccccgga
tctcccggcccccaaggaatctcgggcgaccctggaaatctggggccagctggggtgaaa
gcgttacctggacggccgggccccactgggcgtccggggaggaaaggggagcgaggggtc
gatgacttccctggccctccggggcccaaggggttcaaaggcagaaaaggtgtgcagggc
cgtgccggccgcctgggagacatgaacatgttcaaagggactcggggagacatgatgcgg
gggccacagggatacactggccccagaggtcagaaaggacagccaggaggggcggggcag
ccgggcagagacgggtggcccggctccccggggttgccgggtctgccggggcgaccaggg
gccagtctgcccggagcgaagggccttccgggatcgcccgggtgcaacggtacagccggt
cccgtgggcgaccagggagattttgggtacagtggcccccccggactccccgggccacag
gggtaccccggaattaaaggtggtcctggtttggagggggacagaggggcccccggtttc
tctggccccccaggaaacaggggacttcctggccccaaaggctgtgctggacaggggctc
ccaggaccacctggcccacctggtttcgcaggtctgaccggtgctcaggggtaccctggt
cgagcaggacctccaggaccaactggccgtctaggcgccccaggaagcccaggcccccca
ggttccccggggcctcatggtatcccgggtttgaatggtctgagaggagtgaagggggag
aaggggagcagaggtgctggtgagaggggccccgatggaccccgaggattcccaggggac
cggggccctaacggcaacccagggccacaagggacctctctctggggccccaaaggtgtg
aggggctgggaggggtcaccgggtgaaccaggaagccctggtgatgttggtcttcctggc
acaggctgctgtaattacacctctgcactaccaggagaccctggtaaccaagggaaaaca
gggccaccagggccgccaggggtcattgggttgccagggacagggcttccatttcggggc
gaaagggggaatgacggtcctccaggacacccaggtccaaaaggagagacgggtcccaga
ggacctcccggacacccagggtttccagggccccccggtcccaaaggtatgaccggactt
atggggataatgggcgtgccggggcccaagggccctcccggtcttgagggccgaagagga
tgtgtgggagataaggggatgatcggagagccaggacccaaagggcttcctggggaccct
gtcttccgccccacacctggaccacctggaccaccaggacccattggtccaccggggcct
cctggtttccctggcaacccaggaaacgttgggacagtcggaattatagggagaaagggt
cagccagggtcaccaggattaccaggtgtggacggggccctgggaccagcaggagctcca
ggagaccccggggccgatggggtgcgagggtttgtgggaccgcaaggcatcccgggtcct
ccaggtgagaggggattcccaggctcttccagggccaatggttacggcttcctgttggtg
atgcacagccaatcagaagagattcccatttgtccagttaacatggttacgatgtggaat
ggctacagtctactgtacatggaggggcaagggaaagcacgcccacaagacctgggtcgg
gccgggtcctgtttgaggatcttcagcaccatgcccttctcctactgcaacatggccgcc
tgtaactacgccagccgcaacgacaagtcctactggctgtccaccacggcggccacgccc
atgatgcccgtatcgggcgcggagatccggcagcatgtcagccgctgcgtggtgtgtgag
gccccatcccctgccgtggctgtgcacagccaggagcccagcacacccccctgtccctca
cggtggaggagcctgtggactgggtactccttcctcatgcaccaagggggcgggcagtct
ctgacatcaccgggcagctgcctgagggacttccgctcccagccctccattgagtgccag
ggcccgcgcggtacgtgtcactacttcaccaacgcctacagcttctggctgacccgcgtg
ggcgcggccgagcagttcagccccgcccccgcgtccaacacgctgaaggaggcgtggcag
cagaggcagaccaccagccgctgcaatgtctgcataagggagtga
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integrated database retrieval system