Conger conger (European conger): 133132328
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Entry
133132328 CDS
T10633
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133132328 (scaf8)
03041 Spliceosome [BR:
ccog03041
]
133132328 (scaf8)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133132328 (scaf8)
Spliceosome [BR:
ccog03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133132328 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
133132328
NCBI-ProteinID:
XP_061103664
LinkDB
All DBs
Position
1:28818110..28857854
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AA seq
1330 aa
AA seq
DB search
MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVVDSIVRQSRHQFGQEKDVFAPRFSKNIIGTFQNLYRCPSDDKSKIVRVLNLWQKN
NVFKSDIIQPLLDMAAGLPPPSLTPVTTSSTAPMNSTTPGTPTTPATPANMVQSLPDWAS
QISNTDTVAAVAQILQSPQGQQLQQLVQSLQLQQQKPQPSLLQALDAGLVVQLQALTAQL
TAAATANTLNPLEQRVSSFNKLLLSQKLLGQFDFGGDSERTESSKKDAPPSQLPMVSDSL
NSSIFHQLAEQLQQQNLEQFQKQFLEHQQQQQQQQQQQQQQQQQQQQQQQQQKAMSAEGQ
EAMFGSDSSATPSQSRAQQHQEVEDKMDDSIDNQQQDMDLDEGQDTVDEDMFEVEEKKTG
STRSRTRSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRALERE
KERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAY
ISMVHRQDAYRARRKLSSGSYKIGSKVIKIAWALNIGVKQEYKQCWDVDLGVTYIPWEKV
KLDDLDGFVDGGMIDQETVNSEWEAARNAEPPKEAPSQPAAAEPSSLSSTQTEAFTQPVT
MMPVQIPVAQGVPAVGLIPPSHPTFTMAMPPPGFGPPPPFLRAGFNASQPPPGFMPPSVV
PQTSVGSAVPSVPTSLMQSSMSGTQETPKSSPFGAMIPPVSTIPGSFIPQAVFNPVGAQP
QLPAENKAAQSADGLDTPGEITLQGMQNAVRSGMGLLGMHPSASLTHPLHHPNLGGQRMP
GLLPLEARPSLLQGAGSRFPLLMANRLVHPANSLTPSPALNPAQPAPPRAPGPASFPEPD
QFGRAQGVFGQPPVQPPDGPAQPKDRSPAGGNGIQQEKDQDYRFPPPEKQGLLPTPPPEN
RQIREGPQGDGGEGQGRKEPLSGFKHESRWGPPRGDFDERDLRGVPTGGPKGFQDERQGP
RANFPNRFENRGGGGGGGGGSGGGGGGGGGGGGGGGPAWSRGGRAGEADMHQDFDDRRRT
WDRQRDRDDRDFDFRREMNGSRHGRERERDRERDRDRGRERNRERERERDWDRDRDRERD
QGRDRNRQAWAPPVPAPAPAPAPAPAPAPAPAPAPAPVQAPAQAPAPVPVPVPVPVPAPT
PVPAQAPAPAPAPAPVPVPVPTQTPTPAPAPAPVPTPTLKPQAPSVPEKSANDQEQENPQ
CVNGAGSNSTPSAPEPPEVTSGPEEPRNNLEKHASPKDVSNEQSVPKEDAETQPVVEKTE
TEGTLSSLSR
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgttaaagcatttaatggcgagctttactccttgaacgaatacaagcctcca
atatccaaagcaaagatgacccagataacaaagtctgccataaaagccataaagttctac
aagcatgttgtgcagagcgtggagaagttcattcagaaatgcaaaccagagtacaaggtc
ccggggctgtacgtcgtcgactcaatcgtgcgacagtcgcggcaccagttcggccaggag
aaggacgtgttcgccccgcgcttcagcaagaacatcatcggcaccttccagaacctttac
cgctgcccttccgacgacaagagcaaaatcgtgagggtcctcaatctgtggcagaagaat
aacgtcttcaagagcgacatcatccagcccctccttgacatggcagcaggtctaccgccc
cccagcctgacccccgtcaccaccagcagcacggcgcccatgaacagcaccacccccgga
accccaacgacccccgccaccccagccaacatggtgcaaagcctgccagactgggcctcc
cagatctccaacacggacaccgtggcagccgtggcccagatcctgcagagccctcagggc
cagcagctgcagcagctggtgcagagcctgcagctccagcagcagaagccccagccctcg
ctgttgcaggcgctggatgctggcctcgtagtccagctgcaggccctcactgcccagctc
actgccgccgccaccgccaacacactcaaccccctggagcagagggtgtcctccttcaac
aagctcctcctttcccagaagctgttgggacagtttgattttgggggtgattctgaacgc
accgagagttccaaaaaggacgcgccgccatcccaactgcccatggtctccgactccctc
aacagttccattttccaccagctggcagagcagctgcagcagcagaacctggagcagttc
cagaagcagttcctggaacaccagcagcagcagcaacaacaacaacaacagcagcagcag
