Conger conger (European conger): 133135258
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Entry
133135258 CDS
T10633
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ccog Conger conger (European conger)
Pathway
ccog04512
ECM-receptor interaction
ccog04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133135258 (frem1a)
04518 Integrin signaling
133135258 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccog04091
]
133135258 (frem1a)
Lectins [BR:
ccog04091
]
C-Type lectins
Lecticans
133135258 (frem1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
UL45
Motif
Other DBs
NCBI-GeneID:
133135258
NCBI-ProteinID:
XP_061108114
LinkDB
All DBs
Position
8
Genome browser
AA seq
2176 aa
AA seq
DB search
MGPLGLLLLLGVFHWTQASLVKVNAGLRVKRGQSAYLQEGDLQFDIPRVKDSCKVEVVLN
EPITQRVGTLTPQVFDCHFLTDEVKYVHNGCPILRRDTVMLRLYRFTDTDTYTEVFYLNV
KILEPDCNVIKLGPRILAVPEFYGLSDPLDGNVLSFHYEHRPNLECTVRVSTQETHLPAH
GQLVIGELEKLEPRGDEPESFIPIRQQLLNKARAKCKDEACRKGLKLVQTTKVPCEEFLV
MGLRYQHSDPPSPDIDYIAIRLDLTDTRSRTIYKSERAWIPVSIKHAVRNQQPRQAFMST
FILEVDQFILTPLTTATLDAEDSETPKPLLVFNISKPPREGFFTHLSDHTRPITSFTWMD
LNDMLIAYQPPNSSHTQRRNYEVDFQVHDFFFERSPPIMVHVSVRTADTNAPRVSWNMGI
SLLEGQSRPITWEQLQIVDNDNLKAVRLITVDGLQHGRLTVNGGKGFMFSVNDIKAGVVC
YHHDDSDTTKDYVVFRITDGRHQTRHKFPINILPKDDSPPFLITNMVLELSEGQTALLRG
SILQASDMDSSDDYILFNITRPPQAGELMKIPAPGLTGYPVSRFLQKDLFHSVMFYRHLG
NEVFDDSFEVVLSDFHDPPNLSEPQVIVVHIIPVHDQLPREAPGVTRHLVVKETEVIHLT
KKQLHFIDPESPDSELTYTVTTPPFYSSNYGRNDAGRLFLVDTIPKLTKDANAPVLRLFT
QHAVNYMKVAYMPPILDIGPYPQHIELVLSVSNQQGSTITGICFNITVLPVDNQAPEVYT
NQLTVEEGGDCLLGLEHLLLTDQDSMEDALRVELKREPHHGYVELDGFPMKSGQVFTVKD
LKSLKVRYHHDSTETVQDDIVFIATDGINAVDFVLQVKVILVNDEIPVMMPGLKPMLDCA
EGQEVVITIEYLYATDNDSDDSRLFYMIARQPYHGVVCKNGFVVDRFIQADITAGIITYK
HTGGEIGRSPRHDIITFVISDGETETLPSCCPNEGPSSPRHTNRLQQTLPVYDLNITIFP
VNSQPPSIAIRDVFVVDEGGSAAITVAHLRTSDMDTPLEELELILVSPPQFGYIENILPS
PGFEKSNMGISIGTFSYKDVMNGHINYVQSRHQRIEPTKDQFMVCVSDGKHRSADTPFYI
IISPINDEIPEFLARNITVREGDMKELDPTVLNAVDLDVPHNDLVFSVVQQPQHGMIMGR
LYGNDITRYKRLVRRGHASEVAVQDFTLEELKNGMTVMYMHDDSESMQDGFTIELSDGKH
RLQKHVTVNVVPVNDEAPRLIRNYGIEVEMGESRLISSAVLSAEDGDTPAQHVLYVFESV
PTDGLLQIKVDSDWVPLSVGMNCSQEAVDMNLLRYLHTGSAGSQGEDFFVFHLQDGSNRC
SAQHFYITVKDMEKGEIAVFVKPVKASRGERLVLTTDALLAVDRTDKPEELLYTITAPPS
HGHIEYIKHPGVPINTFSQMDVAANLVCYVHDNRGTSPRETIRFVVNNGQFTRNGTLEIA
VEMTDRVLPSLSRNGGLRVFQGSTMALSSDDLSLYDPDTPPASLFFLLAQPPQYGQLLLK
GAPLTGGNFTQQHLLDLDLAYRHAGGPSQIDRFSFTASDGTNQGFLVEGRIQAEPVIFSI
QMEAPDSPTPRVVQLQSVWKVELLKDGRYGMFVSSRELKAQDTDNSDEEITFHILRPPYF
