Conger conger (European conger): 133131074
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Entry
133131074 CDS
T10633
Symbol
limch1a
Name
(RefSeq) LIM and calponin homology domains-containing protein 1a isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
133131074 (limch1a)
Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
133131074 (limch1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
133131074
NCBI-ProteinID:
XP_061102176
LinkDB
All DBs
Position
6:19107700..19154528
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AA seq
1811 aa
AA seq
DB search
MASPGCDIGRNSHQHQHQQSESAPEPAFQEAQKWIEEATGRRFGDRDFRSSLENGILLCE
LLSCIRPGLVKKINRLPTPIAGLDNLCLFLRGCGSLGLKGTQLFDPGDLQDTSVRANLRG
SDCSRKLKNVLITIYWLGKAAQNSTSYSGPTLDLKVFEGLLSQMKKDSEDTETLRGSIGD
SGYIDSGEAEHSESLSPPHGRGDSFDSLDSLGSPSPDVLIPACSEGRGSDSECDGPRRLP
DVQKDDMLTRRTICAEPHPTAPFNQYLPNKSSTSAYGPAPLRKKRPDPEEVQTSGSTATS
PIGGEQPISRVPCMRLGGAQVEGGAIRQKTVTWGGESRAEPALWEGPEEQEMRRMQKLEK
AGIRVLPAAVRYLSLKHVAEEEPMEEATPPCPSIVLRKASDFLQQAEQAWASDEEEDDEG
RRLPDVQKDDLASRRARMSHSAPRVHHFLPSASDGHVREEWEGLRRAWQRAALSESEAHT
APCKEEEEQEGGRGPQALPNLEKDDLSRRRAQSRPPPRAPPQPFINASITPSDLQTWQRL
KMSTEPSETPPPEMSHAIPCKEEEEQEGGRGPQALPNLEKDDLSRRRAQSRPPPRAPPQP
FINASITPSDLQTWQRLKMSTEPSEEPPVCQACLQKGSLPSEQDHLLPSEQEDHALRPVP
AQHSAPSGRPRFVHFGPVTEMDQQLWERLRIAQPGQEEELGVGPGSEAQTLRRLLASAAV
ATPTIGLSSQLTDKPASADVSDGDSAPLAAADCALDQTSLYEQACRENQALDQKLAHYKE
REEEEDDEEAGEREGRQPDLQKDDMLVRRTGVCQKPGTGSSFNRFLPLPGSFRGTPKIKT
EALPYTPKTKAEALPSTPQTKTDPPPDIPKIKTEGLPSTPQTEMDTLPDIHKIKTEGMSD
TTKTKMEALPDNMQREPFLDSSKSRVKMNLSKPQTRQELSVATSVLHHPDPQKDRINHPD
PEKRIAASAKPVPGVAEMIQVATAYYGSPDDYNSDDDDEYEEESHPDLGKDDMHARRTGQ
FQKVPGGGVTPAINPFLPVPGSVKFKSTPTPTSSPSSPYVKPLESEPVSDAHSSSSLFSA
ELNCPPVPAATRTTATTTTSTSMTSPITLSPKHSAAPSAPPLPLSSTLQSEPRRRPSWLD
DLPPMSVSMTDMRCEETAEQALGEARQELMQSQYNQHREEESQWQDDLARWKNRRRTASQ
DLIKKEEERKMMERLMVRDDRASQRRKSIKTYKEIVEEKERREQELHDAYRSACSPEEAA
TVLRRYAQRFTLSDAALERLQLSKPAELAAPGPAPSAGPTPAAPGPAPSAGPTPAAPGPA
PSACPTPVAPGPAPSPVATGPAPSLGLSSSSGPTPSQTTDSCSVTTTLIPKFSATLETST
MAPVQAYAPSCTAPSKPVPLLTPKPYSQPSSSQRGSISVKAPPTPVQAPVAQRKDTPPSQ
PDQEATPSHPRPLPTCHRALGVSQGVYGPAQSPAEPTEGGAHTPGSPLLPEGREKDSSSQ
VDHWSWDPDEERKRQERWQQKQELLLQERYEQEQEKLKREWEKAQMEVQEEERRHHEEER
RILEETMPSLSPRSSALSSPLRGGLSPPPGPQDLTLPSPANMELKQEQPVQAVSPEEALM
GQKDRSETHRVSLPLTPVLPELNAAPHQNGQSLPAEPSRSTTPQQQPFNSPWSSKQAQSA
QQEAEKMQKKTASLDRNLNPQPGRAKRCGSCENVATNSSPANSSSIHPQSPNRSVSGRKL
CSSCGLPLGKGAAMIIESLHLCFHIQCFTCGVCKGQLGDTSSGTDVRIRNGLLNCHQCYV
KSRAAGQPTIL
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcccggttgtgatattggtcgaaattcacaccaacatcagcatcagcagtct
gaatcggctccagaaccagcttttcaagaagcgcaaaaatggatcgaggaggcgacgggc
cggcgctttggtgacagggatttcagaagcagcctggagaacgggattctgctctgcgag
ctcctcagctgtattagaccaggacttgtgaaaaagataaaccggcttcccactcccatc
