Conger conger (European conger): 133132876
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Entry
133132876 CDS
T10633
Symbol
smfn
Name
(RefSeq) small fragment nuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133132876 (smfn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133132876 (smfn)
03009 Ribosome biogenesis [BR:
ccog03009
]
133132876 (smfn)
Messenger RNA biogenesis [BR:
ccog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
133132876 (smfn)
Ribosome biogenesis [BR:
ccog03009
]
Eukaryotic type
Pre-60S particles
RNases
133132876 (smfn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
133132876
NCBI-ProteinID:
XP_061104643
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Position
7:complement(54441348..54447068)
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AA seq
291 aa
AA seq
DB search
MPALMRTAAWTSRTRFAAGLTVLFPFLPRAAIFPGARTLHFQVDARRYAARSPGTARAAI
TGLSPLQTGLNHLTLGASTFRFCKRMTTSTDSMVQRLVWVDLEMTGLDIEKDQIIEMACI
ITDSNLNILAEGPNLIIKQPDELLDGMSDWCKEHHGKSGLTQAVRNSKISLQQAEYEFLA
FIRDHTPPGHCPLAGNSVHADKKFLDKYMPQFMRHLHYRIVDVSTIKELCRRWFPEEYKL
APQKKASHRALDDISESIKELQFYRANVFKVVTEEKTRKIVENGEGRMCPS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgctcatgagaacagcggcgtggacgtccagaacgaggtttgccgctggtctg
acagttttgttcccgtttctacccagagcagcgatatttccaggggcccgaacacttcat
tttcaagttgatgcacgtcggtacgccgcacgtagcccgggaaccgcgagagctgcaata
acgggcttatcgccccttcaaacagggttgaatcacttaacgttaggtgcctccacattt
cgtttctgcaagaggatgacaacttcaaccgacagcatggtccagagattggtgtgggtg
gatctggagatgactggactggacatcgagaaggaccagataattgaaatggcctgcatc
ataacggattccaacctgaacattttggcagagggtccaaatctaataataaaacagcca
gatgaacttttggatggaatgtcagactggtgtaaggaacatcatggaaagtcggggctg
acgcaggctgtgcggaacagcaagatctccctgcagcaggccgagtacgagttcttggcc
ttcatccgggaccacacccctcccggccactgccccctagcaggaaactctgtacacgct
gataagaagtttctggacaagtacatgccccagttcatgcggcacctccactatcggatc
gtggacgtcagcaccatcaaggagctgtgcaggcgctggtttcctgaggaatacaaactt
gccccacagaagaaagcatcacacagagcgctggacgacatttccgagagcattaaagag
ctgcagttttacagagccaacgtcttcaaggtggtgacggaggagaagacgcggaagatc
gtggagaacggggaaggccggatgtgcccgagctga
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