Conger conger (European conger): 133129438
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Entry
133129438 CDS
T10633
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
ccog Conger conger (European conger)
Brite
Spliceosome [BR:
ccog03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133129438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
PPTA
TPR_19
Motif
Other DBs
NCBI-GeneID:
133129438
NCBI-ProteinID:
XP_061099520
LinkDB
All DBs
Position
5:26821347..26834347
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AA seq
1003 aa
AA seq
DB search
MEESEQLFSGVAMTGMLDVDPTGGFGSLSMEAIGHSFLTDSLISTQDPVLIQDSDTASSP
LPETVEALLGQGQVQDRQLEQHDQVQLESLVQDPVEHLQPLEHDLLEQSESFKQDLLQFT
EPLEQDQVYHAEPIQTDHVQFPGPMEPDTEMCHSEPLQHDQEDQVFGDPLQQEEMYHSEP
VQEDHVEFPDPIEENSDMVHSELLQQDQEELVKPFVKEQMEDHVRLPEPLGPDQVYHSEL
LQQDQEEQVELLAKQQVEDLVGFSLHQDQVCKSELLQQSQEEVVEPLAKEDLGLPEPLSQ
DLVYQSELLEQSQEVQVEPLAKEQMEDQVVFPEPLSQDQGHQSELLQQDQLEQSEPTEKD
LEECLEQSEQVSAQRVDSPEPGSPTNMELEETSKDGVEEEDPAPVLEAPFPAEFEKYYKA
VEENPEDFTAWTYLLQYVEQESHIGAARKAFSSFFARYPYCYGYWKKYADMEKRLDSTQM
ADEVYRCGLQAIPLSVDLWLHFVGFLRETADPSDNSTESRVRAAYEHAVLAAGTDFRSDR
LWESYINWEAELGNLAHVTAVYDRILGIPTQLYSHHFQRLKEHVQNNLPKHFLSEEEFIQ
LRAELAKVGGLSGEEATPSDDMPSGTEDLADPAKRVTEIENMRHRVIEGRQEVFNHNEHE
VSKRWTFEEGIKRPYFHVKALEKTQLSNWKEYLDFEIENGTPERVVVLFERCLVACALYE
DFWIKYAKYLENYSIEGVRHVYKKACTIHLPKKPTLHLLWAGFEEQQGNIEEARGILKAL
EEAVPGLAMVRLRRVSLERRHGNMEEAESLLQDAIRNGKNVGETSFYSIKLARQLLKVQR
CLEKARKVLLEAIERDKMSPKLYLNLLELEYSGDVKQNEKQILSCFDRALNSPLPLESRL
AFSQRKVEFLEDFGCDINTLVSAYEEHEKISEAHASTKRKAENGSQEPEPKKARTEDPSM
GTGQMMPDMLPNHSAYNYNYNWYQQYNYQNPWGYGQYYPPPPT
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctgagcagctcttttctggagtggccatgacaggcatgctggatgtggat
cctacaggaggcttcggctctttaagcatggaagctattggacacagcttcctgacagat
tccctcatctctacccaggacccagttctgatccaggactctgatacagcttccagtccg
ctgcctgaaaccgttgaggcattgctgggccaagggcaggtccaggaccggcagttggaa
caacatgaccaggtgcagttggagtccctggttcaagatcctgtggagcatctgcagcct
ttagagcatgaccttctagaacagtcggagtccttcaaacaggatctgttgcaattcaca
gaacccttagaacaggatcaggtgtaccatgcagaaccaatacaaacggaccatgtgcaa
tttccaggcccaatggaaccggacaccgagatgtgccactctgagccattacagcacgac
caggaggatcaggtgtttggagaccccttacaacaggaagaaatgtatcattcagaacca
gtacaagaagaccatgtggaatttccagacccaatagaagaaaacagtgatatggtacat
tctgagctgttacagcaggaccaagaggagttggtgaaaccctttgtaaaagaacagatg
gaagaccatgttcgccttccagaacctttaggcccggatcaggtgtaccattctgagcta