gctggactggataacctgtgcctgtttctgcgggggtgtggaagcctggggctgaagggc
actcagctgtttgatcctggagacctgcaggacacctctgtacgtgccaacctcaggggt
tcagactgcagcagaaagctgaagaatgtattaatcaccatatactggctggggaaggcg
gctcagaacagcacttcctacagcggccccaccctggacctgaaggtgttcgaagggctg
ttgtctcagatgaagaaggactctgaggatactgagactctgaggggcagtatcggggac
agcgggtacattgacagtggtgaggcggagcacagcgagtctctctctcccccccacggc
cggggcgactcctttgacagcctggactctctggggtccccctcccccgatgtgctgatc
cccgcctgcagcgagggccgtggcagtgactctgagtgtgacggaccccgaaggctgcca
gacgttcagaaggacgacatgctgacccgtcgcaccatctgcgctgagccacaccccacc
gcgcccttcaaccagtacctgcccaataagagcagcaccagcgcctacggccccgcccct
ctgcgcaagaagaggccggatcctgaggaggtgcagaccagtgggagcacagccacctcc
cctattggaggagagcaaccaatcagtcgggtcccctgtatgagactggggggggcacag
gtggaggggggagccatccggcagaaaacagtgacctggggaggggagagccgggcggag
ccagccctgtgggaggggccagaggaacaggaaatgcgcaggatgcagaagctggagaag
gcgggaatccgcgtgcttcctgctgccgtgcgctacctcagcctcaaacacgtggcagag
gaggagccaatggaggaagccacacccccttgccccagcatcgtactgcgcaaggccagc
gacttcctgcagcaggcagagcaggcctgggcctctgacgaggaggaggacgacgaaggg
cgccggctgccggacgtgcagaaggacgacctggcatcccgccgtgccagaatgagtcat
tcagctcccagggtgcaccacttcctgccctcggccagcgatggccatgtcagggaggag
tgggaggggctccgtcgggcgtggcagcgggcggccctcagtgaaagtgaggctcacacc
gccccctgtaaagaggaggaggagcaggagggggggcggggcccccaggccctccccaac
ctggagaaggacgatctgtcccgccggagagcgcagagccgacccccccccagggccccc
ccacagcccttcataaacgcctccatcaccccctccgacctgcagacgtggcagcgcctc
aaaatgtccaccgagcccagtgagacccctccccctgagatgtcccatgccatcccctgt
aaagaggaggaggagcaggagggggggcgggggccccaggccctccccaacctggagaag
gacgatctgtcccgccggagagcgcagagccgacccccccccagggcccccccgcagccc
ttcataaacgcctccatcaccccctccgacctgcagacgtggcagcgcctcaaaatgtcc
accgagcccagtgaggagccccctgtgtgccaggcctgtctgcagaagggctccctgccc
tcggagcaggaccacctgctgccctcggagcaggaggaccatgccctgcggccggtccca
gcccagcacagcgccccctctggccggccacgctttgtgcacttcggccctgtgaccgag
atggaccagcagctctgggagcggctccgcatcgcccagccggggcaggaggaggagctg
ggggtggggccggggagcgaggcccaaaccctccgccgcctcctcgcctcagcggctgtg
gccacgcccactattggcctgagctcccagctgactgacaagccggccagtgccgatgtg
agcgatggagactcggcccccctggcagctgcagactgtgcgctggaccaaacatcgctg
tacgagcaggcgtgccgggagaaccaggctctggaccagaagctggcccactacaaagaa
cgtgaggaggaggaggacgatgaagaggcaggggaaagggaggggaggcagcctgacctg
cagaaagatgacatgctggtgcgaaggactggggtttgtcagaagcctggtacgggctcc
tccttcaacagattcctccctctgccggggtccttcagggggactcccaaaatcaaaacc
gaggccttgccctatacccccaaaaccaaggccgaggccctgccctctaccccccaaacc
aagacggatccacccccagatatccccaaaatcaagacagagggcctgccctctaccccc
caaactgagatggatacacttccagatatccacaaaatcaagacagagggcatgtcagat
accaccaaaactaagatggaggccctgcccgataacatgcagagagagccttttctggac
agctccaaaagtagggtgaagatgaacctcagcaaaccccaaaccagacaggagctcagt
gttgccacttcagtgcttcatcacccagacccccagaaagacaggataaatcacccagac
