Conger conger (European conger): 133133113
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Entry
133133113 CDS
T10633
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133133113 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133133113 (ddx46)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133133113 (ddx46)
Spliceosome [BR:
ccog03041
]
Complex A
U2 snRNP components
U2 related factors
133133113 (ddx46)
Complex B
133133113 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
133133113
NCBI-ProteinID:
XP_061105102
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All DBs
Position
7:complement(3316844..3340042)
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AA seq
1049 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPEKRSKREDRAGSRNRDRDRGRRERSRSRDRRRS
RSRDRKRPRRSRSRERRRSRSRERRRSRSRHRSASPSKSRKNEDRSKSKERSDNPEQSAE
KKKIKEEKEEEKVEDQQDFDQNRLEEEMRKRKERVEKWREEQRRKAMENIGELKRELEEM
KQGKKWSLEDDDDDDEEAPAPVEPEEEEEATAAVPEEATPMEEEVGEEVDPLDAYMEEVK
EEVKKFNMGSMRGGDKKGVMKVTKVMTVVTTKKAPHTTKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKVLEPVDHKKIEYDPYRKNFYVEVPELAKMTPEEVNVYRLELEGI
TVKGKGCPKPIKTWVQCGTSMKILCALKKHSYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHILDQRPLEEAEGPIAVIMTPTRELALQITKECKKFSKPLALRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVVDEADRMFDMGFE
PQVMRIVDNIRPDRQTVMFSATFPRAMEALARRILLKPIEVQVGGRSVVCSDVEQHVIVI
EEENKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDS
IINDFKNGACRLMVATSVAARGLDVKHLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAY
TFITEDQVRYAGDIIKALELSGSPVPKELEQLWLNFKDQQKAEGKSIRSSSGFSGKGFKF
DETEHALANERKKLQKAALGLQDSDDEDTALDIDEQIESMFNSKKRVKDLSAPGGGGGGG
GGASVSAAAAGALAGLVMPSAGNIQKLEIAKRLALKINAQKNLGAEAQDVMQQATNAILR
GGTILAPSVSAKTIAEQLAEKINAKLNYIPVEKMEEERQNAEQSETIKRYEEELEINDFP
QTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAK
AEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagagtcgaggcactaccgaaagcggtcggcctcccggggccggtcgggcagc
cggtcgaagagccgctctccggagaagcgctcgaagcgcgaggacagggctggctcccgt
aaccgcgaccgcgaccgcggcaggagagagcggtcgcgcagcagggaccgccgccgctca
cgatcccgcgacaggaagcggcccaggcgctccaggagcagggagaggaggcgcagccgc
agtcgggagcgtaggaggagccgcagcaggcacaggtctgccagcccgagcaagagccgc
aagaacgaggaccggtccaagagtaaggaaagatctgacaaccccgagcagtccgcagag
aagaagaagattaaggaagagaaggaggaagagaaggttgaagatcagcaggactttgac
cagaaccggctggaggaggagatgaggaagaggaaggagcgggtggaaaagtggcgggag
gagcagaggaggaaggccatggagaacatcggcgagctgaagagggagctggaggagatg
aagcagggcaagaagtggagtctggaggacgatgacgatgacgatgaggaggccccggcc
cccgtggagccggaggaggaagaggaggccacggcggccgttcccgaggaggccacgccc
atggaggaggaggtgggcgaggaggtggacccgctggacgcctacatggaggaggtgaag
gaggaggtgaagaagttcaacatgggctccatgcgcggcggagacaagaagggggtgatg
aaggtgaccaaggtgatgacggttgtcaccacgaagaaggccccacacaccaccaagaag
aagggagagctgatggagaatgaccaggacgccatggagtactcctcggaggaagaggaa
gtggacctgcagacggcgctgaccggctaccagaccaagcagcggaaggttctggagccc
gtggatcacaagaagatcgagtacgacccttaccgcaagaacttctacgtggaggtgcca
gagctggccaagatgacaccggaggaggtgaacgtgtacaggctggagctggagggtatc
acagtgaaggggaaagggtgccccaaacccataaaaacctgggtgcagtgcgggacctcc
atgaagatcctgtgcgccctcaaaaagcacagctacgagaagcccacgcccatccagacc
caggccattcccgccatcatgtccgggcgtgacctgatcggcatcgccaagaccggcagc
gggaagaccatcgccttcctcctgcccatgttccgccacatcctggaccagaggcccctg
gaggaggccgagggccccatcgcggtgataatgacccccaccagggagctggctctgcag
atcaccaaggagtgcaagaagttctccaagccgctggcgctgagggtggtgtgcgtgtac
ggagggaccgggatcagtgagcagatcgctgagctgaagagaggggcggagatcatcgtc
tgtacgccggggagaatgattgacatgttaggtgccaacagtgggcgggtcactaatctc
cgacgggtcacgtacgtggtggtggacgaagcggaccggatgttcgacatggggttcgag
ccgcaggtaatgcgcattgtggataacatccgaccggaccggcagaccgtcatgttctcc
gccaccttcccgcgggccatggaggccctggcccggaggatcctgctcaagcccatcgag
gtgcaagtgggaggcaggagcgtcgtctgctccgacgtggagcagcacgtgatcgtgatc
gaggaggagaataagtttctgaagctgttggagatcctggggcattaccaggagaagggc
tcggtcatcatcttcgtggacaagcaggagcacgccgacgggctgctgaaggacctgatg
aaggcctcctacccctgcatgtctctgcacggaggaatcgaccagtacgaccgggacagc
atcatcaacgactttaagaacggggcgtgccggctcatggtggccacctcggtggcggcc
cgcgggctggacgtgaagcacctgatcctggtggtgaactacaactgccccaaccactac
gaggactacgtgcaccgcgcggggcggaccggccgcgcgggcaacaaggggttcgcgtac
acgttcatcacggaggaccaggtgcggtacgcgggcgacattatcaaggccctggaactt
tccggatcccccgtgcccaaagagctggagcagctgtggctcaacttcaaagaccagcag
aaagcggaggggaagagcatcaggagcagcagcgggttctcggggaagggcttcaagttc
gacgagacggagcacgccctcgccaacgagcgcaagaagctgcagaaggccgcgctgggc
ctgcaggactctgacgacgaggacaccgcgctggacattgacgagcagatcgagagcatg
ttcaactctaagaagcgggtgaaggacctgtcggcccccgggggcgggggcgggggaggg
ggcggggcctcggtcagcgcggcggcggccggggccctggccggcctggtcatgccctcc
gccggaaacatccagaagctggagatcgccaagcggctggcgctgaagatcaacgcccag
aagaacctgggggctgaggcgcaggatgtgatgcaacaggccaccaacgccatcctgcgg
gggggcaccatcctggccccctccgtctccgccaaaaccatcgccgagcagctggcggag
aagatcaacgccaagctcaactacatccccgtggagaagatggaggaggagcggcagaac
gccgagcagtccgaaaccatcaagcgctacgaggaggagctggagatcaacgacttcccc
cagacggcgaggtggaaggtcacgtctaaggaggcgctccagcggatcggggagtactcc
gaggcggccatcaccatccggggaacatacttcccccccggaaaagagcccaaagagggc
gagaggaagatctatctggccatcgagagtgcgaacgagctggccgtgcagaaggccaaa
gctgaaatcaccaggctcatcaaagaggagctcatcagattacaaaactcctaccagccg
accagcaaaggccgatacaaggtcttatag
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