KEGG   Conger conger (European conger): 133134961
Entry
133134961         CDS       T10633                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ccog  Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccog03041]
    133134961 (smu1a)
Spliceosome [BR:ccog03041]
 Complex B
  Other components
   Complex B specific factors
    133134961 (smu1a)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR90_POC16_2nd LisH_TPL NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_BBS7 WD40_RFWD3 Beta-prop_RSE1_2nd Beta-prop_IP5PC_F PEP5_VPS11_N VPS8_N LisH LisH_PAC1 PROPPIN DUF7165 LisH_WDR26 Beta-prop_NOL10_N zf_topless DUF6923
Other DBs
NCBI-GeneID: 133134961
NCBI-ProteinID: XP_061107599
LinkDB
Position
8:56390789..56403288
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRVAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGSQDGKIKVWKIQSGQCLR
RFERAHSKGVTCLSFCKDSSQLLSASFDQTIRIHGLKSGKSLKEFRGHSSFVNEAAFTPD
GHYVVSASSDGTVKVWNVKTTECSNTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLISTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaagtggaatctgcagacgtgatccgtctgataatgcagtacctgaaggag
aacaacctgcaccgcaccctggccaccctgcaggaggagaccactgtgtcccttaacacg
gtggacagtatcgaaagctttgtggctgacataaacagcgggcactgggacacagttctg
caggccatccaatccctcaagctccctgacaagacgctcattgacctctacgagcaggtg
gttctggagctgatcgagctgcgagagttgggggcggcccgttctctgctgaggcagacc
gaccccatgatcatgctgaagcagacccagcccgagaggtacatccacctggagaacctg
ctggcccggtcctacttcgacccccgagaggcctatccggatggcagcagtaaggagaag
cggagggtggccattgcccaggccctggcaggggaagtgagtgtggtcccgccctctcgt
ctcatggctctgctcggccagtctctgaaatggcagcagcaccagggcctgctcccgccc
gggatgaccatcgatctgttcaggggcaaagccgctgtgaaagacgtggaggaggagcgc
ttccccacccagctcagccgacacatcaagtttggacagaagtcgcacgttgagtgcgcc
cgcttctcccccgacggccagtacctggtcaccggctccgtggacggcttcatcgaggtg
tggaatttcaccaccgggaaaatccggaaggatctgaagtaccaggctcaggacaacttc
atgatgatggacgacgcagttctgtgcatgtgtttcagccgagacactgagatgttggcc
acgggatcacaggatggcaaaattaaggtgtggaagatccagagcggccagtgtctgcgc
aggttcgagcgcgcccacagcaagggcgtcacctgcctcagcttctgcaaggacagcagt
cagctcctgagcgcctccttcgaccagaccatcaggatccacgggctgaaatcgggaaag
tcactgaaggagtttcgggggcactcctcgttcgtaaacgaagccgccttcacgccggat
ggacactacgtcgtcagcgcgtcttctgacggcactgtcaaggtttggaacgtgaagact
acagagtgcagcaacacattcaagtcccttggcacctcagctggcacggacatcaccgtc
aacaatgtgatcctcctgcccaagaaccccgagcattttgtggtttgcaaccgatccaac
actgtggtcatcatgaacatgcaaggccagatcgtgagaagcttcagctccggtaagaga
gaggggggagactttgtgtgctgcaccctgtcgccccgcggagagtggatctactgcgtg
ggggaggatttcgtgctctactgcttcagcaccgtcaccggcaaactggagagaaccctg
acggtccacgagaaggacgtgattggcatcgcccaccaccctcaccagaacctgatcagc
acgtacagtgaggacggcctgctgaagctgtggaagccgtag

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