Conger conger (European conger): 133132219
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Entry
133132219 CDS
T10633
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04382
Cornified envelope formation
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133132219
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133132219
09142 Cell motility
04820 Cytoskeleton in muscle cells
133132219
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133132219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133132219
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133132219
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
133132219
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133132219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
133132219
NCBI-ProteinID:
XP_061103501
LinkDB
All DBs
Position
7:complement(27995887..28039047)
Genome browser
AA seq
1656 aa
AA seq
DB search
MKNTSIKSMQTLVLALLFTTLSFGVRDSEAAACAGCVGCDCSGTKGVRGERGPGGLPGQP
GVPGFPGPEGGVGPRGEKGNDGIPGPSGPKGIRGPTGLPGFPGTPGVPGLPGHDGPAGPR
GLPGCNGTKGDAGSSGYPGPQGLQGPPGFPGPKGDPGEVLGTPISSTGKGEPGIPGQPGI
PGPTGPPGLNGPIGPPGPSGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGLPGPPGRQLEE
QIRPWEYDVQRGDKGDRGLPGQPGDPGIPGNPGGSGGYRGEKGEPGEAGKRGKPGKDGDP
GLPGNLGQKGEPGGSLHGISRDGEKGEKGDRGFQGPPGVVIGGGGHGGTGQKGEPGYSGL
TGAKGDRGPQGVPGPPGQPGLPGAGGGGGSGQPGYPGERGHKGEPGQPGISIPGPPGRDG
QPGGPGPAGAPGSSGPLGNCLSGPPGLPGLQGEQGYPGTNGQKGEKGDTCFNCFANNISI
PGAPGPPGPPGFSGSPGGPGAKGDRGYPGGTGPIGPQGLPGASGTPGHPGQKGEPGRAHE
GVRGEKGDTGFPGPPGLPGLDGRPGLVGAPGTPGPKGPPGSLTVRGERGPPGSPGSPGLP
GDAGGPGAPGYGPRGPAGEKGVPGLPGGPGLTGPPGVKGESARTLPGQRGSPGAPGLKGS
PGNPGLPGTPGFSGSPGAKGDPGHPGIGLPGAPGEKGFPGVPGLPGTPGGPGRPGLDGLP
GSPGAPGAKGDPGYGSPGAPGTPGFPGGKGVPGQKGESGFPGGPGGPGRNGFDGGPGPKG
DSGVPGIPGGRGPPGVSGFGTPGPTGPTGPAGPVGAPGYPGGPGAKGDPGHPGLDIPGLP
GDRGSPGIPGSPGPMGPPGPLGGLSRDGVPGIPGPKGDSGPIGPPGPKGDPGLSGGSGFP
GPKGDDGFPGRPGGPGGPGLKGERGGPGQPGAPGPTIPPVEVKGPKGDPGHPGGSGQPGQ
KGAIGPPGDGGHPGTDGTPGIPGPQGHKGDPGNPGLPGSPGGPGPKGNPGDPGYPGGSGG
KGEPGLPGSSGLPGQPGGPGFPGAKGDAGPPGFGSPGPAGAKGEAGQPGYPGGSGPKGEA
GGPGLPGLPGGPGVKGDPGFPGLQGGPGTPGAKGLDGGPGGPGLDGGPGRPGEPGRPGGP
GGPGEKGEPGRDGIPGPAGLKGDAGIPGGGSPGPPGPPGHPGPKGDLGPGGLPGSPGYPG
TKGDAGHPGQPGAPGGVGAEGPPGVTHVGPKGNPGGPGLPGKPGGPGPVGPHGPPGPGGY
RGDKGAIGPPGTPGYSGAKGDRGAPGFSGTPGIPGPSGLKGDSGLPGVPGFPGTKGQPGT
PGALGTSGEPGDPGPQGLPGDPGPAPFVIKGERGPVGPAGLTGARGLPGPPGLNGLSGSP
GGPGDSGPDGPPGFNGPSGRKGDTGPSGLPGSSGLPGPAGVQGPPGQPGASGFLVTRHSQ
SSEVPFCPDGTSLIYDGYSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNF
ASRNDYSYWLSTPQPMPMNMAPITGDTIKPFISRCAVCEAPAMVIAVHSQTVQLPSCPRS
WEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYGNSYSFWL
