Conger conger (European conger): 133132239
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Entry
133132239 CDS
T10633
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133132239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133132239
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133132239
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TFIIF_alpha
TSX
Motif
Other DBs
NCBI-GeneID:
133132239
NCBI-ProteinID:
XP_061103541
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Position
7:complement(28689908..28699053)
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AA seq
533 aa
AA seq
DB search
MATELGTSDPTSVPNIVTEPEEDEEHWLYGDENSEKQNEENLPGFEESTQESYGTEEKDT
SAQVAKSAEDEDDEDSDSDDDDVKVTIGNIKTGAPSYMAPPMNLSLKPGRGYLAPAAKLP
PKGVDLEALGMNGLEAEPEVEADIFEDKPWRKPGADLSDYFNYGFNEETWKSYCEKQRRL
QLGLEPNVPLASENKITVQQGRVAVLEKEMEASAVKQDFKMDFPPPPITLSAASRLKAGP
PPNRKLGGTIDVIGGQTGAIRRVEGRRREMHEQNPIQVLGEHPTKTQPFVPPAGPPPPPI
GAPPPHFMHPPPPVARMPPPLHPPGMPPPAIPGLFPPPMAPPPSLLMPPLDSRCPPSGYS
NRAPPAFGYNTADPSYISYPPVSSSHPPWGASLEKGGAAGSGSHWEYGGSRRDRERDREI
ERERDRERDRTPTTSEYSNEDDRYHYYSHEREFHHAREHSRERSCERIREKEERHRDRRH
RDKEESKHKSSKRRQHEGEEGESHRRHKHKKSKRNKEEKEEGVGHGEEPEGKD
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaactgggtacttcagatccgacctcggtaccaaacatcgttaccgaaccc
gaggaagatgaggaacactggctttatggggacgagaactccgagaaacaaaacgaggag
aatttgcctggattcgaagagtccacacaggagagctatggcacagaggaaaaagacacc
tctgctcaggtagcgaaaagtgctgaggatgaagacgacgaggacagcgacagtgacgat
gatgacgttaaggtcacaatagggaacattaaaactggagctccctcatacatggcacca
ccgatgaacctgagtctgaaaccagggaggggctacttggctccagcagctaaactgcca
cccaaaggcgtagatttggaggcattgggcatgaacgggctggaggcagaaccagaggtg
gaagcagacatttttgaagacaaaccgtggcggaaacctggtgctgatctttctgattac
ttcaactacggctttaacgaggaaacgtggaaatcgtactgcgagaagcagcgccggctc
caactggggcttgagcccaatgttccgctcgcctcagagaacaagatcacagttcagcaa
ggaagagtggctgttttggagaaggaaatggaggcatctgctgtcaagcaggacttcaag
atggacttccctccccctcccatcacgctttctgccgccagtagactgaaagctgggccg
cccccaaacaggaagttgggtgggacaatcgatgtgattggtggacagaccggtgctatt
cgccgggtggaaggacgcaggagagaaatgcatgaacagaatccaatccaggtgctggga
gagcacccaactaaaacccaaccatttgtcccaccagcagggcccccacccccgcccatt
ggtgctcctcccccacacttcatgcacccacccccacctgtcgcacgaatgcccccccct
ctgcaccccccaggtatgcctccacctgccattccagggctgttcccaccgccgatggct
ccgcccccgagtctgttaatgcccccattggatagcaggtgtcccccatctggctacagc
aacagagctccccctgcttttgggtacaacactgcagacccaagttacattagctacccc
cctgtctcatcgtcacacccaccatggggggcctcgctggagaaggggggagcagcaggg
agtgggagccactgggagtatgggggctctcgccgggacagggagcgggacagagagatc
gagagagagagagaccgcgagagggatcgtactcccaccaccagcgagtacagcaatgag
gatgatcgatatcactactacagtcacgagcgggagtttcaccatgcacgtgagcatagt
cgcgagcgtagttgtgagcgtatcagggaaaaggaagagcgtcacagagatcgacggcac
agggacaaggaggaaagcaaacacaagtcctccaagcgcaggcagcacgagggtgaggag
ggggagagtcatcgcagacacaaacacaagaagagcaaacgcaacaaagaggagaaggag
gaaggggtggggcatggggaggagccagagggcaaggactag
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