Conger conger (European conger): 133130925
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Entry
133130925 CDS
T10633
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133130925 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133130925 (fip1l1b)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133130925 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
133130925
NCBI-ProteinID:
XP_061101914
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Position
6:662922..678758
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AA seq
554 aa
AA seq
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MSAEEAEKTTTATTDVSAGDEEEEWLYGDENENNKEEEDEEEAKLSAAVSAPVPLPVTEE
ATGNGVAKQDTAEENEDSESDSDDDEDDVRVTIGDIKTGAPQYAAYGATPVNLNIKTAGR
AYGSVGSKLKGVDLEAPGSINGVPVLEVDLDSFEEKPWRKPGADLSDYFNYGFNEDTWKS
YCEKQKRLRMGLEVITVTSVASKITVQQGRTGNSEKDISLPPHQPKPDFPSPSNLYKSTL
STSRISPPQWAAGGAPAQDMSFYTKVTGSIDVIGGQTATISRVEGRRRHNIEGNNIQVIS
EHSSSDAETPAKMPPFFPPGPLPPNIPPPPFLPPPPNVSSAPPLIPPPRIPITVPPPGFP
PPPGGPPPSLIPTLDSGHPGGYDGRAVPPYPFSTGGYPPPMTGTVSSWPSLMDTSKSWDY
YPRREKEREREKERERERPRERGHDRERERDHSPAPLAYNSDEERYRYREYAERERSYRA
SREKEERHRERRHRDKEERHKSSRSSSSRRRHDSEEGDAHRRHKHKKSKRSKEGKEASED
HAANQESAEGGAME
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgaagaagcggagaaaacaacgaccgctacgactgatgtgagcgccggggac
gaggaggaggaatggctgtacggagatgaaaacgagaacaacaaggaggaggaagatgaa
gaggaggcgaagctgtccgccgctgtcagtgccccggtcccgcttccagtgacggaggaa
gccacgggaaacggcgttgccaagcaggacacggccgaggagaatgaggacagtgagagt
gacagtgatgatgatgaagatgatgtacgtgtcacaattggagatattaagactggagca
ccacagtatgcggcgtatggagcaacacctgtcaacctgaatataaagacagcgggaaga
gcttatggatcagtgggctccaagctgaagggggtggatctggaggctccagggagcatc
aatggggtccctgtgctagaggtggacctggactcctttgaggaaaaaccctggaggaaa
ccaggtgctgatctctcggactactttaactacggctttaacgaggacacgtggaagagc
tactgtgagaagcagaagcgtctgcggatggggttagaggtcatcaccgtcacctcggtc
gccagcaaaataaccgttcagcagggccgaaccgggaacagtgaaaaggacattagctta
cccccccaccagcccaaaccggacttcccctctccaagcaacctctacaaatctacactg
tccacatcccggatttccccccctcagtgggctgctgggggtgctcctgctcaggacatg
tctttctatacgaaggtgactggctccattgatgtaattgggggacaaacagccaccatc
agtcgtgtggagggacgacggcgtcataacattgaagggaacaacatccaggtcatatca
gagcactcctcttcagatgctgagactcctgctaagatgccacctttcttccccccgggg
cccctcccccccaacatcccccccccccctttcctgcccccaccccccaatgtcagctcc
gcacctcctctcatcccaccaccaaggatacccatcactgtgcccccaccaggtttcccc
cctcctcctggtggaccccctccctctctcatccccactttggacagtgggcatcctggg
gggtacgatggccgtgctgtcccgccataccccttctccactggtggctacccacctcca
atgacggggacggtgtcctcctggcccagtttgatggacacctccaagtcctgggattac
tacccccggcgcgaaaaagagcgtgagcgggagaaggagcgggagcgggagcgacctcga
gagcggggtcacgaccgcgagagagagagagaccacagccctgctcctctggcttataac
agtgatgaggagcggtatcggtatcgggagtatgcagagcgggagaggagctatcgtgcc
agcagggagaaggaggagcgtcaccgagagaggagacaccgagacaaagaggagagacac
aagtcctcacgcagcagcagcagcaggaggaggcatgacagtgaggagggcgacgcccac
aggcgacacaagcacaagaagagcaagaggagcaaggagggcaaggaggccagcgaggac
cacgcagccaatcaggagagtgcagagggcggggccatggagtga
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