Conger conger (European conger): 133134824
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Entry
133134824 CDS
T10633
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133134824 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133134824 (smarca5)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133134824 (smarca5)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
133134824 (smarca5)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
133134824 (smarca5)
RSF complex
133134824 (smarca5)
WICH complex
133134824 (smarca5)
B-WICH complex
133134824 (smarca5)
NORC complex
133134824 (smarca5)
BRF complex
133134824 (smarca5)
NuRF complex (fruit fly)
133134824 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
133134824
NCBI-ProteinID:
XP_061107268
LinkDB
All DBs
Position
8:13485866..13498959
Genome browser
AA seq
1024 aa
AA seq
DB search
MSSTENNSVEAERRMEDEHEGEDGKAEPEEGGQEVASPSKLSDDKPPFLPAYEEKMQTDR
TNRFEYLLKQTEVFAHFIQPAAQKTPTSPLKMKPGRPRLKKDEKQTLLSAGDNRHRRTEQ
EEDEELLSENSKATNVCTRFDESPSYVKNGKLRDYQIRGLNWLISLYENGINGILADEMG
LGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFNRWVPSLKAVCLIGNREERN
AFIRDVLLPGEWDTCVTSYEMLIREKAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFK
TTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDAWFDTNNCLGDQKLVERLHIVL
RPFLLRRIKADVEKSLLPKKEVKMYVGLSKMQREWYTKILMKDIDILNSAGKMDKMRLLN
VLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKLREQGSRVLIFSQM
TRMLDILEDYCMWRNYCYCRLDGQTAHDERQKSINAYNEPNSSKFLFMLSTRAGGLGINL
ATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITENTVEERIVERAEMKLRLD
SIVIQQGRLVDQNLNKLGKDEMLSIIRHGATHVFASKESEITDEDIDAILERGEKKTMEM
KEKMSNMGESSLRNFTMENENSVYNFEGEDYREKKKIVTEWIEPPKRERKANYAVDAYFR
EALRVSEPKVPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVPRNPEIPNS
AQVQKEEQRKIDEADPLSEEELEEKENLLSQGFTIWNKRDFNQFIKANEKWGRDDIENIA
REVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYK
APFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCIRNSPQFRFDWFL
KSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPRTSSAQKRKADGTPDGRGRRK
KLKM
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtactgaaaacaacagcgtggaggcagagcggcggatggaggatgagcatgaa
ggagaggatggaaaggctgagcctgaagaaggtggtcaggaagtggcatcgccctctaaa
ctgtctgacgacaaaccgcctttcttgccagcgtatgaagagaaaatgcaaacggaccgc
actaacagatttgagtacctgctgaagcagacggaggtgttcgctcacttcattcagcct
gccgcgcagaaaacccccacctcccccctgaagatgaagcccggccgcccccgtctgaag
aaggatgagaaacagaccctcctctccgctggggacaatcgtcaccgtcgcaccgagcag
gaggaggatgaggagctgctgagcgagaacagcaaggccaccaacgtgtgcacccgcttc
gacgagtctccctcctacgtgaagaacggtaaactgagggactatcaaatcagagggtta
aactggctgatttctctatacgagaatggaatcaacgggatccttgccgatgaaatgggt
ctggggaagaccctgcagaccatctccctgctgggctacatgaagcactacagaaacatc
cctgggccgcacatggtgttggtgcccaaatccaccctgtacaactggatgaacgagttc
aaccgctgggtgccctcgctcaaagccgtctgtctcatcggaaaccgggaagaaaggaac
gccttcatccgggacgtgctgctaccgggggaatgggacacctgtgtgacctcctacgag
atgctcatccgggagaaggccgtgttcaagaagttcaactggaggtacctggtcatcgat
gaggcccacaggatcaaaaacgagaagtcgaagctttcggagatcgtcagagagttcaag
acgaccaaccgcctgctgctcaccggaaccccccttcagaacaacctgcacgagctttgg
gccctgctcaacttcctgctccccgacgtgttcaactcctcagaggactttgatgcctgg
ttcgataccaacaactgcctcggggaccagaagctggtggagcgtttgcatattgtgctg
cggcccttcctgctgcgtcgtattaaagccgatgtggagaagtctctcctccctaaaaag
gaggtgaagatgtatgtaggtctgagcaagatgcagcgagaatggtacaccaagattctg
atgaaggacatcgacatcctgaactcggcagggaagatggacaaaatgcgtctcctcaac
gtcctgatgcagctgcgcaagtgctgtaaccacccctacctgttcgacggggccgagccc
ggccccccctacaccaccgacctgcacctggttgtcaacagcggcaagatggccgtgctg
gacaagcttctgcccaagctccgagagcaaggctcccgtgtgctgatcttcagccagatg
accaggatgctcgatattttggaggattactgcatgtggaggaactactgctactgccgc
ctggatggtcagaccgctcacgacgagagacagaaatcaatcaacgcctacaatgagcca
aacagcagcaagttcctcttcatgttgagcacccgtgctgggggtcttggcatcaatctg
gccaccgctgatgttgtcatcatctacgattccgactggaaccctcaagtagatctccag
gccatggaccgagctcacaggattggtcagaagaagcaggtgcgcgtgttccgcttcatc
acggagaacacggtggaggagaggatcgtggagagggccgagatgaagctcagactggac
tccattgtcattcagcaaggcaggctagtggaccagaacctgaataagctggggaaagac
gagatgctgtccatcatccgtcacggtgccacgcacgtgttcgcgtccaaggagagcgaa
atcacggatgaggacatcgacgccatcctggagagaggggagaaaaagacaatggagatg
aaagagaagatgtccaatatgggggagagctcactgaggaacttcaccatggagaacgag
aacagcgtgtacaacttcgaaggcgaggactatagagagaagaaaaagattgtcacagag
tggatcgagcccccgaagagagaacgcaaggccaactacgcagtggacgcgtacttcaga
gaagccctgcgtgtcagcgagcccaaagtgcccaaggctcctcggccccccaaacagccc
aatgtccaggacttccagttcttccccccacgcctgtttgagcttctggagaaagagatc
cttttctacaggaagaccatcggctacaaggttccccgaaatcccgagatccccaattca
gctcaggttcagaaggaggagcagaggaagatcgatgaggcagatccgctgtcggaggag
gagctggaggagaaggagaacctcctctctcagggcttcaccatttggaacaagcgcgac
ttcaaccagttcataaaggcgaacgagaaatgggggcgggacgacatcgagaacatcgcc
cgcgaggtggaaggcaaaactccggaggaggtcatggaatattccgcggtgttctgggag
cggtgcaatgagctgcaggacattgagaaaatcatggctcagatcgagaggggggaggcc
aggatccagaggcgcatcagcattaaaaaagcacttgacacaaagatcggccgctacaag
gcccccttccaccagctgaggatctcctacggcaccaacaagggcaagaactacacggag
gaggaggaccgcttcctcatctgcatgctgcacaagctgggcttcgacaaggagagcgtg
tacgacgagctccgccagtgcatccgcaactccccgcagttccgcttcgactggttcctc
aagtccaggacggccatggagctgcagaggcgctgcaacaccctgatcacgctgatcgag
cgagagaacatggagctggaggagcgggagaaggcggagaaaaagaagaggggtccacga
acatcgtcggcgcagaaacgcaaggcggacgggacgccggacggtcgagggcggagaaaa
aagctgaagatgtga
DBGET
integrated database retrieval system