ttgcagcaggaccaggaggagcaggtggaactcttggcaaaacagcaagtggaagacctg
gtgggcttttcattacatcaggatcaggtgtgcaagtcggagctattacagcagagccag
gaggaggtggtggaacccttagcaaaagaagatttgggccttccagaacctttaagtcag
gatctggtgtaccagtcggagttattagagcagagccaagaggtgcaggtggaacctttg
gcaaaagaacaaatggaagaccaggttgtctttcctgaacctttaagtcaggatcagggg
caccaatcggagctattgcagcaggatcagttggagcaatctgaacccactgaaaaggac
ctagaggagtgcttggaacagtccgagcaggtttcagcccagcgagtagattctccagag
cctggaagcccaaccaacatggagctggaggaaacatcaaaggacggtgtggaggaggag
gatcccgcccctgttttggaagccccttttcctgcagagtttgagaagtactacaaggcg
gtggaggaaaacccagaggacttcaccgcgtggacatatctgctgcagtatgtggagcaa
gagagtcacataggggctgcccgaaaggccttcagctccttcttcgctcgatacccttac
tgctacggatactggaagaagtatgcagacatggagaagaggctggacagcacacagatg
gctgatgaggtgtaccgatgtgggcttcaggccattcccctcagtgtggacttgtggctc
catttcgtcggcttcctgcgggagactgcagaccccagtgacaacagtacagagagtcgc
gttcgagcggcgtatgagcacgcggtgctggcggccggcacagatttccgctccgaccgt
ctctgggagtcctacatcaactgggaggcggagctggggaacctggcgcacgtcaccgct
gtctacgaccgcatcctgggcatccccacccagctctacagccaccacttccagaggttg
aaggagcacgttcagaacaacctccctaagcacttcctttcagaagaggagttcatccag
ctgcgagcagagttggctaaagtgggtgggctcagtggagaggaggccacacccagtgat
gacatgccctctggcacagaggatcttgcagacccagcaaagcgtgtgactgagattgag
aacatgcgacacagggtgatagagggacgccaggaagtattcaatcacaacgagcacgaa
gtcagcaagcgctggacctttgaggaagggataaaacggccttacttccacgtgaaggcc
ctagagaagacccagctgagcaactggaaggagtacctggactttgagattgagaacggg
accccggagagggtggtggtgctgtttgagcgatgcctggtcgcctgtgccctctacgag
gacttctggatcaagtatgcaaagtacttggaaaactacagcatcgagggtgtgagacat
gtttacaagaaggcctgtacgattcacctccctaagaagccgacccttcacctgctgtgg
gctgggtttgaggagcaacaggggaacatagaagaggcccgggggatcctgaaggccttg
gaggaggcggttccgggcctggctatggtgcgtctgcgccgggttagcctggaacgtcgc
cacggcaacatggaggaggcggagtccctgctgcaggacgccatcaggaacgggaagaac
gtgggcgagacgtctttctactccatcaagctggctcgccagctactcaaggtgcagcgg
tgcttggagaaggctaggaaagtactgctggaggccatcgagagggacaagatgagcccc
aagctgtacctgaacttgttggagcttgagtacagcggtgatgtgaaacagaatgagaag
cagatcctctcctgctttgaccgggccctgaacagccccctgccacttgagtctcgcctc
gccttctcccagcgcaaagtcgagtttctcgaagactttggctgtgatatcaacacgctt
gtgtctgcttatgaagaacatgagaagatttcggaggcacatgcgtctacaaagcgaaag
gcggaaaatggttcacaagagccagaaccaaagaaagcacgcacggaggacccctccatg
ggcacaggtcagatgatgccagatatgctgcccaaccactccgcatacaactacaactac
aactggtaccagcaatacaactaccagaacccatggggctatggacagtactaccctcct
ccccctacgtga
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