Conger conger (European conger): 133129177
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Entry
133129177 CDS
T10633
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04137
Mitophagy - animal
ccog04140
Autophagy - animal
ccog04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133129177
04137 Mitophagy - animal
133129177
04148 Efferocytosis
133129177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133129177
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
133129177
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
133129177
NCBI-ProteinID:
XP_061099066
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Position
5:complement(25690728..25706648)
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AA seq
734 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARCRRGQESEVFYELAHELPLPHNVSSHLDKASIMR
LAISFLRMRKLLDGDKEPESGPESDLDCQLNGFYLKALEGFFMVLSEDGDMVYLSENVSK
CMGLSQLDLTGQSIFDYAHPCDHEEIRDMLIHRTGPSKKAKEPNTERSFFLRMKCTLTSR
GRTVNIKSSTWKVLRCSGHIRMYEESCDSGENDCGHKEPPIPYLILICEPIPHPSNIEVP
LDSKTFLSRHTMDMKFSYCDERITELLGYEPEELLDRSVYEYYHALDSDHLTKTHHDLFA
KGQVTTGQYRLLAKKGGFVWVETQATVIYNNKNSQPQCVVCVNYVLSGVEESELVLSLRQ
TKTDVEPEPEMEGILGSPEALSPEADMLKLFTTQAEAEREDSLYDQLKAEPEALTLLAPA
AGDTIISLDFTCPDSDDQVLKEVPLYNDVMLPASSVKRAPGVAPGLLSGLLDTKHKPGSR
GFPPAVAHALDCPGSSTPSSGHQTPEPGSPMGYCFQVDSDLSEFKLDLVEKGFAMDTEAK
NQFSSEAMGDMDLEMLAPYISMDDDFQLRSLSLDEPQAEAPATGKQEARAPSPLHLLHDV
CTSPTPVPLEPADAKRALSLGSLLSPPAPQTTRRKRKLPDPPLPKASRLGALLLEVAHPA
AEAGKKVKVLESSMSEAFSSHKTFLLLPSDVPNRLLGSGLPQLTRYDCEVNAPVGGRQHL
LQGEELLRALDQVI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatacaggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tctcgcgacgcggcacgatgccggaggggccaggagtcggaggtgttctacgagctagcg
cacgagctgcccctgcctcacaatgtctcctcccacctggacaaggcctccatcatgaga
ctcgccatcagcttcctgcgcatgaggaagctgctcgacggcgataaagagccagaatcg
ggacccgagtcggacttggactgccagctgaacggattttacctgaaggcgctggagggc
ttcttcatggtgctgtctgaggacggggacatggtttacctgtctgagaatgtcagcaag
tgcatgggtctctcccagcttgacctgaccggccagagcatcttcgactatgcgcacccc
tgtgaccatgaggagattcgtgacatgctcatacacagaacagggccctcaaagaaagcg
aaggagccgaacacggagcgcagcttcttcctgcgcatgaaatgcactcttaccagcaga
gggcgcaccgtcaacatcaagtcctccacatggaaggtgctgcgttgctcgggccacatc
cgtatgtatgaggagagctgtgacagcggagagaatgactgtggtcataaagagccgcca
atcccatacctgattctgatctgcgagcccatcccacatccctccaacatcgaggtcccg
ctggacagcaagaccttcctgagccgccacaccatggacatgaagttctcctactgcgac
gagaggatcacagagctgcttggctacgagccagaggagctgctggaccgctctgtgtat
gagtactaccacgccctggactcagaccacctcaccaagacgcaccatgacctgtttgcg
aagggccaggtcaccacagggcagtatcgcctgctggctaagaagggaggctttgtgtgg
gtggagacccaggccaccgtgatctacaacaacaagaactcccagccgcagtgtgtcgtg
tgcgtcaactacgtgctcagtggtgtggaggagagcgagctagtgctgtccctgcggcaa
accaagaccgacgtggagccggagccggagatggagggcattctggggtccccggaggcc
ctcagccctgaagctgacatgctgaagctgttcaccacgcaggcggaggccgagagggag
gacagcctgtacgatcagctgaaggccgagccggaggccctcaccctgctggcacccgct
gccggggacaccataatctctctggacttcacctgtccagactcggacgaccaggtgctg
aaggaggtgcccctctacaacgatgtcatgctgccagcctccagcgtgaagcgggccccc
ggcgtggcccctggcctcctgagcggcctgctggacaccaagcacaagcccggctcccgg
ggattcccccccgctgtggctcacgccctggactgccctggctcctccacacccagctca
ggccaccaaacgcccgagcctggcagtccgatgggctactgcttccaggtcgactccgat
ctctctgagtttaagctggacctggtggagaaggggtttgccatggacactgaagccaag
aaccaattttcctcagaggccatgggggacatggacctggagatgctggccccctacatc
tccatggacgatgacttccagctgcgctcgctctcactggacgagccccaagcggaggcc
cccgccacgggcaagcaggaagcccgcgccccctctccgctgcacctcctgcacgacgtg
tgcacctcccccacccccgtgcccttggaaccggccgacgccaagagggctctctctctg
ggcagtctgctttctccgccagccccacagaccaccaggcgcaagaggaagctcccagac
ccgcctctgcccaaagccagcagactgggtgctttgctcctggaagtggcacatcctgca
gctgaggcagggaagaaggtgaaggtgctggaaagcagcatgtcagaggcgttctcttcg
cacaagaccttcctgctgctgccttccgatgtgccgaatcggctgctgggctctggcctt
ccgcagctgacacgttacgactgcgaggtgaacgcccctgtggggggccgccagcacctg
ctgcagggggaggagcttttgcgggcgctggaccaagtcatctga
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