Conger conger (European conger): 133134128
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Entry
133134128 CDS
T10633
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133134128 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133134128 (nup98)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133134128 (nup98)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133134128 (nup98)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133134128 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
133134128
NCBI-ProteinID:
XP_061106545
LinkDB
All DBs
Position
7:complement(61152860..61201200)
Genome browser
AA seq
1833 aa
AA seq
DB search
MFNKSFGAPFGGGTGAFGTSSTFGQQNTGFGATGGFGGSAFGTANSTGGLFGATQNKPVV
TANPQPSFTGAGRGGGLFGSNTFNQPVTSSTSAGFGFGAAGGASNSLFGSAATGGGLFSQ
PNNAFAANKPATFGTFGTSTSAGGLFGTTNTNSNPFGGASASLFGASGFTATQSGTTLKF
NPPTGSDTMVKGGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAAGTG
VLFGAPAAATPSTAAGLFGSSATNTGFSFGQNKTGFGASAGAFGAATGSLFGQPAPQTQQ
ATSLFSKPFGQATTVPNTGFSFGNTNTMGQPNTSSMGLFGNTVASQAGGLFGNTANTSTA
TAFGTATGLFGPTNTGFGAAGTQNLFGNKPAGFGTTTTSAPSFGNATGLFGNKPTLTLGA
NPNTSNFAGFGANTAGGGLFGAKTAAGGLGAGIGAPFGTTVGAGQPSLFGNTQNKLGSTL
GAVGAFGASTFNTGASGLPFGAAQQPVALTDPSAAAAQQAVLQQQISALAYSPFGDSPLF
RNPLSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALTSSSSSKSQLFDGL
DDDEPSLSNGSFMPRKSIKKLVLKNLNGSSLYSPVSREAEDLASPAEYPENGLSGSLEEP
RPPEEEEEEEAESERVDEDPEVTKFYTNPIAKPVPQALEGRASRQSQALQDTIAELNVRP
AGSSNGLELSSEDASLADDSAQEEQEPDPLAPQHPAGIVLCRVGYYTIPPLEELGRMLND
SGDCVLENFTVGRKGYGSIFFPGEVNLTGLNLDEIVHFRRKEVIVYPDDKAKPPVGHGLN
RRAEVTLDGVWPNDKTTCTQIKSPERLTDMNYEGRLENACRKQGARFLEYRPETGSWVFE
VAHFSKYGLQDSDEEEDVSPPIKADLKKLKTAPAVPPSHQQAALNGKATPQAQSSALLEL
LSRASEVDSDMADITQELPMEGEDPDSAPLEDTPAEPEPVSVSSHIASAKGINPHVLQIM
KSSLFVEDEEGELFPRLGLGSPAQGLDQSKDLSFLLPTPQRQSGGLLQARFSSGAGLFST
LPDAPFGGIPPKLARPSLTDPSRLSPWPSPGPSFRLPAPAPETPLRSVGAQRQPVLVAPA
CSVALGKGKLLMDAALFMGRSFRVGWGPNWALAHCGDPVSDLAATPRGPPADALEFGFLP
KMAKSKPIWESPFRVLVEQVVHVDAQDPEEALALLRRPLEIELKHCTVSLEESCPFIQPN
PGVQALQEYADWASQITTEPGATDDVVLHWRLVWTLCAALWGQLGELEPEAEHAGSYAQQ
LERRRSFSAWLGQCAAPRVEEEVERLDPHRSPVDAIFSYLSGHRVSQACKLAHKSGDQRL
TLLLSQAGGSQCSRDLLALQLLDWSRLQTDSFITEERLRIFTLLAGKPVWQSSDSCVNVC
AELDWQRCLAVHLWYLLPPTASVADALAAYQAAFQGTSEGQKYACAPLPPYLDPLQEEME
EVGEEQRPLYDVCFHLLQLYSDRHSSLQQLLDPCTVTSNRLDYRLSWHLWNVLQALNYTH
LSQQRQGLLHASFAAQLESAGLWEMAVFVLLHIPDCTHRERAVRAMLDLHCPLVETEDSA
ARERFLTVKLLVPVQWIHEAKATRAHREGDRHREALHLYRAGHWNQCHRLVIQHLAADCI
INENHDYLLEFLEGLSAPDRSVQIQDWDSAGRVFLDYIHVIQSLRHIQQLESPGFELERL
HTEVTSLCSRVELIPCATAKDRLSQSEMAKRVANILRAVLSLQQGADSGSGPPQVPLRLL
APLISRLPMPEDYALEELRGLTQSYLRQLVAGQ
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatctttcggcgcgccctttgggggaggcaccggggcttttggaacttcg
tccacgtttggtcaacagaatactggttttggagccacgggtgggtttgggggttctgcg
tttggaaccgctaacagcaccgggggactctttggggccactcagaacaagccagtggtg
