Conger conger (European conger): 133132380
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Entry
133132380 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133132380
03015 mRNA surveillance pathway
133132380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133132380
03041 Spliceosome [BR:
ccog03041
]
133132380
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133132380
Spliceosome [BR:
ccog03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
133132380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
133132380
NCBI-ProteinID:
XP_061103789
LinkDB
All DBs
Position
1
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AA seq
1005 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKNPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQDNIAGIP
TAFLEQKKEEIKQRQIEQEKLASLKKMDEEKREKENKENREKDQPKSPRRKKSRSPSPRR
RSPSPRRRSPGKRDRKRSHSRSPRRKPSPAPASSPTPAPPKTLQEPLPEPDQSQSGQPQP
LIQEASSTSDIVKEGGPDSVQEVKEAFPEAPVQKEEKARPRXREKDGRRDRPRHRSRSRS
KSRSRSRSRRRPRSRSRSYSPRRRQSPRRRGSPRRRSPPRRPPPAPRHRRSRSPARRRRS
RSPSSSGSSSSSSSRSPQKKNTKRVSNTPPRKAHRPDPPGSPPRRRGRTPRPPDLPPPSG
LKRKPGAKNESPSPAPKPRRSDPSESDDDITGGKGAADSVQQRRQYRRQNQQSSSETGSS
SSSEDEGPKRPAGGAGSGPGAAARNGEVKRRHSHSPSSPRRRHRDSSPRNAAGKRWQSPV
QNRRRRTPSPPGRRHRSPSPPRRRRSPSPPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSP
SPLPPQKRRVSGSPPPPKRRASPSPAPKRRAGPPPPPPRRPTAPRPAPPPTRRRTPSPPG
RRHRSPSPPRRRRSPSPPPRRRRSPSPRRYSPPIQRRYSPSPLPPQKRRVSGSPPPPKRR
ASPSPAPKRRGSRSPKRRGSPPPKRRTPPPASSSSSPPPPARSRRSPALLPPPSASTNRA
GRDRLSPSPPAARGRGQRPSSSPPARHGPASTTPPPQRRQQSPSPSNRPIRRVSRTPEPK
KSKKASPSPQPMRRVSSRSPSGSPEPAGKKRPAPASASPSPSRSASGSPAPPTKKTNSAS
ASPSPNKNSDTEAGGKKKKKKKEKKHKKDKKHKKHKKHRKEKVAVVTVATDDVPPEGAGL
EADPDSDPKKDSDSEVEDSLDDLEKHLREKALRSMRKAQTSPPQS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggcacgagtgcagagcaagacaatcgcttcagcaacaag
cagaagaagctactcaagcaactgaagttcgcagaatgcctggagaagaaggtggacatg
accaaggtgaacctggaggtgatcaagccctggatcacccagcgggtcacggagatactg
gggttcgaggacgacgtcgtcatcgagttcatcttcaaccagctggaggagaagaacccg
gacagtaagatgatgcagataaacctgacgggcttcctgaacgggaagaacgcgcgggag
ttcatgaaggatctctggcccctgctgctcagcgcccaggacaacatcgccggcatcccc
accgccttcctggagcagaagaaggaggagatcaaacagagacagattgagcaagagaag
ctggcctccctgaagaagatggatgaagagaagagagaaaaggagaacaaggaaaaccga
gagaaggatcaacccaaaagtcccagaaggaagaagtccaggtcgccgtcaccacggaga
cggtcgccgtcaccacgccgacgatcgccagggaaacgggacaggaagcgcagtcattcc
cgctcgccccgacgcaagcctagccccgcccccgcctcctcgcccacgcccgccccgccc
aaaaccctgcaggagcccctgcccgagcccgaccaatcacagagcggccagccccagcca
ctcatacaggaggcctcctccaccagtgacatagtgaaggagggcgggccggactcggtg
caggaggtgaaggaggcgttcccggaggcgccggtgcagaaggaggagaaggcacggccg
cggnagcgggagaaggacgggcgcagggaccggccccggcaccgctcccgctcccgctcc
aaatcccgctcccgctcccgctcccgccggcggccccgctcacgctcccggtcctactcg
ccccggcggagacagagcccccggcgacgggggtcgccacggagacgcagcccccccaga
cgacccccccctgcccccagacaccgtcgcagccgctcccctgctaggaggaggcgctcc
cgctccccgtcgtcctccggcagctcctcttcctcgtcctcccgctcaccacagaagaag
aacaccaagagggtgtccaacaccccgccgcgcaaggcccaccgccccgacccccccggc
agccccccccgcaggcgaggacgcaccccccgccccccagatctcccccccccctcaggt
ttgaaacgaaagccgggagccaagaacgagtccccgtctcccgcgcccaaaccgcgccgg
tcggacccgtctgagtccgacgatgacatcacgggggggaaaggggcagcagactcagtg
cagcagcgaaggcagtatcgccggcagaatcagcagtcttcctcagagaccggatcttcc
tcttcctctgaagacgaagggccgaagaggccggctggcggggcgggctcagggcccggg
gctgcggcccgaaacggggaggtgaagaggaggcacagccactccccctcctcccccagg
aggcgccaccgagactcctcccccaggaacgccgctgggaagaggtggcagtcccccgtg
cagaacaggagaagacggaccccctctcccccgggacggagacaccgctccccctccccg
ccccgccgacgccgctccccctcccctcctcccagacgcaggtctcccagccccccccct
cgcagacgctccccctccccccgccgctactccccgcccatccagaggcgctacagcccg
tcccccctgcccccccagaagcgcagagtttcggggtcccccccgccccccaaacgccgc
gcgtcgccctcccccgcccccaagcgccgcgcgggtcccccgccccccccaccaagaaga
ccaacagcgcctcggccagcccctcccccaacaagaagacggaccccctctcccccggga
cggagacaccgctccccctccccgccccgccgacgccgctccccctcccctcctcccaga
cgcagacgctccccctccccccgccgctactccccgcccatccagaggcgctacagcccg
tcccccctgcccccccagaagcgcagagtttcggggtcccccccgccccccaaacgccgc
gcgtcgccctcccccgcccccaagcgccgcggctcccgctcccccaaacgccggggctcc
cccccgccaaagagacgcacgcccccgcccgcgtcctcctcctcctccccccctcccccg
gcccggtcccgcaggagccccgccctcctgccgcccccgtcggcctccaccaatcgggcc
gggcgggaccgcctctccccctccccccccgcggccagggggcgtggccagcgcccctcc
tccagcccccccgcccgccacggccccgcctccaccaccccgcccccccagcggcggcag
cagtccccgtctcctagcaacaggcccatccgccgggtctcccggacaccggagcccaag
aagtccaagaaggcgtcccccagcccccagcccatgaggagggtctcctcccgctccccg
tcaggctccccggaaccagccggaaagaagcgccccgcccccgcctccgcctccccctcc
ccttcccgctctgccagcgggtcccccgccccccccaccaagaagaccaacagcgcctcg
gccagcccctcccccaacaagaactcagacactgaagcaggaggcaagaagaagaagaag
aagaaggagaagaaacacaaaaaagacaagaaacacaagaagcataagaagcacaggaag
gagaaggtcgccgtggtgaccgttgccacggacgacgtcccgccggagggcgcagggctg
gaggcagaccccgattcagatcccaaaaaggactcagacagtgaagtagaagacagtttg
gatgacctggagaagcaccttcgggaaaaagctctgcggtccatgcgaaaggcacagacc
tcccccccccagtcctga
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