Conger conger (European conger): 133133431
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Entry
133133431 CDS
T10633
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ccog Conger conger (European conger)
Pathway
ccog04140
Autophagy - animal
ccog04148
Efferocytosis
ccog05132
Salmonella infection
Brite
Membrane trafficking [BR:
ccog04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
133133431 (vps39)
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Gene cluster
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Other DBs
NCBI-GeneID:
133133431
NCBI-ProteinID:
XP_061105516
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Position
1:10036011..10064353
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AA seq
876 aa
AA seq
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MHDAYESVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAASNRFEVTLEKSLK
NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITAVSKAKGASLFACDLQHAGTGE
AKLRMCVAVKKKLQLYYWKDREFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRVD
GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFVTSAGPNIVYVASNHFVWRLVPVSI
ATQIRQLLQDKQFELALQLAKMKDDSDGDKRQQIHHIQNLYAFNLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPSDYRKQLHYPNPLPSLSGPELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEES
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGMENLG
IIFEFSPWVLKICPEDGLKIFTEDLPEVETLPRHKVLNFLKEGFKEMAVPYLEHILHVWE
DKEPEFHNVLIQLYLEKVQGLMKQYLNSLPEGVPPVAAGKEEGELGEYRNKLLSFLDISS
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHQHYDRETD
GNRDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALHVLELHHSKLNTTKAINLLP
ANTQIQEIRVFLESVLEEKAQKKRFNQVLKSLLQAEFLRVQEERIFHQQVKCIITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPTEL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcctatgagtccgtgccgattttggagaagctaccgcttcagattgactgc
ctggcggcctgggaggactggcttcttgtcgggaccaagccaggccacctactgctttac
cgcatcaagaaggatgcagcgagcaacaggtttgaagtgactctggagaaatccctcaag
aacttctccaagaaaattcagcagctgtttgtcgtgtctcagtacaagatcctggtcagc
ctgctcgagaacaacatccatgtgcatgacctcttgaccttccagcaaatcactgctgtg
tcaaaggccaagggagcctctctctttgcatgtgacttgcagcatgccggcacaggagag
gccaaactgaggatgtgcgtggctgtaaagaagaagctccagttatactactggaaggac
agggagttccatgagctgcagggggattttgctgcgccagacattccgaagtccatggcg
tggtgcgagaactccatctgtgtgggattcaaacgagactactacctgatccgggtggac
gggcgtggctccatcaaagagctcttccctacggggaagcagctggagccgctggtcgcc
ccgttggccgacgggaaagtggcagttggtcaggacgacctcaccgtggtcctgaacgag
gaaggtgtctgcacccagaagtgcgccctcaactggaccgacatacctatcgcaatggag
caccagcccccctacatcatcgccgtgcttccccgctacgtggagatccgcaccttcgag
ccccgcctgctggtgcagagtgtggagctgcagaggccccgcttcgtcacctccgctggg
cccaacatcgtgtacgttgccagcaaccattttgtgtggcgccttgtgcccgtctccata
gcaacccagatccggcagctcctgcaggacaaacagtttgagctggccctgcagctggcg
aagatgaaggacgactcagacggggacaagaggcagcagatccaccacatccagaatctg
tacgccttcaacctcttctgtcagaagcgcttcgacgactccatgcaggtgttcgccaag
ttgggcacagatcccacccatgtgattgggctgtacccagacctgctgccctcagactac
aggaaacagctgcactaccccaaccccctcccctccctgtccggccccgagctggagaag
gcacacctggcgctcatcgactacctgacgcagaaacgcagtcacctggtgaagcagctc
aacgactctgatccgtccaccacctctccgctcatggaggggacccccaccatcaagagc
cgcaagaaactgctgcagatcatcgacaccacgctactcaagtgctatctgcacaccaat
gtggccctggtatcgccccttctgagactggagaataaccactgtcacatagaggagagc
gagtacgtgctgaaaaaggcccacaagtacagtgagctcataatcctctatgagaagaag
ggcctgcaccagaaagctctgcaggtgctgctggatcagtccaccaaggccaactctcca
ctgaagggccacgagcgcaccgtgcagtacctccagaggctggggatggagaacctgggg
atcatctttgagttctccccctgggtgctgaagatctgccctgaagacgggctcaagatc
ttcacagaggacctcccggaggtggagacccttcccaggcacaaggtgctgaacttcctg
aaggagggcttcaaggagatggccgtcccttacctggagcacatcctccacgtgtgggag
gacaaggagccggagttccacaacgtgctgatccagctctacctggagaaggtgcagggc
ctgatgaagcagtacctcaactctctacctgagggcgtacccccagtggctgctgggaag
gaggagggagagctgggggagtacagaaacaagctgttgagtttcctggacatctcctcc
agctatgagccagccaggctcatcagcgacttcccctttgacggtctgctggaggagaga
gccctgctgctgggccgtatggggaagcatgagcaggcactcttcatctacgtgcacatc
ctgaaggacacccgcatggcagaggagtactgtcaccagcattatgacagggagacggat
ggcaacagagatgtgtatctgtctctgctgcgcatgtacctgtctcccccggacgtgcac
tgtctggggcccattaagatggagctgtctgagcctcaggccaacctacaggcagcgctg
catgtcctggagctccaccacagcaagctcaacaccaccaaggcgataaacctgctcccg
gcgaacacgcagatccaggagatcagggtgtttctggagagcgtgctggaggaaaaggcc
cagaagaaacgcttcaaccaggtgctcaagagcctgctgcaggccgagttcctacgggtc
caggaggagaggatcttccaccagcaggtgaagtgcatcatcacggaggagaagacctgc
cgagtgtgcaagaagaagattgggaacagtgcttttgccaggtaccccaatggcgtggta
gtgcattatttctgctgtaaggatcgcaatacgtgccctaccgaactgtga
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