GYLENATTGQFVNQRFTQKDLNRRTILYIISSALEALSDSVEFQVSDPQGNAGSAHTLEF
AWSRVELAQTEITACEDQGTLSLTVLRKGNTAESSYVSVKVKEVTATAGKDFTLSPSTLI
QFDPGVTSRSWRIRITQDQLEEAEEMFEVALTSPVSTVLGSVTKARVKIVDAKKGHCGSS
TVLEGPRLIGQLVPQGTPPRHGAIQVESLPLTQQDSGGWTRGDGVAPFEPPASKKRLRTN
GNGMTVRPSSVHKNGSDLVFTYHGIMSLRVEDDSSPSRKGRKAKVLVTSRGKQTPASVSP
GKKAVPAPDISVPRLTAQGPAGGSSPKACAPELTGLLHFNQSSSQLLRCDGMSWRPWALT
DEMVGAQKCPAGWTYHGGCCYFLATEQKATWSMATRACRENHNGNLVSILSKTDMDWLWD
FSGRKPFWIGLNDRENKGRWEWVGGEPVTYTNWRKSPPRVKRKGAKNCVLVRRRAKWQMQ
DCKKGKRQRYMCYLKT
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgggcccactggggctgctgctacttctgggggtcttccactggactcaggcttctctg
gtgaaggtcaacgcgggactgagggtgaagaggggccagtcggcctacctgcaggaggga
gacctgcagttcgacatcccccgggtgaaagacagctgcaaggtggaggtcgtcctcaac
gagccaatcacgcagcgggtgggaaccctgacccctcaggtgtttgactgccacttcctg
actgatgaagtaaaatatgtccataatggttgcccaattctacggagggatacggtcatg
cttcgactgtacaggttcacggacacagacacatacacagaggtcttctacctgaatgtg
aagattctggagcctgactgcaatgtcatcaagctggggcccaggattctggcggtgccc
gagttctacggactgtcagacccccttgatgggaacgtgctgtccttccactatgagcac
aggcccaatttggagtgcactgtccgagtgtccactcaggaaacacacctccctgcccac
gggcaactggtcatcggggagcttgagaagctggagcccagaggagatgaacctgagagc
tttattcccattcgccagcaattactgaacaaggccagggcaaagtgtaaagatgaggct
tgtcggaagggactgaagcttgtgcaaaccacgaaggtgccctgtgaggaatttctggtg
atgggcctgaggtatcagcacagtgatcccccctcgcctgatattgattacatcgccata
agactggacctcactgacacaaggagcaggaccatatacaagtctgagcgagcctggatt
ccagtgtcaatcaagcacgccgtccgaaaccagcagcccaggcaggctttcatgtccacg
ttcatcttggaggtggaccagttcatcctcacgcccctcacaacagcaacccttgacgct
gaggacagcgagacacccaaacccctgttggtgttcaacatcagcaagccccctcgggag
ggcttcttcacgcacctgtctgaccacaccaggcccatcacatctttcacctggatggac
ctgaatgacatgctcatcgcctaccagccgcccaactccagccacacccagcgtaggaat
tatgaggtggattttcaagtccatgacttcttctttgaaagaagccccccaatcatggtc
catgtgtcagtcaggacagcagacaccaacgcacccagggtatcatggaacatgggcatc
agtcttctggagggtcaatctcgtcccatcacgtgggagcagctgcagattgtagacaat
gacaacctgaaggcagtgcgccttatcacagttgatgggcttcagcatgggagactaaca
gtaaacggtgggaaaggcttcatgttcagtgtgaatgatatcaaggcaggtgtggtgtgc
tatcaccatgatgacagcgacaccaccaaagactatgtggtcttcaggatcacagacggg
cgccaccaaacccggcacaagttccccatcaacatccttcccaaagatgacagtccaccc
ttcctgatcaccaacatggtgctggagctgtcagaggggcagaccgccctcctgaggggg
tccatcctgcaggcctctgacatggactccagcgatgactacatcctgtttaacatcaca
cgtccaccccaagctggagaactcatgaagataccagcacccggactcacaggatatcca
gtcagccgattcctacagaaagacctcttccactcagttatgttttaccgccatctgggg
