Conger conger (European conger): 133135352
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Entry
133135352 CDS
T10633
Symbol
rab11fip5b
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ccog Conger conger (European conger)
Pathway
ccog04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133135352 (rab11fip5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133135352 (rab11fip5b)
Membrane trafficking [BR:
ccog04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
133135352 (rab11fip5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
RNase_Y_N
DUF4635
End3
Motif
Other DBs
NCBI-GeneID:
133135352
NCBI-ProteinID:
XP_061108265
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All DBs
Position
8:21934915..21971103
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AA seq
1580 aa
AA seq
DB search
MSLINIEDDQRWVPTHVQVTVLRGRGLRAKGKHGTSDVYTVIQVGKEKFTTAVFEKTTAP
EWSEECAFELLPGVLEAGGRGAYPPGSSDLAFTVMHRALIGPDVFLGHVVLPLDKVFQDR
ICLRNEWYKLRSKSGRKEKERGELQVTVQFTRNNLTASMFDLSVKDKPRSAFGKLKDRMA
GKKRGDAESASAIVPGGYAILSGGGRRISGEEVTDDDDEGRRSKVKSFFLKGRLRRSSDV
QSSTSLASECSGASSPGGSLSPTAGVNMLVSDLSNSPSEDSNHPADSSHVQSVQVPPKPM
THKRAFSDEVSRITVALPRPRAVETLRAQNAPLSRSSLCINGIHVYGAEPLGPGPSTLPA
TLGLLQKCAPLSRSLQNLARRAEDPRRSPGTARRWSFDRDGKEEKVPPATAQAESSGQPS
EATMGTVATVTVKPDSASEGKKQKKNLFSHGRSETAGKGSDTPKAEQGQAPHLPEERYKG
WFSAKDSQNKPSQEVSPMVETSTDAPCHPSLCSPIHLLPCPSPASASPGSGHNANPFTPS
PATPPISPSNPFLTRLQCNPFYEELLADQAVKCSLPTPPRPSSSPLWLSTAAPSRPNAPA
TTLNAVPQKPFVPQRERPRGVSRQRSLPALLSRTSNSSPNPFTTRSLSESGCEWDESFEA
FATSRLKSPRGLSHRRNGGTKEWPVDGIAEETVVNESSVPSGKVPPLPPRWPVRTPVKEC
RSDSWLDRAQELAVKKEACLLSQTDAASMLHRKEGERKRNTPCSFQDLSEEKGKMTEPLM
KPSNSDPSSGHVRECPVKSFSRKSSALQQAGLTVSGCDLEGLSRNHRFQQGHTSVEQGPN
NETNLSSTPEFFALEVPEVLDEVGFTSNTFIEVEDKLPSLLSEIYRNKSETDETDSTATV
PTHRVCTANQKSHVTSANILEPVPNITTVHPSTTSTKMMDSEVNMHIPNKNVCDSQLAST
NSALSCDARIDNVFEINNNTDKDFGLSLSVPRLLPDKVHLNKCHSLTSNTFRNPATMVSV
DYGDAISCMPISPGPNVGSTFGITRNAAEVLDMESDFNISTEPVEASSSEVRHPLGTSVE
ASIYGHFSSLTGAQTNNTHFGNTDTGNANIRVIGKECSQTELPPGDQKTVSVMPGKASAA
EVGLGNTFEQSPIVLDAQSGDSHLGNMFQGNLMEEHDNSNLKTSHKASANHLYCNSPLIS
HCLETNELRTVREQGALISCSPAEDKTIGETTENEHVLHPVKNTSEVSMFSNTEAKDGPL
FKATCSQNVPSLIGLLQQDECDKQEGSEPPAKPPRLYESTAVGQHVNEESKESQEPVHCR
KYGYVEPVVLEYPLSKNTQKISFEDLHAKVAPSSRSQTQPRLPLHGSAPWASSAPYPAAK
SNAQSALLPLPVLIPPTVRPTAGTAQATATPSSTAPRVIGSAHTVLPKETCRATSSLSHQ
ESSPHPVKPLTTSALQGEKKPEGRSVLVSGLEKFKSTMKPGRVSQTVEPEDDSTKSLSER
AAQYDHLTNNEIIALLLQREAELEKKGAEMAKQGALLEKREVEIKKMKVQVRDLEDYIDR
LLVRIMEQTPTILQVRSRYK
