Conger conger (European conger): 133128975
Help
Entry
133128975 CDS
T10633
Name
(RefSeq) collagen alpha-1(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133128975
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133128975
09142 Cell motility
04820 Cytoskeleton in muscle cells
133128975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133128975
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133128975
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133128975
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133128975
Hyaluronan
Extracellular matrix or blood plasma proteins
133128975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
133128975
NCBI-ProteinID:
XP_061098796
LinkDB
All DBs
Position
1:complement(63260026..63319220)
Genome browser
AA seq
1010 aa
AA seq
DB search
MNITWAMTLLLLVNGAHSNKRKQIEEFYDCPVDVYIVLDTSESVALRAKPYGSFVEKIKK
FALDFVDQLSNRYYRCDRNLMWNVGVLHYSDEVKIMSELISLQTTIGKVQLKRAIQDIRY
IGRGTHTDCAISVATGQLMTGTSPFNRNKYMVVVTDGHPSDGYKEPCGSINYVVTEARGM
DIKIFAVAITPDHLENRLAAIATDVQYRYNLSATSDNPSVVRDTIKTILSTIYDDSETLC
CSYECKGARGPPGPPGEEGETGTPGRQGVAGKPGGMGSKGVTGDQGPPGHTGEKGDQGST
GDKGPRGASGQRGEKGHNGIDGKDGPMGESGSAGLQGCKGNDGMEGYPGPPGQKGDLGSF
GEPGQKGERGSPGIAGESGVSGVTGAKGDSGPVGVRSNDGDRGDDGDIGRTGAPGAMGKK
GEIGIRGPPGIRGVQGDKGDPGPIGAQGHEGPSGEIGDAGLVGVRGLKGYKGEPGSLGLP
GTTGSRGQPGSTGDAGPMGERGDNGAQGQGQPGYAGFQGFPGVRGTPGPKGIRGFPGLKG
DAGQPGDRGNDNDVPGKEGASGPKGYPGLPGENGAPGPVGHPGADECEILEVIQKLCSCC
ECECGAVKLLFVLDSSESVGLQNFTLEKEFIIRIINKITKFSKNKNEPGSRVGVVQYSHE
GTQELVSMDDPNITSLSQLKRSVKNMRWIAGGTYTGEALDFARRAFDSSKLSSKVAIVLT
DGRSDTRDSKPLSSLCNLPNVRVVGIGIGDIFRRGSHATMLQEITCLGMARPGLYLNITD
HSQLVEEAFLNNVTGYICQDKKCPDYSCPATFQGRTDIVFMLDGSSSVGRRNFERTRDYV
ANVAGMLLSSNPVGDLRLSIVQYSDTKQQRVEVPFTSQVMDVQARLSSIRYMDKATDLPA
ALAFLNSGIQWDGQPNVRRKVVVFTDGRSKPSARAQIPRAAATTLSQKMVLLALTVGDTF
DEMGVCQLVTGEADNFDYRIVDSLVYRVVRYTDLAQTVAMRSLIRKVSKA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcacctgggccatgactctgctgctgcttgttaatggtgcccattccaataaa
aggaagcaaatagaagaattttatgactgccctgtggatgtttacatcgttttggatacc
tcagagagtgtggccctcagagccaagccatatggatcttttgtcgaaaagataaaaaaa
tttgctcttgattttgtggaccagctcagcaacaggtactaccgttgtgatcgcaacctg
atgtggaacgtaggagtgctacattacagcgatgaggtgaaaatcatgagtgagctcatc
agcttgcagactaccattggtaaagtccagttgaagagagccatccaggacatccgctac
attggaagggggacccacactgactgtgccatttctgtggcaactggacagctgatgaca
ggaacctctcctttcaatagaaacaaatacatggtggttgtgactgatggccacccatct
gatggctacaaggagccctgtggcagcatcaactatgttgtgactgaagccagaggaatg
gatataaaaatatttgccgtcgccatcacaccagaccatctggaaaacaggctggctgcc
