Conger conger (European conger): 133134733
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Entry
133134733 CDS
T10633
Symbol
cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator isoform X1
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ccog Conger conger (European conger)
Pathway
ccog02010
ABC transporters
ccog04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133134733 (cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133134733 (cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccog02000
]
133134733 (cftr)
Enzymes [BR:
ccog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
133134733 (cftr)
Transporters [BR:
ccog02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
133134733 (cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
AAA_21
DUF87
SMC_N
AAA_29
AAA_16
RsgA_GTPase
T2SSE
MMR_HSR1
nSTAND3
FtsK_SpoIIIE
MeaB
nSTAND1
AAA_23
NB-ARC
Dynamin_N
Zeta_toxin
NTPase_1
Motif
Other DBs
NCBI-GeneID:
133134733
NCBI-ProteinID:
XP_061107054
LinkDB
All DBs
Position
8:51227073..51256894
Genome browser
AA seq
1477 aa
AA seq
DB search
MQKSPVEDANFLSRFFFCWTSAILRKGYRQKLELSDVYKVPSFDTADTLSERLEREWDRE
LASSKKKPRLFNALRRCFFWPFAFYGILLYFGEASKTVQPQLLGRIIASFDPFHAEEREQ
GFFLALGLCLLFVARFMLLQPAIFGLHHLGMQIRIALFSLIYKKTLKLSSRVLDKISTGQ
LVSLMSAHLNKLDESLGLAHFVWITPLQCILCVGLIWELIEASALCALAALLVLAIFQAC
LSQRMGPYRAKRAKLINRRLALTSEIVENIHSVKAYGWEEIMETIIKNIRQDEMTLTRRI
GSLRYFYSSAYFYSAFLVIIATLVPYALQQSIILRRIFTTLSYCMVLRMTLTRQLPNSIQ
MWYDTLALIDKLEDYLTKEEYKVLEYNLTTTEVELMNVTASWDEGIGELFEKIKQENKEN
GHPNGDSGHFFTNLYVTPVLKNISLHLEKGKMLAVAGSTGSGKSSLLMMILGELVPSEGK
IKHSGRISFSPQTSWIMPGTIRENIVFGLTYDEYRYTSVIKACQLEEDLALLPEKDRTPL
LEGGLTLSGGQRARIGLARAVYKDADLYLLDSPFTHLDIVTEKDIFESCVCRLMASKTRI
VVTSKLEHLKRADRILLLHNGVCYFYGTFGELQSQRPDFSSLLLGLGAYDNINAERRGSI
LTETLRRVSVDETAGHHPEPPRPPFRQPPPPTPTAGDAPDKRKPSLILNPLAAARKFSVA
QHPEEDPGREAPQRRFSVVPEDDQVEEVLPRSNVYHPGINFPGQRRQSVLAFITNAQGQG
RREQMQSSFSRKLSITPQSELASELDIYARRLSNDSMYDISEEMDEEDMEECFADEREHV
FETTSWSTYFRYLSTNKNLVYILVFIILVFLIEVAGSVIGILLITDKIWTEENETTYPNS
SQGSPYAVIVTPTSAYYIVYIYVATSESVLALGFLRGLPLIHTLLTVSKKLHQQMLQAVL
RAPMAVLNTMKSGRIMNRFTKDMATIDDMLPLILFDFIQLTLIVLGAIFVVSIMRPYIFL
AAIPLAVTFVLLRKYFLRTAQQLKQLEAEARSPIFSHLILSLRGLWTIRAFGRQTYFETL
FHKALNTHTANWYLYLSTLRWFLFRIDMIFVLFFTTTAFISVGTNRDKPGEIGIIITLAM
LILGTFQWAVITSITVDGLMRSVDRVFKFIDLPSEEPKHTTRVKNTDVVIENPHADDGWP
SRGQMEVRDLTVKYTEAGRSVLQKLSFNIDGGHRVGVLGRTGSGKSTLLSALLRLASTDG
DISIDGVSWNSVPLQTWRKAFGVVPQKIFILTGSFRMNLDPCGRHSDEELWKVTEEVGLK