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgataaatattgaagatgatcagagatgggtgcctacgcacgtccaggtaacc
gtcctgcggggcaggggactgcgggcaaagggtaagcatggaaccagcgacgtttacacc
gttattcaagtggggaaagagaaatttaccacggctgtgtttgaaaagactactgctccg
gagtggtcggaagaatgcgccttcgagctgttacccggagtacttgaagctgggggacgg
ggcgcctatcctcccgggagtagcgacctggcctttacagtgatgcatcgagccttgatc
ggacctgatgtatttctaggacatgtcgtcttgcccttggataaagtcttccaagacagg
atatgtctgaggaacgaatggtataagctgcggtccaagtcagggagaaaggagaaggag
cggggggagctccaggtaacggtccagttcacccggaacaacctgactgccagtatgttt
gacctctccgtcaaagacaagccgcggtctgccttcggcaagctcaaggaccgcatggcg
ggcaagaagcggggggacgccgagtcagcctccgccatcgtgccgggaggctacgccatc
ctgtcgggcggggggaggcgcatctcgggggaggaggtcacggacgatgacgacgagggt
cggaggagtaaggtgaagagcttcttcctgaagggcaggctgcggcggtcgtcggacgtg
cagtccagcacttcgctggcctcggagtgcagtggggcctcgtctccaggagggagcctc
agccccactgctggggtcaacatgctggtgtcggacctctccaactcccccagcgaggac
agcaaccacccagccgacagcagccacgtgcaatctgtccaggttcccccaaagccgatg
acccacaagagggcgttcagcgacgaggtgagcaggatcaccgtggccctgcccaggccc
cgcgccgtggagacgctccgggcgcagaacgcgcccctctcccgctcctctctctgcatc
aacggcatccatgtgtacggggccgaaccgctggggcccggccccagcaccctgcccgcc
actctggggctgctccaaaagtgtgccccgctctcacgctccctccagaacctcgcccgc
cgggccgaagacccccgcaggagccctggtaccgcacgccgctggtctttcgaccgggac
gggaaggaggagaaggtgccccccgccacggctcaagccgagtcctctggccagccgtcg
gaggccaccatggggactgtcgccaccgtgacagtgaagccggattcagccagtgagggc
aagaagcagaagaagaatcttttctcccatgggaggagtgagacagcagggaagggctct
gacacgcccaaggcagagcaggggcaggctccgcaccttcctgaggagagatataaggga
tggttcagtgccaaggattcacagaacaagccgagccaggaagtgtctcctatggtagaa
accagcacagatgcaccctgtcacccttcactttgctcccctattcacttgctgccttgc
ccctcccctgcttctgcttcaccaggcagcgggcataatgctaatcccttcaccccctcc
cctgcaaccccacccatatccccctccaaccccttcctcacccgtctgcagtgcaacccc
ttctatgaggagctcctagctgaccaggcagtaaaatgttccctacctactccaccccgc
ccctccagctctcccctctggctctccacagccgccccttccaggcccaatgcccctgct
acaaccctcaacgcagtgcctcagaaaccatttgttccacaaagggagcggcccaggggt
gtatcccgacagagatctcttcctgccttactctccagaacatctaactcctcccccaac
cccttcaccacacgctccctgtctgagagcggctgcgagtgggacgagtcgttcgaagcc
tttgcgacaagcaggctgaagtcaccgcgaggcctcagtcacagaagaaatggcgggacc
aaggagtggcctgtggatgggattgcagaggagactgtggtcaatgagtcatcggtccca
tctgggaaagtcccgccccttcccccacgctggcctgtgaggactccggtgaaagagtgc
cgcagtgacagctggttggacagggcccaggagctagcagtgaagaaggaggcatgtctg
ctgtctcagacagacgcggcctccatgctacaccgcaaggagggggaacgcaagagaaac
accccttgctcattccaggacctttcagaggagaaaggcaaaatgacggaaccactcatg
aaaccctccaactctgatccatcgtcagggcatgtgcgtgaatgtccagtgaagagtttc