ATVDINDMFRKPPSETLKEGNLRTRVSRCVVCMKRT
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataccagcattaagagtatgcagacacttgtcctggctctgcttttcacgacc
ctctcctttggggtgcgggactccgaagcagcggcttgtgcgggctgtgtaggctgtgac
tgcagtggtacaaaaggagtacggggtgagagagggcctggtggcctacccggccagcca
ggggtaccagggttccctggcccagagggaggcgttgggcccagaggagagaagggtaac
gacggaattccaggaccatccggcccaaaaggaatcagagggcccacaggactgcctggt
ttcccaggaaccccaggagtgccgggtctgccgggacacgatgggccggccggaccgagg
ggtctcccagggtgcaacgggacaaagggggacgctgggtcttctggctatccaggccca
caaggcctccagggtcctcctggttttccaggccccaagggagatcctggtgaggtcttg
gggacgccaatttcttctacagggaaaggagagcctggaattccaggtcaaccgggaatt
cctggaccaacaggacctcccggactaaatggtccaattggccctcctggcccgtcaggt
tatgagggacgtccagggccaccaggtcctccagggcccaagggtaacatgggcctgaac
ttccagggtccaaaaggagagaagggtttgccaggtcctccaggtcgtcaacttgaagaa
cagataaggccatgggagtatgatgtacaaagaggtgataagggagatcgggggttgcct
ggccagcctggggaccctggcatccctggaaatccgggtgggtccggcggctaccgaggc
gagaaaggggaaccgggagaagcagggaaacggggtaagccaggcaaggatggagaccca
ggattaccggggaacctgggccaaaagggagaacctggcggctcattgcatggcatttca
agagatggagagaagggtgaaaaaggggatcgtgggttccaaggcccccccggggtggtg
attggaggtgggggacatggcggcacgggtcaaaaaggtgaaccgggctattctggatta
acgggggccaaaggagaccgaggaccccaaggtgtaccaggacctcctggccagcccgga
ttaccaggtgcggggggtggtggtggctctgggcagccaggttatccaggggaacgggga
cataagggagagccaggccagcccgggatctccatacctgggcccccaggccgggatgga
cagcctggtggccccggacccgccggagccccaggatcctcaggccctctcgggaactgc
ctttcagggcccccagggttacctggcctgcagggagagcagggatatcctggaaccaat
ggacagaaaggtgaaaagggagacacttgtttcaactgcttcgccaataacatctccatt
cctggagcccctggacccccggggccccctggattctcaggtagtcctggtgggccaggg
gccaaaggtgaccgagggtaccctggaggtacagggcctattgggcctcagggtttgcct
ggggcttctggtacgcctggacatccgggacagaaaggagagcctggcagggcacatgag
ggggttcggggtgagaagggtgacactggattccccggcccccctggcttacctgggctg
gacggaagacctggcctggttggagctcctggaacacctggacccaaaggtccacctgga
tccctgacggtgagaggtgaacgcgggcccccaggatcacctggaagcccaggtcttcca
ggagatgcaggaggacctggtgctcctggatatggccccagggggcccgcaggagaaaag
ggtgtcccgggtctgccaggggggccaggactaacaggtccaccaggtgtgaaaggtgaa
tctgccagaacattgccaggtcaacgtggatcccccggagctccaggccttaaaggatct
cctggtaaccccggactgccagggactcctggattcagtgggtcgcctggagcaaaggga
gatcctggacaccccggcattggactaccaggcgctcccggagagaaaggattccccgga
gttccaggactgcccggaacaccgggtggcccaggccgcccaggtttagatggcctccct
ggatcacccggagcaccaggtgcaaagggtgaccctggatatggttcgccaggtgctcca
ggcacaccaggattccccggtggtaaaggagtccccgggcaaaagggagagtcaggattc
cctgggggccctggaggccctggccggaacgggtttgatggaggcccaggacccaaaggt
gattcaggtgttcctggtatccctggaggccgtggacccccaggtgtttctggttttggt
accccaggtcccactggacctactggacctgcaggacctgtgggtgctccagggtaccct