cccgagaaacgcattgctgcctctgccaaacctgttcctggagtagcagagatgatccaa
gtggccactgcctactacggcagtcctgatgactacaacagtgatgatgatgatgagtat
gaagaagagagccatccagatttggggaaagatgacatgcatgcacgcagaactgggcag
ttccagaaagttccagggggtggtgttacaccagccatcaatcctttcttacctgtgcct
ggatctgtgaaattcaaatctacgcctacacccacctccagtccctcgtctccttacgtc
aaacctttggagtcggagccagtgtcagacgctcacagcagctcaagcttgttctcggca
gagctaaactgcccacccgtgcctgctgctaccaggacgactgctaccacaacaacctcc
acctccatgacgagtcccatcaccctctccccaaaacacagcgctgccccctctgcaccc
cccctgcccctctccagcaccctgcagagcgagccccgccgcagaccctcctggttagat
gatctccccccaatgagcgtgagcatgacggacatgcggtgtgaggagacagcggagcag
gcccttggcgaggcgcggcaggagctcatgcagagccagtacaaccagcaccgtgaggag
gagagccagtggcaggatgacctggctcgctggaagaaccgcaggaggactgcgtctcag
gacctgataaagaaggaggaggaaaggaagatgatggagagattgatggttagagatgac
agagcgtcccaacggagaaagagcatcaagacctacaaggagattgtggaggaaaaggag
cgcagagagcaggagctgcatgatgcgtaccgcagcgcgtgttcccctgaggaggctgcc
accgtgctgcgtcgctacgcccagcgcttcaccctcagcgacgccgctctggagagactg
cagctgtccaaaccggcagagctcgctgcccctggccctgccccctcagctggccccacg
cctgcggcccctggccctgccccctcagctggccccacgcctgcggcccctggccctgcc
ccctcagcttgccccacgcctgtggcccctggccctgccccttcccctgtggccactggt
cccgccccctcacttggcctctcctcctcttcaggccccaccccttcccagaccacagac
tcctgctctgttaccactaccctgattcctaagttctctgccacactggagacttcaact
atggcccctgtacaggcctacgccccatcctgcaccgcccccagcaagcctgtgcccctt
ctgacacccaaaccatacagccagccctcgagctcacagagaggcagcatttcagtcaag
gctcctcccaccccagtacaggctcctgttgcccagaggaaggacacgcctcccagccaa
cctgaccaggaagccacaccctcccaccccaggcccctgcccacatgccatagggccctg
ggtgtgtctcagggtgtatatggaccagcacagagcccagctgagcccacagagggaggg
gcccacacacctggctctcctctgctgccagagggcagggagaaagacagctcgtctcag
gtggatcactggtcctgggatcctgatgaggagcggaagaggcaggagagatggcagcag
aagcaggagctcttgcttcaggagcggtatgagcaggagcaggagaagctgaagagggag
tgggagaaagcgcagatggaggtgcaggaggaggagaggaggcaccatgaggaggaaagg
aggattttggaggagacgatgccctccctgagcccccgctcctcagcattgtcctccccc
ctccgtgggggcctgtccccacctcccggcccccaggacctcaccctcccatcgccagcc
aacatggagctaaagcaggagcagcctgtgcaggcggtgtcaccagaggaagcactcatg
ggacagaaggaccgcagtgagacacacagagtctcgctgcccctgaccccagtcctgccg
gagctgaatgcagctcctcaccagaacggccagagtctccctgcagagccgagcagaagc
acaacgccccaacaacagcctttcaactcaccctggagcagtaaacaggcccagagtgca
cagcaggaggcagagaagatgcagaagaagactgcgtctttagatcgcaacctcaaccca
cagcctggaagagcaaagaggtgtggatcttgtgaaaatgtagcgacaaactcatcacct
gcaaactcatcttccatccatccccagtccccaaacaggtcagtgagtggcaggaaactc
tgctccagctgtgggctcccgctagggaaaggagctgctatgatcatcgagagcctccat
ctctgcttccatatccagtgtttcacgtgtggggtctgtaaaggtcagcttggggacacc
agctcagggactgatgtcagaattcgtaatggcctcctcaactgccaccagtgctatgta
aagtcccgtgctgctggccagcccaccatattgtga
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