Conger conger (European conger): 133132218
Help
Entry
133132218 CDS
T10633
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133132218
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133132218
09142 Cell motility
04820 Cytoskeleton in muscle cells
133132218
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133132218
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133132218
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133132218
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133132218
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133132218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133132218
NCBI-ProteinID:
XP_061103499
LinkDB
All DBs
Position
7:28040489..28101295
Genome browser
AA seq
1674 aa
AA seq
DB search
MKFGIFVLVVVLAVETTHGQQGPCVGSNCVDEGCVCNPEKGSRGRPGAVGPIGPGGQEGF
PGGQGPAGPKGERGNPGLRGLLGQKGDKGPMGVPGFSGIDGVPGTPGLEGGRGPPGPSGC
EGYNGLSGDRSPNGQPGTAGLRGVPGGKGQKGEPVYAGLGYAPRGNPGLPGLDGLFGPRG
PSGIPGPAGLRGPDGRPGASGPPGPPGPTGASGVGFKGEQGDRGDVGQPGPAAEETRLTL
RDIEHFKGQRGDPGYKGPPGLPGRPGGSGAYGYGAEKGETGIPGLPGGRGAPGYDGTPGH
PGQKGLPGDPGYGGGGSGYPGAKGVQGDPGPPGPTTFTGGGGAPGPRGEPGRSGLCGPPG
DEGPAGYPGPPGLPGLPAHGTGPALPGFPGTPGPKGEKGDPGRAAYGSPGRPGSNGSPGL
PGPPGPPGDSKCIVPTELCVRGLPGPRGPGGVPGYKGAKGELGDCRCRGVTGNGVPGNRG
PPGAAGSPGYFGSKGERGDHGYQGPAGPPGTSGVPGSGGYSGRKGEPGESFHSPNVKGER
GNQGPQGLQGQPGRSGRDGAPGSPGAQGPSGDSGGGVVGDRGYPGNPGGKGQAGLPGEPG
FGYAGTAGPPGTAGDPGTSGSPGAPGAPGTPGGWRCGAEGVFETSYTEGGDTRPCQDPGP
GDPGPPGNPGPPGDPGFPGGVGRPGINGAKGERGNFGHGGLPGPPGFLGAKGEPGNPGLS
SGGGQPGGRGKDGLPGLNGQKGERGEVYGAVDGKPGLPGLNGGPGDKGQPGTPGHPGTPG
TEGRPGYPGAKGERGVDGHPGLPGEIGLPAERTGPGLPGAVGFSGPKGAPGTPGYSGAKG
ERGNPGFQGPGGGKGRRGEPGIPGNPGSVGPAGPPGVSREGNPGRHGSKGERGFPGPIGF
PGLGGSPGYPGGQGAKGPRGNSGRDGLPGGPGAPGAKGDVGSPGYPGLPSAPGPVSRVIK
GDPGDPGFNGSPGYPGPRGDKGFSSSVGRRGLPGVPGSAGRKGERGNPGFPGPSASSGYP
GPKGGPGGSGYPGSPGPKGDNGGPGFPGNPGAAGTPGQKGARGDSFGYPGGIGIKGAAGD
PGFSGKPGGAGLPGDAGRPGGPGYSGKKGEPGISGRPGPPGPPGYPGSKGLPGFAGRTGQ
PGGLGSPGAPGSHGNRGAPGFPGLNGLNGLGGPKGLPGTPGSSWSGGPGSPGYSGQKGER
GGSIPGGPGFPGGKGERGDSGRAGSPGLPGPPGPRGYSFGGETPGPTGDSGAPGYDGGPG
PMGRVGPQGPPGPGSTPGEPGDQGAPGYHGKAGEPGDPGLPGSSGQPGGAGFKGERGDTG
YTGSPGPAGAPGDPGYWGGKGPKGLRGAPGLTGRPGLGHPPEEMPPNYGEMGPPGYPGGA
GEMGSPGPSGRPGGPGAKGERGPAGKLGSHGGPGGPGPLGDPGAPGFPGRPGDQGPPGSQ
GPPGRGHRVGDTLVKHSQSTQVPSCPQGMVQMWDGYSLLYVEGQEKAHNQDLGLAGSCLP
RFSTMPFLYCNADEVCFFSSRNDKSYWLSTTAPIPMMPVADQQIAQYISRCSVCEAPSPA
VAVHSQDLTIPPCPYGWRSLWIGYSFLMHTVAGAEGGGQSLVSPGSCLEDFRATPFIECN
GARGTCHYFATKHSFWLTTVDVGREFLGVPHSETLKAGQLLSRVSRCQVCMKNI
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggaattttcgtgctcgttgttgtcttggcagttgaaactacgcacgggcag