tctcgcaagtcctcagctttgcaacaagctggtctaacagtatcaggctgtgaccttgag
ggcctgtcaaggaaccacaggtttcaacaaggacacacttctgtggaacaagggcccaac
aatgaaacaaacctaagcagcacacctgagttctttgccttagaagtgcctgaagtatta
gatgaagtaggtttcacaagcaatactttcatagaagtggaagacaagcttccttcactt
ttgtcagaaatataccgtaataaatcagagactgatgagactgattccactgccactgtt
ccaacacacagagtgtgtacagctaatcagaagtcccatgtcacttctgctaatatactt
gagcctgttcctaatattaccactgtccacccaagcactactagcaccaaaatgatggat
tcagaagtgaacatgcatatccccaataaaaatgtttgtgattcacagcttgctagtact
aactctgctctttcttgcgatgccaggattgataatgtctttgagataaacaacaacaca
gacaaagattttggcctgtctctatctgttcccagactcctccctgacaaagtgcacctg
aataaatgccacagtttgacatcaaacaccttccgaaatcctgctaccatggtgtcagtg
gattatggtgatgcaattagctgcatgcccatttctcctggtccaaatgtgggatcgaca
tttgggattaccagaaatgctgctgaagttttggacatggaatcagatttcaatatttct
acagaaccagtggaagcttcttcatctgaggtcaggcatccccttgggacttctgtggaa
gcaagtatttatggacatttctcatctctgactggagcacaaacaaacaacactcacttt
ggaaacacagacacagggaatgctaacataagggtcattggcaaagaatgctcgcagaca
gaattgccacctggagaccaaaagacggtttcagtgatgcccggaaaggcctcggctgca
gaagtgggcctaggtaatacctttgaacagtctccaattgttttagatgctcagtctggt
gactcacatcttggcaacatgtttcaaggaaatcttatggaagaacatgataactcaaac
ttgaagacatcacacaaagcttctgcaaatcacctttactgcaacagcccgttgataagc
cattgtctagaaacaaatgagctgagaactgttcgtgaacaaggagcacttatctcctgt
tctcctgctgaagataaaaccattggggaaaccactgagaatgaacatgttcttcatcct
gtgaaaaacaccagtgaagtttcgatgttttcgaacacagaggcaaaggatgggcctttg
ttcaaggctacatgctcccagaatgttccttctctcattggactattacagcaggatgaa
tgtgacaagcaggaaggtagtgagccaccggccaaaccccccagactttacgagtccaca
gcagtaggtcaacatgtgaatgaggaatctaaagaaagccaggagcctgtacattgcagg
aagtatgggtatgtagagcctgttgtgttggaataccctctctctaaaaacacgcagaag
atcagctttgaggatcttcatgccaaagtggctccaagctccagaagtcagacgcaaccc
aggctcccactgcatggctctgcaccttgggcttcttccgccccatacccagcagctaaa
tctaatgctcagtctgccctcttacccctgcccgtcctaatcccccccactgtgaggcca
acagcagggaccgcccaggccactgctaccccctcctccactgctccacgtgtgattggc
tcagcgcacacagttctgcccaaggagacatgccgggctacaagctccctgtcccaccaa
gagagcagcccccacccagtgaagccactgaccacttcagccctccagggagaaaagaag
ccagagggccgctcagtactggtcagtggtttggagaagttcaagtccaccatgaaacca
gggcgagtatcccagacagtcgagcctgaggatgacagtactaagtctctttcagagaga
gcagcccagtatgaccacctaaccaataacgaaatcattgccctgttactgcaacgagag
gcagagctggagaagaagggggcagagatggcgaagcagggggcgttgctggagaagagg
gaagtagagataaagaagatgaaggtacaggtgcgggatctggaggactacatcgaccgg
ctgttggtgcgcatcatggagcagacacccacaattctgcaggtgcgctccagatataag
tga
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