Conger conger (European conger): 133131254
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Entry
133131254 CDS
T10633
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133131254 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133131254 (edc4)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133131254 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
133131254 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EDC4L
Beta-prop_EML_2
WD40_Prp19
WDR55
EIF3I
BNYVV_p31
Motif
Other DBs
NCBI-GeneID:
133131254
NCBI-ProteinID:
XP_061102508
LinkDB
All DBs
Position
6:42560592..42601221
Genome browser
AA seq
1407 aa
AA seq
DB search
MASNTNIDIEDATQHLRDILKLDRPGSSGDTAPVDGQKKASFNGELNGLFGADLLGAGDR
VALAESHNPELMEAQERQTILLSGDDSSTSIAISSNDVEIVASHDSCISSKARGSNKVKI
QPVAKYDWEHKYYYGNLIAVSNAYLAYAIRGANSYAMIRVLSLSTAERTLLKGFVGGVTD
LAFAHLDSTQLACMDEAGSLFVWQLTSRDGKILDEVIVHIRRPEDTPLNSNRRLIWCPFI
PEENEENPEDACQTLALLHEDRAEVWDLDILRANSTTWPVDATDLKEGFISVRGHSARIS
EGALSPDGTVLATASHDGYIKFWQIYIEGQDQPSLSLPPPHRCLHEWRPHGGKPLSCLLF
CDNHKKQDPDVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDPFNSSVMPSLKASL
DLSADYLILTDVQRKVLYVMELRQDQENGRAGFTAVSEFLLTHPVLSFGIQDVSRSRLRH
TEVLPPEEESESMTTEGTQPVESKAGVQIKLYCVHTKSLQDVQIWFQPQLVPGHALILPQ
APSQDEFGFSDPLTDVSTEGLGSDKESGRSSQSDLQGLPSLPAPADFLSPISEAKPKLMT
PDAFMTPSASVCQKIPASPGSSASSLTVVTAMSSNSDSGGARGGDELTQSPKISLDTSSS
SSTLALSTTPSGSARNSTMLIPGLEGPLPVNHLQPLPSPLPPLSLEVQVMEPLLVPQSSP
TRERSPDVISSASTALSQDIPEIASEALHRGAGAAGAGGGGGEPREDSMASAASALHLLS
PRKRNGSDPGRLALELGPGEGGERLSSTPSLLEAALSQESANAAACAEGAVSQPWPAAPD
ITRQTRSSLRESSLVECCREDLKEKHKSSPYHRHTYSLPHNDSQDASAEQSDHDDEVASL
ASSSGNCGSRSSHRLPVKDWKVSPRASPKLKRKSKKDDGDSSQTRHPDHQMTPELQEELL
VLLRSQQREMVELRQSQMELLQRLTGRMDAVQSSIMAHVEQALLGQQELDQRRMDRLIAE
GLDRNRQVQENFSQQLSQTLTNTLSNRLDKVLRDEMKKTVPQTISKSLEPITGQLSNTIA
AKLTAVEGTLKENVSKVVKSKNTTDAIGRAAAEALQGPIQAAYKEAFQSIVLPVFEKGCQ
SMFQQINDSFKQGTHEYIQQLESHLKNRKQREQDARDPLIGQLQQLVDSFQSSSDQLASN
VTASVRSEVQHQLHMIVGNLQDSILTQVQCIVKGEVGLAMKEQQALVTSSIMQAMRSAAG
TPIPTAHLDYQAQQASVLQLLQQGQLNQAFQQALSAADLNLVLYVCETIDSQQVFSQHPC
PLIQPVLLSLIQQLSTNLATRSELKISYLEDAVMNLDHGDPVTRDHMSSVLAQVRQKLFQ
FLQQDQQGPLSKRARRLMMMLQGLVTH
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaacacgaacatagatatagaagacgcgacccaacaccttcgggacatcctg
aagttggaccgacccgggagtagcggcgacacggccccagttgacggtcagaagaaggcg
tccttcaacggcgagctgaatgggctgttcggagcggatctcctgggcgccggagaccgc
gtcgccttggccgaatctcacaacccggagctcatggaagcgcaggagagacagaccatt
cttctgtctggagacgacagctccacctccatcgccatctcgtccaacgatgtggagatc
gtggccagccatgactcctgcatcagcagcaaggcccgcggcagcaacaaggtcaaaatc
cagcccgtggccaagtacgactgggagcacaagtattactatggcaacctgatcgccgtg
tccaacgcctacctcgcgtacgccatcagaggtgcgaacagctacgccatgatccgcgtg
ctgagcctgtccacggcggagcgcaccctgctgaagggcttcgtgggcggggtgacggac
ctggccttcgcccacctggactccacccagctggcctgcatggatgaggccgggagcctg
ttcgtctggcagctcaccagccgggacggcaagatccttgatgaggtcattgtgcacatc
cggaggcccgaggacacgcccctgaactcaaaccggcgactgatctggtgccccttcatc
ccggaggagaacgaggagaacccggaggacgcctgccagaccctggccctcctgcacgag
gaccgggcggaggtgtgggatttggacatcctcagggccaacagtaccacctggcctgtc
gacgctacggacctgaaggaaggcttcatcagcgtcaggggacattcagcgcgcatcagt
gaaggggctctgtccccagacgggacagtcctggccactgccagtcacgacggctacatc
aagttctggcagatctacatcgaagggcaggaccagcccagtctctccctccctccccct
cacagatgcctccacgagtggaggccccacggtggcaagcctttgtcctgccttctgttc