cagggaccatgtgtggggagtaactgtgtggatgagggctgcgtctgtaacccggagaag
ggcagcaggggacggccaggggcagtggggccgatcgggccaggcgggcaggaaggcttt
ccaggaggccagggccctgctgggcccaaaggagagaggggtaaccctggactgagaggg
ctactcgggcaaaaaggagacaagggccctatgggagtgcctgggttctcagggattgat
ggagttccgggcacaccagggctcgagggaggccggggtccacctgggccaagcggctgc
gaaggatacaacggcttatctggcgacaggtctccaaacggacagccgggcactgcgggt
ctgaggggtgtccccggaggcaaaggtcagaagggcgagcctgtgtatgccggactgggc
tacgcccccaggggaaatcctggtcttcctggattggatggtctgtttggtcccagaggg
ccctctggaatcccaggtccagctggtctcaggggacccgatggaaggcctggcgcttct
ggtcctcctggtcctcccggtccaacgggggcttctggtgttggtttcaaaggagaacaa
ggagacaggggggatgtgggccagcccggacccgcggctgaagaaacccgtttgacccta
cgtgatattgagcacttcaaaggacaaaggggtgaccctggttacaagggaccaccaggt
ttgcctggaaggccaggtggctcgggggcctacggctatggggctgaaaagggagagact
ggaatcccagggcttccgggcgggcggggcgcccccggttacgatggaaccccgggacat
cccggtcaaaagggcttgcctggtgatcctggatatggtggtggaggatcaggatatcct
ggggcaaagggagttcaaggagacccaggccccccaggccccaccacctttactggggga
ggaggtgccccaggtccccgtggcgagccaggcagatctggtctttgtggccctcctggt
gatgaggggccagcggggtacccagggccaccaggcctccccggactcccggcacatggc
acaggtccagctcttccaggcttcccagggacccccgggcccaaaggggagaagggggat
ccagggcgcgcagcctatggctcaccaggtcgtccaggcagtaacggctctccggggctg
ccaggacctcctggtccccctggggactcaaagtgtattgtgccgactgaactgtgtgtt
cggggcctgccaggtcccagagggccaggaggggtcccaggatacaaaggggcaaaaggt
gaactgggagactgtcgctgtcggggagtgacagggaacggggtgcctggcaaccggggc
ccaccaggggctgcagggtcacctggttacttcggtagcaagggtgagagaggagaccac
gggtaccagggaccagctggcccccccggtacaagtggtgttccgggctctggaggctac
tcgggaaggaagggggagccaggagaatctttccactctccaaacgtgaaaggtgaacgc
ggcaaccaagggccacagggcctccaagggcagccaggacgatctgggagagatggagcc
ccggggagcccaggagcccagggaccctctggtgacagtggtggtggggtggtaggggat
cgagggtatcctgggaaccctggtggaaaagggcaggcggggttgccaggtgagcctggc
tttgggtatgcaggcactgcaggccctcctggaacagctggagatcccggtacctctggc
tcccctggagcacctggagcacctggcacaccaggtggctggcgctgtggggcggagggg
gtttttgagacctcttacactgagggaggtgacactcggccctgccaggacccagggcca
ggtgatccaggacctcccggcaacccaggacctccaggcgatcctggtttccctggaggt
gtggggaggcccgggattaacggggcgaagggcgaaagaggaaactttggccatggagga
ctacctggaccaccaggcttcttgggcgccaaaggggaaccagggaatccagggttgtcg
agcgggggtggccagccagggggccggggcaaagacggcctgccagggctgaacgggcag
aagggcgaacggggcgaggtctatggagctgtggatgggaaaccaggccttccgggtctg
aacggaggaccaggagacaagggacagcccggaacaccaggccacccaggcacacctggc
acggaaggacgtccagggtacccgggggcaaagggtgagcggggtgtggatgggcaccca
ggactcccaggtgagattggactacctgctgaaagaactggaccgggattacccggggca
gttggattctccggacccaagggcgctcctgggactccaggatactctggagcgaagggg
gagcggggcaaccctggattccaagggcccggtggtgggaaaggcagacggggagaacct