aacgaggtgtttgacgattcttttgaagttgtgctctcagacttccatgatccacccaac
ctttcggagcctcaggtcattgttgtccacataatccctgtgcatgatcaactgccgagg
gaggcaccaggggtaactcggcatctggtagtcaaggagacagaggtgatccatctaact
aagaagcagcttcattttatcgatccagagtccccagacagtgagctcacttacaccgtc
accacaccccccttctatagcagcaattatgggagaaatgatgcagggaggttattcctg
gttgacaccattcccaaattaaccaaggatgccaacgcaccagtgctgaggctatttaca
cagcatgctgtgaattacatgaaggtggcctacatgccccccattctggatataggacct
tacccccagcacatcgagcttgtgctgtctgtctccaaccagcaaggcagcaccatcaca
gggatttgcttcaacattacagtgctgcctgtggacaaccaggccccagaggtttacact
aaccaactgacagtggaggaggggggagactgtctattggggttggagcacctgctcctc
acagaccaggactctatggaagatgcactgcgggtagagctaaagagggagccacatcat
ggatatgttgagctggatggcttccccatgaaatcaggacaggtcttcactgtgaaggat
ctgaaaagcctaaaagttaggtatcaccatgacagcactgaaactgtgcaggatgacatt
gttttcattgccacagatggaatcaatgcagtggactttgttttgcaagtgaaggtgata
ctggtcaatgatgagatccccgtcatgatgccgggtttgaaacccatgcttgactgtgct
gaaggccaagaggtggtcatcaccatagagtacctctatgccactgacaacgacagtgac
gacagcaggctcttctacatgattgctcggcagccttatcacggagtagtgtgtaaaaat
ggctttgtggtggatcggttcatacaggcagacataaccgcagggattatcacttataag
cacacagggggggagattggaagatctcctcgtcatgacatcatcacgtttgttatttcg
gatggagaaacagagaccctcccatcttgctgccctaatgaaggaccctcatcccccagg
cacaccaaccggctccagcagaccctccccgtctatgacctcaacatcaccatcttcccg
gtcaacagccagcctccctccattgccattagagacgtgtttgtggtggatgaagggggt
tctgctgccatcactgtggcccacctcaggacctctgacatggacacacctctggaggag
ctagagttgattctggtctctcctccacagtttggatacattgagaacatcttgcccagc
cctgggtttgagaaaagcaacatgggaatcagcatagggaccttctcctataaagatgtg
atgaatgggcatattaactatgtgcaatctagacaccagagaattgaacccactaaggac
cagttcatggtctgtgtgtctgatggcaagcaccgctctgcggatacacccttctacatc
atcatcagccccatcaacgatgaaattccagagttccttgccagaaacattactgtgcgt
gaaggagacatgaaggagctggaccctactgtactgaacgcagtggacctggacgttcct
cacaatgacctggtgttcagcgtggtccagcagccgcagcacggcatgatcatgggaagg
ctctacgggaacgacatcacacgctacaagaggctcgtccgccgaggacacgcctcagag
gtggcggtgcaggacttcacgctggaggagctgaagaatggaatgactgtgatgtacatg
cacgatgattcagagagcatgcaggatggtttcaccatcgaactgtccgacggaaaacac
cggcttcaaaaacacgtcacggtcaatgttgtgccagtcaatgatgaggctcctcgtttg
atcaggaactatgggatagaggtagaaatgggagagtcccggctgatctccagtgctgtc
ctatctgcagaggacggagacacacctgctcagcatgtgctctatgtgtttgagagtgtt
cccactgatggactcctccagattaaggtagactcagactgggttcccctctcagtgggc
atgaactgttcccaggaggcagtggacatgaacctgctcagatacctccacactggatca
gcaggctcccagggagaagacttctttgtgttccacctgcaggatgggagcaaccggtgc
tctgctcagcacttctatattactgtgaaggacatggagaagggggagattgctgttttc