tgtgacaaccacaagaagcaggaccccgacgttcctttctggcggttcctgatcaccgga
gcggatcagaaccgcgagctgaagatgtggtgcacggtgtcatggacctgcctgcagacc
gtcaggttttctccagaccccttcaactcatcagtgatgcccagcctgaaggccagcctg
gacctctcagctgattacctcatcctcactgacgtgcagcggaaggtcctgtatgtgatg
gagctgaggcaggaccaggagaacggccgggccggcttcacggcggtgtctgagttcctg
ctcacacaccccgtcctcagcttcggcatccaggacgtgagccgcagccgcctgcgtcac
accgaagtgcttcccccggaggaggagagcgagagcatgaccacagaaggaactcaacct
gtggagtctaaagcgggcgtccaaatcaaactgtactgcgtccacacaaagtccctccag
gacgtccagatctggttccagccgcagctggtgccaggacacgccctcatcctgccccag
gccccctcccaggatgaatttggcttctcggaccccctgacggacgtgagcacagagggg
ctgggctctgataaggagtcagggcgcagttcccagagcgacctgcaggggctgccctcg
ctccctgccccggcagacttcctgtcccccatcagcgaggccaagcccaaactcatgacc
cccgacgccttcatgacccccagcgcttcggtatgtcagaagatccctgcgtctccgggc
agcagtgccagctctctcaccgtggtaacggccatgagcagcaactccgacagcggcgga
gccaggggcggggacgagctgacccagagccccaagatctccctggacaccagcagcagc
agcagcaccctggccctcagcaccacgccctccggcagcgcccgcaacagcaccatgctc
atccccggcctggaggggccgctgcctgtcaatcacctgcagcccctgccctcgcccctg
ccccccctctctctggaggtgcaggtgatggagcccctgctcgtgccccagtcctccccc
acccgggagcgctccccggacgtcatctcctccgcctccaccgcgctgtcccaggacatc
cccgagatcgcgtcagaggcgctgcatcggggcgcgggcgcggccggggccgggggcggg
gggggcgagccccgggaggacagcatggcgtcggccgcctccgctctgcacctcctctcg
ccccgcaagaggaacggctcggaccccggccgcctggccctggagctgggccccggggag
ggcggcgagaggctgagctccacgccctcgctgctggaggccgccctgtcccaggagagc
gccaacgctgcggcctgcgccgagggggccgtcagccagccctggcccgccgcccccgac
atcacccgccagacacgcagcagcctgagggagagcagcctggtggagtgctgtagggag
gatctgaaggagaaacacaagtcctccccctaccaccgccacacctacagcctgccccac
aacgacagccaggacgccagcgcggagcagagtgaccatgacgacgaggtggcgagtttg
gcgtcctcctcggggaactgcggctccaggtcctcccaccgcctccccgtgaaggactgg
aaggtctcgccccgcgcctcccccaaactgaagaggaagagcaagaaggacgatggagac
tcctcgcagaccaggcaccccgatcaccagatgaccccagagctgcaggaggagctgctg
gtgctgctgcgcagtcagcagagggagatggtggagttgcgtcagagccagatggagctg
ctccagcggctgacgggacgcatggacgccgtgcagagctccatcatggcgcacgtggag
caggccctgctcggccagcaggagctggaccagcggaggatggaccgtctgatcgctgag
ggactggaccggaaccggcaggtccaggagaacttctcccagcagctctcccagacgctc
accaacacgctgtccaaccgcctggacaaggtgctgcgtgacgagatgaagaagaccgtg
ccccagacgatctccaagagcctggagccaatcacggggcagctcagcaacaccatcgcc
gccaagctgaccgccgtggagggcacgctgaaggagaacgtctccaaggtcgtcaagtca
aagaacaccactgacgcgattggccgagcggcagccgaggccctccaggggcccatccag
gcagcctataaggaggcgtttcagagcatcgtgctgccggtgttcgagaagggctgccag
tccatgttccagcagatcaacgacagcttcaagcagggcacgcatgagtacatccagcag
ctggagagccacctgaagaacaggaagcagcgggagcaggacgcgcgggaccctctgatt
ggccagctgcagcagctggtcgactccttccagagctccagcgaccagctggccagcaac
gtcaccgccagcgtgcgctcagaggtgcagcaccagctgcacatgatcgtgggaaatctg
caggactcgatcctgacgcaggtgcagtgcattgtgaagggtgaggtggggctggccatg
aaggagcagcaggccctggtcacctccagcatcatgcaggccatgcgctcagccgctggg
acccccatccccaccgcccacctggactaccaggcccagcaggccagcgtgctacagctg
ctgcagcagggccagctcaaccaggccttccagcaggctctctctgcggcggatctgaac
ctggttctgtacgtgtgtgagaccatcgactcccagcaggtgttcagccagcacccctgt
cctctgatccagcctgttctcctgtccctgatccagcagctctccaccaacctggcaacc
cgctccgaactcaagatcagttacctggaggacgcggtgatgaacctggaccacggtgac
ccggtcacgcgggaccacatgagctcggtcctggcgcaggtccggcagaagctgttccag
ttcctgcagcaggaccagcagggccccctgagcaagagagcgcggcgcctaatgatgatg
ctgcagggcctggtcacccactag
DBGET
integrated database retrieval system