gggatacccgggaatcccggatctgtgggccctgctggccccccgggggtatcaagagag
ggcaacccaggcagacatgggtcgaagggcgaacggggctttcctggaccaattggattc
ccgggactgggaggatctccaggatatcccggtggtcaaggggcaaagggtcctcggggg
aactccggaagagatggtctgccaggtggccctggagcaccgggagctaaaggggatgtt
gggagtccgggttacccaggtttgccctctgcacctggcccggtcagcagggtgataaag
ggagatcccggtgaccccgggtttaacggatcccctggatatcctgggccgagaggtgat
aaggggttttctagctccgttggtcgtcgggggttgccaggtgtgcctggatcggcagga
aggaaaggagaacgtggaaaccctggcttccctggtcccagtgcatcttccggctatccc
ggacccaaggggggccctggtggctctggctatcccggctctccaggaccaaagggtgac
aacggaggtcctgggtttccagggaaccctggggcggcagggacgcctggccagaaaggt
gcacgtggtgattccttcggttatcctggaggtataggcattaaaggagctgctggtgac
cctggtttctcaggcaaaccgggcggcgcggggttgcctggagacgctggcagacccggg
ggcccgggatacagtgggaagaagggcgagccgggtatttcggggagaccaggccccccg
ggccccccagggtacccaggcagcaagggtctcccaggcttcgctggacggacgggacag
cctggtggactcgggtcccctggagctcccggttcccatggtaacagaggtgcacctggt
ttccctggtctcaatgggctgaatggacttggagggccaaaggggctcccaggaacccca
ggttcatcttggtcaggcggacctggctcccccggttacagcgggcagaagggagagagg
ggaggctccattccagggggtcctggtttccctggtggcaagggcgagagaggagactcg
ggtagagcaggttctcctgggttgcctggtccgcctggtcctagggggtactccttcggt
ggagagaccccaggccccacaggagattctggtgcaccagggtacgatggagggccagga
cctatgggccgcgtgggcccacaaggacccccaggaccaggcagtactccaggggagcca
ggagatcagggggcccctgggtaccatgggaaggcaggtgaaccaggtgaccctgggctg
ccaggatcctcaggacagccaggtggtgcagggttcaaaggtgagagaggagacactgga
tacaccggctctccaggaccagctggggctcctggggaccctggttactggggaggcaag
ggaccgaagggcttgagaggggcccccggtctgacgggacgaccaggcctgggacatcct
ccggaagaaatgcccccgaattacggagagatgggtcctcctgggtaccctggtggcgct
ggggaaatgggctccccaggaccgtccggaaggcccggtggaccaggtgcaaaaggcgaa
aggggacctgcaggtaaacttggatcccatggggggccggggggcccaggacctctcgga
gatcccggagcacctggcttccctggaagaccaggagatcaaggtccacccggttcacaa
ggcccccctggtaggggtcacagggtcggcgacaccctggtgaagcacagccagtccacc
caggtgccctcctgcccccagggcatggtacagatgtgggatgggtacagcctgctgtat
gtggaggggcaggagaaggcccacaatcaggacctaggacttgcgggatcctgcctgccc
cggttcagcaccatgcccttcctctactgcaacgccgacgaggtctgcttcttctccagc
cgcaacgacaagtcatactggctgtccacgacggctcccattcccatgatgccggtggcg
gaccagcagatcgcgcagtacatcagccgctgctcggtctgcgaggcaccgtccccggct
gtggccgtgcacagccaggacctcaccatcccaccctgcccctacggctggaggagcctg
tggattggctactccttcctcatgcacacggtggccggagcggagggcggcggccaatcc
ctggtctcccccgggtcctgcctggaggacttccgcgccacgcccttcatcgagtgcaac
ggcgcccgtggtacctgccactacttcgccaccaagcacagcttctggctcacgaccgtg
gacgtgggccgggagttcctgggggtcccccactcggagacactgaaagccggccagctg
ctatccagggtcagccgctgccaagtgtgcatgaagaacatctag
DBGET
integrated database retrieval system