acagccaacccccagcccagcttcactggagctggtcgcggaggtgggctcttcggctcc
aacaccttcaaccagccggtgacgtcgtccaccagcgcggggtttgggttcggggcggcc
ggcggagcctccaacagcctcttcggcagcgccgccaccggcggggggctcttctcgcag
cccaacaatgccttcgccgccaacaagcccgccaccttcggcaccttcggcaccagcacg
agcgccgggggcctgttcgggacgacgaacaccaactccaaccccttcggcggagcctcg
gcctccctgttcggcgcctcgggtttcaccgccacgcagtccgggacgacgctcaagttc
aaccccccgacaggaagtgacacgatggtgaaagggggcgtgaccaccagcatcaacacc
aagcaccagtgcatcacggccatgaaggagtacgagaacaagtccctggaggagctgcgt
ctggaggactaccaggccggcaggaagggcccctcgaaccccatggctgcgggaaccggg
gtccttttcggggcgcccgccgccgccacccccagcaccgccgccgggctcttcggctcg
tccgccaccaacacgggcttctccttcgggcagaacaagaccggcttcggagcgagtgcg
ggcgcgttcggcgcggccacgggcagcctgttcggccagccggccccacagacccagcag
gccaccagcctgttcagcaagcccttcgggcaggccaccaccgtccccaacaccggcttc
tccttcggcaacaccaacaccatgggccagcccaacaccagcagcatgggtctgtttggg
aacacggttgcgtctcaggcgggaggtctgtttgggaacacggcgaacaccagcacagcc
acggccttcggcacggccaccgggctgttcggcccgaccaacaccggcttcggcgccgcg
ggaacgcagaacctgttcgggaacaaaccggccggttttgggaccaccaccaccagcgcg
ccctcgtttggcaacgccaccggcctgttcggcaacaagcccaccctaacgctgggcgcc
aaccccaacacctccaacttcgcaggctttggggccaacacggctggaggtggtcttttt
ggagcgaagaccgcagcagggggactgggagcaggcatcggggcgccgtttggaacgacc
gttggcgcggggcagccgtccctgttcgggaacacgcagaacaagctgggctccaccctg
ggcgcggtgggggcgttcggggcctccaccttcaataccggcgcctcaggcctgccgttt
ggagccgcgcagcagcctgtggctctgacagacccgagcgcggcggcggcccagcaggcc
gtgctgcagcagcagatcagcgctctggcctactcgccgttcggagactcgcccctcttc
aggaacccgctgtctgaccccaagaagaaggaggagcgtctcaaacccaccaatccggcg
gcccagaaggcgctgaccacgcccactcactacaagctgacgccccggcccgccacgcgg
gtgcggcccaaagccctgacgtcctccagctcctccaagtcccagctgttcgacgggctg
gatgacgacgagccctcgctctccaacggctccttcatgcccaggaaaagcataaagaag
ctggtgctgaagaacctgaacggcagcagcctgtactcccccgtgagcagggaggctgag
gacctggcctccccggcagagtaccccgaaaacgggctgagtggcagcctggaggaacct
cggcccccggaggaagaggaggaggaagaggcggagtcggagagggtggacgaggacccg
gaggtgaccaagttctacaccaaccccatcgccaagcccgtcccccaggcgctggagggc
cgggccagccggcagagccaggccctgcaggacaccatcgccgagctcaacgtgcggccg
gccgggtcctccaacggcctggagctcagcagtgaagacgcctcgctcgccgacgactcc
gcccaggaggagcaggagcccgaccccctggccccgcaacaccctgctgggatcgtcctg
tgcagggtggggtactacaccatcccccccctggaggagctgggccgcatgctgaacgac
agcggggactgcgtgctggagaacttcaccgtgggccgcaagggctacggctccatcttc
ttccccggggaggtgaacctgaccggcctgaacctggacgagatcgtgcacttccgacgg
aaggaggtcatcgtgtaccccgacgacaaggccaagccccccgtgggccacggcctcaac
aggcgagcagaggtcacgctggacggggtgtggcccaacgacaaaaccacctgcacccag
atcaagagcccggagcgcctgaccgatatgaactacgagggccggctggagaacgcctgc
cgcaagcagggggcccgcttcctggagtaccggcccgagaccgggtcctgggtgttcgag
gtggcccacttctctaagtacggactgcaggactctgatgaggaagaggacgtgtccccg
cccatcaaagcggacctgaagaagctgaagaccgcccctgcagttcctccctcccaccag
caggcggcgctgaatgggaaagccacgccgcaggcacagagctcggccctcctggagctc