SVIEQFPDKLDFQLEDGGYVLSNGHKQLVCLARSILSKARILLLDEPSAYLDPITLQILR
KTLKHSFSNCTVMLSEHRVEPLLECQSFLMIEGSSVKSYDSIQKLLNEMSQLKQAISPTE
RLKLFPTHRRSSSKRAPQPKISALQEEAEDEVQDTRL
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaatctccagtggaagatgcgaacttcctatcaagatttttcttctgttggaca
tcagcaattttgagaaagggatacaggcagaagttggagctgtcagatgtgtataaagtg
ccctcttttgatacagctgataccctctctgagcgcttggaaagagaatgggaccgagaa
cttgcatcctccaagaaaaaacccagactcttcaatgctctacgccgttgtttcttctgg
ccctttgccttttatggcatcctgttgtactttggggaagcctcaaagaccgtgcagcct
cagctcctggggcgaatcatcgcctcgtttgaccctttccacgcagaggagcgggagcag
ggcttcttcctggccctggggctctgcctgctgtttgtggcacgcttcatgcttctccag
ccggccatctttggcctgcaccatctgggcatgcagatccgtatcgccctcttcagcttg
atctataaaaagaccttaaagctgtccagccgggtcctggacaagattagcactgggcag
ctggttagcctgatgtctgcacacttgaataagctggatgagagcctgggtctggcgcac
tttgtgtggatcacacccctgcagtgcattctgtgtgtggggctgatctgggagcttatt
gaggcctcggccctctgtgccctggctgccctcttggtgctggcgatcttccaggcctgt
ctgtctcagaggatgggcccttacagggctaagagagccaagctgatcaaccggaggctg
gcactgacctcagagatagtggagaacatccactctgtgaaggcctatggctgggaggag
atcatggagactatcattaagaacatcaggcaggatgagatgactttaacccggaggatc
ggctccctgcgctacttctacagctcggcgtacttctactcggccttcttggtcatcatt
gccaccctggtgccgtacgccctccagcagagcatcatcctgcgccgtatcttcaccacg
ctctcctactgcatggtgctgcgcatgaccctcacccgccagctgcccaactccatacag
atgtggtacgacacgctggcgctcatcgacaagctggaggactatctcacaaaagaggag
tacaaagtgttggagtacaatctaaccacgactgaagtggagcttatgaatgtcactgcc
tcttgggacgagggaataggcgaactcttcgaaaagataaagcaggagaacaaggagaac
ggacaccctaatggagattcaggccacttctttaccaacctgtatgtgaccccggtgctg
aagaacatcagcttacacctggagaaggggaagatgctggccgtggctgggtcgactgga
tcaggcaagagttctctcctcatgatgattctgggggagctggttccctcggaggggaag
atcaagcacagcggccgcatctccttctccccacagacctcctggatcatgcccggcacc
atccgcgaaaatatcgtctttggcctgacgtatgatgagtaccgctacaccagtgtcatc
aaggcctgtcagctggaggaggacctcgccctgttgccggaaaaagacaggacccccctg
ttagagggggggttgaccttgagcgggggacagagggcacggatcggtctggccagagca
gtgtacaaagatgcagatctttacctgctggacagccccttcacccacctggacattgtg
acagaaaaagacatttttgaaagctgtgtgtgcagactgatggcatcgaagacacggatc
gtggtcacgagcaagctggagcacctgaaacgtgccgaccggatcctgctgctccacaac
ggcgtgtgctacttctacggcacgttcggcgagctgcagtcccagcggcccgacttcagc
tccctgctgctcggcctgggggcctacgacaacatcaacgccgagcggcgcggctccatc
ctgaccgagacgctccggcgcgtcagcgtggacgagaccgcgggccaccaccccgagccg
ccccggccccccttcagacagccgcccccgcccacgcccaccgccggcgacgccccggac