gtcaagccagtaaaggccagtcggggagagcgtttggtgttgaccacggacgcactgctg
gctgtggacaggaccgacaaaccagaggagctcctctacaccatcactgcccctccctcc
cacggccatattgaatacatcaaacaccccggtgtgcccattaacaccttcagccagatg
gatgtggctgccaatctggtgtgctacgtccatgacaacaggggcacatcccccagggag
acaatccggttcgttgtcaacaatggtcagttcacccgcaatggcaccctggagattgcc
gtggagatgacggacagggtgctgccgtcactgtcgcgtaacggcggtctgcgcgtgttc
cagggctccaccatggctctctcctccgatgaccttagtctgtatgaccccgacacccct
ccggccagcctcttcttccttctggctcagcccccgcagtacggccagctcctcctgaag
ggggcgccgctcactggggggaattttacccagcagcatcttctggacttggacttggcc
tatcggcatgcgggcggcccctcccagatcgaccgctttagcttcactgcctctgacggc
accaaccagggcttcctggtggaggggaggatccaggcagagcctgtcatcttctccatc
cagatggaggccccagacagccccactcccagggtggtgcagctgcagagcgtgtggaag
gtggagctgttaaaggacggacgatacggcatgttcgtctcctcccgggagctgaaggca
caggacactgacaacagcgatgaggagatcaccttccacatcctccgaccaccctacttt
ggctacctggagaatgccaccacaggccagtttgtgaatcagcgcttcacccagaaggac
ctgaacagaaggactattctctacatcatcagctcagcgctggaggccctatctgacagc
gtggagttccaggtctccgacccgcaaggcaatgctgggtccgctcacacgctggagttc
gcgtggtcccgcgtggagctggctcagaccgaaatcactgcgtgtgaggaccagggcacg
ctctcgctcaccgtcctgaggaagggaaacaccgcagagtcgtcctacgtttccgtcaag
gtaaaagaagttactgctactgctggaaaggatttcaccctcagcccatccactctgatc
cagtttgatcctggcgtgaccagcaggagctggaggatcaggatcacgcaggaccagctg
gaggaggccgaggagatgtttgaggtggccctcacctcccctgtcagtaccgtgttgggc
agtgtcaccaaagcacgggtgaaaatcgtagatgcaaagaaaggacattgtggcagtagc
acagtactagaagggcccagactgattggacagctggtgccccaggggaccccgcctcgt
cacggggccatccaggtggagtccctgcccctcacccagcaggactcaggaggctggaca
cgaggagacggcgtggccccgtttgaaccccccgcatccaagaagaggctcagaaccaat
gggaatggaatgacagtccgtccctcttctgttcataaaaatggatcagacttagtattc
acgtatcacgggatcatgtcactgcgagtggaggatgacagctctccttccaggaagggg
aggaaagccaaggtgctggtgaccagcagggggaagcaaactccagcatctgtttctcca
ggaaagaaagctgtaccagccccagacatcagcgtgccccggctcactgcacagggcccc
gctggaggttcttcacccaaagcctgcgcccctgagctaacggggcttctccacttcaac
cagagctccagccagctcctccgctgtgatggcatgtcctggaggccctgggcgctgact
gatgagatggtcggtgctcagaagtgcccggcggggtggacctatcacggaggctgctgc
tacttcctggccacggagcagaaggccacgtggagcatggccaccagagcgtgcagagag
aatcacaatggcaaccttgtcagcattctttcgaagacagacatggactggttgtgggac
ttcagtggcaggaagccattctggattggcctgaacgaccgggagaacaaggggcgctgg
gagtgggttggcggggagccggtcacctacaccaactggaggaagagcccccctcgggtg
aagaggaagggggcgaagaactgcgtcctcgtgcgaaggagggccaagtggcaaatgcag
gactgcaagaaggggaagagacagcgctatatgtgttacctcaagacatga
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