attgcaacagatgtccagtacagatacaacctgtctgcaacaagtgacaatccatcagtc
gtcagagataccatcaaaaccattctgtccaccatttacgatgattcagagactttgtgc
tgctcatatgaatgcaagggtgctagaggaccccccgggccaccaggtgaagagggtgaa
acgggaacaccaggaagacagggagttgctgggaaacctggtggtatggggtcaaagggt
gtcactggggaccaaggacctccaggtcacacaggagagaagggtgaccagggttccaca
ggagataagggtcctagaggagcttctggacaaaggggcgaaaagggacataatggaatt
gatggaaaagatggtccaatgggggagtctggttcagctggtcttcaaggttgtaaagga
aatgatgggatggaggggtacccaggtcctccaggacaaaaaggtgaccttggctctttt
ggagaaccaggacaaaagggtgagaggggatctcctggaatagcaggagaatccggtgtt
tctggtgttactggagctaagggagacagtgggcctgttggggtaagaagtaacgatggg
gatagaggtgatgatggggacattggcaggactggcgcacctggtgcaatgggcaagaag
ggggagattggtatcagagggccccctggaatcagaggagtccagggggataagggtgat
cctggtcccattggagctcaggggcatgaggggccatctggagaaataggcgacgcaggt
cttgttggtgttcgtggtctgaagggttacaaaggggaaccgggttctctcggacttccg
ggaaccacaggttctaggggacagccaggctctacaggagatgcaggccctatgggtgag
agaggggacaacggtgcacagggtcaaggacaacctggatacgcgggtttccagggattt
cctggtgtgcgaggcactccaggtcccaagggaatcaggggtttccctggattgaaggga
gacgcggggcagccgggtgaccgaggcaatgataatgatgtgcccggtaaggagggagcc
agtggacccaaaggttatcctggtttaccaggggaaaatggggcaccaggacctgtggga
cacccgggggcagatgaatgtgaaatactggaagtgattcagaaactctgctcttgctgt
gaatgcgagtgtggagcagtgaagctgctgttcgtgttggacagctcagagagcgtgggt
ctacagaacttcactctggagaaggagttcatcattcgcatcatcaacaagatcaccaag
ttcagcaagaataagaatgagcctggttcacgagtgggtgtggtacagtacagccatgag
gggacccaggagctggtgtccatggatgaccccaacattacctctctgtctcaacttaaa
agatcggtgaagaacatgcgctggattgctggaggcacgtacactggggaagccctagac
tttgcacgccgggcctttgacagctccaagctgtccagtaaggtggccattgtgctgaca
gacggcaggtcagacacccgggactccaagccactgtcctctctctgcaatttgcccaat
gtcagggttgttggcattggcattggggatatcttccgcagaggttctcatgccaccatg
ctgcaggaaatcacctgcctgggaatggcccggcccggcctgtacttgaatatcactgac
cattcccagcttgtggaagaggccttcctcaacaatgttactggttatatatgccaagat
aagaagtgtcctgattattcctgtcctgctacatttcaggggcgcacagatatcgtcttc
atgcttgacggatcttccagtgtgggcaggaggaattttgagagaaccagagactatgtg
gcaaatgtggcgggcatgctgctatcctcaaacccagtaggggaccttcggctgtccatc
gtacagtacagtgacaccaaacagcaaagggtggaggtccccttcaccagccaagtgatg
gatgtgcaagcccgcctttcttccatacgctatatggacaaggccaccgacctaccagct
gctttggccttcctgaacagtggtatccagtgggatggacagcccaatgtccgtaggaag
gtggttgtcttcacagatggacgatccaaaccctctgcccgtgcccaaattcctagagca
gcagccaccacactgagccagaagatggtactgctggccttaactgtgggggacactttt
gacgagatgggagtttgccagctggtgactggagaagcagacaactttgactatcgcatt
gtggacagtcttgtttaccgggtggtacgctacactgacctggcccagacagtagctatg
cggagcttaataagaaaagtatcaaaagcctag
DBGET
integrated database retrieval system