cagcagcagcaacaacagcaacagcagcagcaacagaaggcaatgtctgcggagggtcag
gaggcaatgtttggttctgacagctcagccacgccgtctcagagccgcgcccagcagcac
caggaggtcgaggacaagatggatgactccatcgacaaccaacagcaggacatggatttg
gatgaaggccaggacacggtggacgaggacatgtttgaggtcgaggagaagaagaccgga
agcaccaggtccagaacgcggtccagatcccgctccaggtctcccaggaaacggcggtca
cggtcacggtcaggttcacggaagcgcaagcaccggaagcgctcgcgctcgcgatcgcgg
gagcggaaaaggaagtcgtcgcgttcgtactccagtgagcggcgggctctcgagcgcgag
aaagagcggcagaagaaagggctgccccccatccgttccaaaactctgagtgtttgcagc
acaactctgtgggtgggacaggtcgacaagaaagccacacagcaagacctcaccaacctg
tttgaagaatttggacagatcgaatccatcaatatgatccccccgaggggctgtgcatac
atcagcatggtgcacagacaagacgcctaccgcgcccggcggaaactcagcagcggctcc
tacaagatcggctccaaagtcatcaagattgcctgggccctgaacattggggtgaagcag
gagtacaagcagtgttgggatgtggacttgggtgtgacttacatcccctgggagaaggtc
aagctagatgacctggatggttttgttgacgggggcatgattgaccaggagacggtcaac
agcgagtgggaagccgcgcgtaacgcagagccacccaaagaggcgcccagccagccggcc
gctgctgagcccagcagcctgagcagcacccagactgaggccttcacccaacccgtcacc
atgatgcctgtgcagatcccagtggcacaaggcgtcccggccgtggggctcatcccaccg
tctcacccaacgttcaccatggcgatgcctccacctggtttcgggcctccgccgcctttc
ctgcgagctggtttcaatgcctcccagccccctcccggtttcatgccaccttctgtagtt
cctcagacatccgtgggatctgctgtcccctcagtaccaacatccctgatgcaatcctcc
atgtccgggacgcaggagacccctaaaagctcgcccttcggagcaatgatccctcccgtc
agcaccattccggggagcttcatcccccaggcagtcttcaatcccgtcggggcccagccc
cagctgcctgcagagaataaggcggcccagtccgcggacggcttggacacccctggggag
ataacgttgcaagggatgcagaacgccgtgcggagcgggatgggcttgctggggatgcac
ccatccgcgtctctgacccacccgctgcaccaccccaacctcggcggccagaggatgcca
ggcctgcttcccctggaggcccgtcccagcctgctgcagggtgccggcagccgcttcccc
ctcctcatggccaacagactggtgcaccctgccaacagcctgacccccagccccgccctg
aacccagcccagccagctcccccccgggcccccggccctgcctccttccctgaacctgac
cagttcggcagagctcagggggtgttcgggcagccccctgtccagccccccgatggcccc
gcccagcccaaggaccggtcccctgcgggaggcaatggcatccagcaggagaaggaccag
gattaccgcttcccgccacccgaaaagcaggggctgctgccgaccccgccaccagagaac
agacagatcagggaagggccccagggggacggcggggagggtcagggcaggaaggaacca
ctcagcggcttcaaacacgagagccgctggggcccacctaggggggattttgacgagcgg
gacctgaggggtgtgcctactgggggccccaaaggctttcaggacgagcggcagggtccc
agagcgaacttcccaaatcgttttgagaatcgaggaggagggggagggggagggggtgga
tctggaggtggaggtgggggagggggcggaggaggaggagggggtggtcctgcctggagc
cgcggtggtcgggcaggagaggcggacatgcaccaggactttgatgaccggcggcggacc
tgggaccgtcagagggaccgcgacgaccgggacttcgactttcggcgggagatgaatggc
agccgccacggccgggagagggagagggacagggagcgtgaccgtgaccgcgggcgcgag
agaaatcgcgaacgtgagcgggaacgtgattgggaccgtgacagagaccgcgaaagggat
cagggacgtgaccgcaaccgccaggcctgggcgcctcctgtcccagctccggctccggct
ccggctccggctccggctccagctccagctccagctcctgcccctgcccctgtccaagct
ccagcccaagctccagccccggtaccagtaccggtaccggttccagtccctgcccccacc
ccagtccctgcacaagccccagctccagctccagccccagccccagtcccagtcccagtc
ccaacccaaaccccaaccccagctccagctccagctccagttcccactcctaccctcaaa
ccgcaagcaccctctgttcctgaaaagtctgccaacgaccaggagcaggagaatccgcag
tgtgtgaacggggcagggtcgaatagcaccccatcggcccctgaaccacccgaggtgacg
tctggccccgaggagcctcggaacaatctggaaaagcatgcctcccctaaggatgtaagc
aatgaacaaagtgtaccgaaggaggatgcagaaacgcagcctgtggtagagaaaacagaa
actgaggggacattatcatcactcagtaggtaa
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