ggaggacctggagcaaagggtgaccccggacacccaggactggatatcccagggttgcca
ggagacagagggagtcctggtatcccaggttccccaggacctatgggcccaccaggacct
ttaggaggtttatcccgggatggggtgcctggaatacctggccccaaaggagactctggg
ccaattggaccaccaggccctaagggagaccctggactgagtggaggctctggattccct
gggccaaaaggtgacgacggctttcctggccggcctggaggacctggtggtcctgggctg
aagggagagagaggtggtcctggtcagcctggggcccctggaccaaccataccccctgtg
gaggtgaagggaccaaagggagatccaggtcatccaggtgggtcagggcaaccaggacag
aaaggcgcgattggtcccccaggtgatggcggacatccagggaccgatggtacaccgggt
ataccaggacctcaaggccacaaaggagatcctggaaatccaggtctgccaggttcccct
ggaggtcctggaccgaaaggcaaccccggtgacccaggatacccaggtggtagtggtggg
aagggtgagccaggattgcccggttcctcgggcctgcccggacagcccggtggccccggg
ttccctggtgctaagggtgacgctggccctcctggttttggatctccaggccctgccggt
gccaagggtgaggcaggtcagcctggataccctggcggttcaggacctaagggagaggct
ggtggcccaggtctgcccggactgcctggtggacctggagtcaagggtgaccctggtttt
cccggactccaagggggacctggaacaccgggtgcgaagggacttgatggaggtccaggt
ggcccaggtctggatggaggccctggtcggccaggagagccaggtcgccccggaggacct
ggaggaccaggagagaagggcgaacctggtcgagatggcatcccagggcctgcagggctc
aagggagatgcaggtatacctggcggtggctcccctggaccccctggcccgccaggacac
ccaggtccgaagggagatcttgggcctggtgggcttcctggatcacccggctatcctggg
acaaagggagacgcaggacacccaggccagcctggggcaccaggtggcgttggcgctgaa
gggccccctggtgtgacccacgtaggacctaaaggcaacccaggaggcccaggcctccca
ggaaaacctggtggccctggccctgttggaccccatgggcccccaggtcctggagggtac
agaggggataagggggcaattggaccacccggtactcctggctactcaggagctaaagga
gacagaggagcacctgggttttcgggcacacctggcattcctggaccttctggcctgaag
ggcgattcgggtctccctggcgtcccgggattcccaggtacaaagggacaacctggtacc
ccgggagcacttggcacaagcggagagcctggagatcctggtcctcaagggctacccggt
gaccctggcccagccccctttgtcatcaaaggggaacgtggtcctgtcgggccagctgga
ctcacaggcgcaagaggccttcccggacccccaggattaaacgggctatcggggtcccca
ggaggccctggtgactcaggtccagatggccctccaggattcaatggcccctctggacgc
aaaggagatacagggccttctggactgccagggtcctctgggctcccagggcctgcaggt
gtccagggcccccctggccagcccggggctagcggcttcctggttacccgccacagtcag
tcttcggaagttcctttctgccccgatggcaccagtctgatatacgacggctactcgctg
ctgtacgtgcagggtaacgagagagcccatgggcaggatttgggcacggctggcagctgt
ctgcgcaggttcagcaccatgcccttcatgttttgcaacatcaacaacgtctgcaacttc
gcctcgcgcaatgactactcctactggctgtccacaccccagcccatgccaatgaacatg
gctcccatcaccggcgacaccatcaaaccattcatcagcaggtgtgcggtgtgtgaggcc
ccagccatggtgatcgctgtgcacagccaaaccgtccagcttccttcctgcccacggagc
tgggagccgctgtggatcggctactcattcatgatgcacacgagcgcaggggcagagggg
tcaggtcaggccctggcatcccccggatcctgtctggaggagttccgctccgcccccttc
attgagtgtcacgggcgtggcacctgcaattactacggcaactcctacagcttctggctt
gccactgtggacattaatgacatgttcaggaagcccccctcggagaccctaaaggaaggc
aacctgcgtacacgcgtcagccgctgcgtggtgtgtatgaagaggacgtaa
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