aagaggaagccctcgctcatcctcaaccccctggcggccgctcggaagttctcggtggcc
cagcacccggaggaggacccggggcgggaggccccgcagcgccgcttctccgtggtgccc
gaggacgaccaggtggaggaggtgctgccccgcagcaacgtctaccaccccgggatcaac
ttccccgggcagcgccgccagtccgtgctggccttcatcaccaacgcccagggccagggc
cgccgcgagcagatgcagtcctccttcagccggaagctgtccatcacgccccagagcgag
ctggcctccgagctggacatctacgcccggcgcctgtccaacgacagcatgtatgacatc
agcgaggagatggatgaggaagacatggaggagtgttttgcagatgagcgagaacatgtc
tttgaaactacctcatggagcacatacttccgatacttatcaacgaacaagaaccttgtc
tatattctcgtctttatcatcttggtcttcttgattgaggtggctgggtctgtgattggg
atacttttaatcactgataagatctggacggaggagaacgagacgacgtacccaaactct
tcccaggggtctccctacgcagtgatcgtcacgcccaccagtgcgtactacattgtttac
atctacgtggcgacgtcggagagcgtgctggctctgggcttcctgcgggggctgcctctc
attcacaccctgctcaccgtctccaagaagctgcaccagcagatgctgcaagccgtgctg
agggcgcccatggccgtgctcaacaccatgaagtcagggcgaattatgaacagattcacc
aaagacatggcgaccattgatgacatgctacctctcatcctatttgatttcatacagctg
accctgattgtgctgggagccatctttgtggtgtctataatgcggccttacatcttcctt
gctgccatccctctggctgtcacctttgtgttactgaggaagtacttcttgcgcacagca
cagcagctgaagcagctggaggctgaagctcggagccccatcttctcgcacctgatcctc
tccctcaggggtttgtggacgatacgagcctttggccggcagacctactttgagaccctc
ttccacaaggccctcaacacccacacggccaactggtacctgtacctgtccacgctgcgc
tggttcctcttccgcatcgacatgatcttcgtcctcttcttcaccaccaccgctttcatc
tccgtgggaaccaaccgtgataagcccggtgaaattggcatcattatcaccctggcgatg
ttgattctgggaaccttccagtgggctgttatcaccagcatcactgtggacggcctgatg
cgttctgtggatcgggtctttaaattcatagatcttccatccgaggagcccaagcacacg
acccgggtcaagaacacagatgtggtgattgaaaacccccatgcagatgatggctggcca
tcccgcggtcagatggaggttcgagacctcactgtgaagtacacagaagcagggcggtca
gtcctccagaagctgtcctttaacattgatggtggacacagggtgggagtcctggggaga
acgggctcagggaagagcactctgctctccgctctgctgaggctggcgtccacggacggg
gacatctccatcgacggcgtctcatggaactccgtccccctccagacctggaggaaggcc
tttggggtagtgccccagaaaatcttcatcttgacggggtcgtttcgcatgaatctggac
ccgtgtggcagacactcagatgaggaactctggaaagttacagaggaggtggggctgaag
tcggtcatcgagcagttcccagacaagctggacttccagctggaggacgggggctatgtg
ctgagcaacgggcataagcagctggtgtgtctggcccggtccatcctcagcaaggcccga
atcctgctgctggacgagcccagcgcctacctggaccccattactttgcagatcctgagg
aagacgctgaaacattccttctccaactgcaccgtcatgctgtccgaacaccgggtggag
cctctcctggagtgccagtccttcctgatgatcgagggcagctcggtgaagtcctacgac
tccatccagaagcttctgaacgagatgagccagctgaagcaggccatcagtcccacggag
cggctgaagctgtttcccacacaccgtaggagctccagcaagcgtgcgccccagcccaaa
atcagcgccctgcaggaggaggccgaggacgaggtgcaggacacgcgcctctga
DBGET
integrated database retrieval system