ctgagccgggcgtcggaggtggacagcgacatggccgacatcacgcaggagctgcccatg
gagggagaggacccagactccgcccccctggaggacacgcccgccgaacccgagcccgtc
tccgtctcctcccacatcgcctctgccaagggcatcaacccccacgtcctgcagataatg
aagtcctctctgttcgtggaggatgaggagggagagctcttccccagactcgggctaggt
tcgcctgcgcagggactcgaccaatcaaaagacctgagcttccttctgcccaccccccag
aggcagtcgggagggctgctccaggcccggttcagctcgggggcggggctcttctccacc
ctcccggacgccccgttcgggggcatcccgcccaagctggcgcggccgtccctgacggac
ccctcccgcctgtccccctggccctcgccggggccctcgttccggctgccggccccggcc
cccgagaccccgctccgcagcgtgggggcccagcgccagcccgtcctggtggcccccgcc
tgctccgtggccctgggcaagggcaagctgctgatggacgccgcgctcttcatgggccgc
tccttccgcgtgggctgggggcccaactgggccctggcgcactgcggggaccccgtcagc
gacctcgctgccacgcccaggggcccgccggccgacgcactcgagttcggcttcctgccc
aagatggccaagagcaagccgatttgggagagcccgttccgggtgctggtggagcaggtg
gtgcatgtggacgcgcaggacccggaggaggccctggctctgctgcggcgccccctggag
atcgagctgaagcactgcacggtcagcctggaggagtcctgccccttcatccagcccaac
cccggcgtgcaggccctgcaggagtacgctgactgggccagccagatcaccacggagcct
ggagctacagacgacgtggtgctgcactggcggctggtgtggaccctgtgcgcggccctg
tgggggcagctgggggagctggagccggaagcggagcatgctgggagctacgcgcagcag
ctggagcggaggcggagcttctcggcgtggctggggcagtgcgccgccccgcgcgtggag
gaggaggtggagcgcctggacccccaccgcagccccgtggacgccatcttcagctacctg
agcggccaccgcgtcagccaggcctgcaagctggcccacaaatccggggaccagcggctg
accctgctgctgtcccaggcgggcgggtcccagtgcagccgggacctgctggccctgcag
ctgctggactggagccgcctgcagacagacagcttcatcaccgaggagcgcctgcgcata
ttcaccctgctcgctggaaaaccagtgtggcagagctcggacagctgtgtgaacgtgtgc
gcggagctggactggcagcgctgcctggcggtgcacctgtggtacctgctcccccccacc
gcctctgtcgccgacgccctggctgcgtaccaggctgccttccagggcaccagtgagggg
cagaagtatgcctgtgccccgctgcccccgtacctggaccccctgcaggaggagatggag
gaggtgggggaggagcagagacccctgtatgacgtctgtttccacctgctccagctctac
agcgaccgtcactccagcctgcagcagctgttggacccctgcacggtcaccagtaaccgg
ctggactatcggctcagctggcacctgtggaacgtgctgcaggcgctcaactacacgcac
ctgtcccagcagcgccagggccttctgcacgccagcttcgccgcccagctggagagcgcg
ggactgtgggaaatggccgtcttcgtgctgctgcacataccggactgcacgcaccgtgag
cgggcggtccgagccatgctggacctgcactgccccctggtggagacggaggactctgcg
gcgcgggagcgcttcctgacggtgaagctgctggttccggtccagtggatccacgaggcc
aaggccacccgggcccacagggagggggaccggcaccgcgaggccctgcacctgtaccgg
gccggccactggaaccagtgccaccggctggtcatccagcacctggccgcagactgcatc
atcaatgagaaccacgactacctgctggagttcctggaggggctgtcggctccggaccgt
tccgtgcagatccaggactgggactcggccggacgggtgtttctggactacatccacgtc
atccagtccctgcgacacatccagcagctggagagccccgggtttgagctggagaggctg
cacactgaggtgacgtctctctgcagccgggtcgagctcatcccctgcgccacggccaag
gaccggctgtcccaatcagagatggcgaagcgcgtggcgaacatcctgcgtgcggtgctg
tccctccagcagggggcagactcgggctcagggccgccccaggtcccgctgcgtctcctg
gccccgctcatcagccggctgcccatgccggaggactacgccctggaggagctgcgcggc
ctcacccaatcatacctgcggcagctcgtcgccggccaatga
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