KEGG   Conger conger (European conger): 133132876
Entry
133132876         CDS       T10633                                 
Symbol
smfn
Name
(RefSeq) small fragment nuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ccog  Conger conger (European conger)
Pathway
ccog03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    133132876 (smfn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccog03019]
    133132876 (smfn)
   03009 Ribosome biogenesis [BR:ccog03009]
    133132876 (smfn)
Messenger RNA biogenesis [BR:ccog03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     133132876 (smfn)
Ribosome biogenesis [BR:ccog03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    133132876 (smfn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-GeneID: 133132876
NCBI-ProteinID: XP_061104643
LinkDB
Position
7:complement(54441348..54447068)
AA seq 291 aa
MPALMRTAAWTSRTRFAAGLTVLFPFLPRAAIFPGARTLHFQVDARRYAARSPGTARAAI
TGLSPLQTGLNHLTLGASTFRFCKRMTTSTDSMVQRLVWVDLEMTGLDIEKDQIIEMACI
ITDSNLNILAEGPNLIIKQPDELLDGMSDWCKEHHGKSGLTQAVRNSKISLQQAEYEFLA
FIRDHTPPGHCPLAGNSVHADKKFLDKYMPQFMRHLHYRIVDVSTIKELCRRWFPEEYKL
APQKKASHRALDDISESIKELQFYRANVFKVVTEEKTRKIVENGEGRMCPS
NT seq 876 nt   +upstreamnt  +downstreamnt
atgccggcgctcatgagaacagcggcgtggacgtccagaacgaggtttgccgctggtctg
acagttttgttcccgtttctacccagagcagcgatatttccaggggcccgaacacttcat
tttcaagttgatgcacgtcggtacgccgcacgtagcccgggaaccgcgagagctgcaata
acgggcttatcgccccttcaaacagggttgaatcacttaacgttaggtgcctccacattt
cgtttctgcaagaggatgacaacttcaaccgacagcatggtccagagattggtgtgggtg
gatctggagatgactggactggacatcgagaaggaccagataattgaaatggcctgcatc
ataacggattccaacctgaacattttggcagagggtccaaatctaataataaaacagcca
gatgaacttttggatggaatgtcagactggtgtaaggaacatcatggaaagtcggggctg
acgcaggctgtgcggaacagcaagatctccctgcagcaggccgagtacgagttcttggcc
ttcatccgggaccacacccctcccggccactgccccctagcaggaaactctgtacacgct
gataagaagtttctggacaagtacatgccccagttcatgcggcacctccactatcggatc
gtggacgtcagcaccatcaaggagctgtgcaggcgctggtttcctgaggaatacaaactt
gccccacagaagaaagcatcacacagagcgctggacgacatttccgagagcattaaagag
ctgcagttttacagagccaacgtcttcaaggtggtgacggaggagaagacgcggaagatc
gtggagaacggggaaggccggatgtgcccgagctga

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