Conger conger (European conger): 133136389
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Entry
133136389 CDS
T10633
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133136389 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133136389 (exosc7)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133136389 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
133136389 (exosc7)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
133136389
NCBI-ProteinID:
XP_061109825
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Position
9:complement(19793541..19798948)
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AA seq
291 aa
AA seq
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MATVQVSEAEKVYIMHGVRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAILV
GIKAEIGKPKPMVPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNRNSID
LRALCISPGEHCWVLYVDVLLLQCDGNLFDAISVAVKAALFNTRISKVHISEDEEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLLEKACSVASLLISVTHRGTITCVR
KVGGGSLDPESIFQMMETGKRVGKALHAPLMEVLQKEESLGDKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtacaagtgagtgaagcagagaaagtgtacataatgcatggcgttcgggat
gatctacgagttgatggaaggggatgcgaggactacagacacatggaaatcgaaaccgac
gtggtgtcgaatacagatgggtctgcaaaagtgacactggggcacacagctatccttgtg
ggcataaaggcagagatcggaaagcccaagccaatggtgccagatgaaggctatctggag
ttttttgttgattgttctgcaaatgctactccagagtttgagggccgtggtggggaggag
ctggggactgaactcagcaacactctgtacaaagtgttcaacaacagaaacagcattgac
ctgcgagcactctgcataagccctggagaacactgctgggtgctgtatgttgatgtactg
ttacttcagtgtgatggaaacctgtttgatgccatctctgtggcagttaaggcagcactc
ttcaatacaagaatctccaaagtgcacatctcggaggacgaggaaggaggcaaagagatc
gagctgtcagacgacccctacgactgcatgaggctgaatgtggaaaatgtgccctgcatc
gtgactctgtgcaaggtgggtcacaggcacgtggtggatgcgactctgctggagaaggct
tgctcagtggccagcctcttgatctcagtcacacaccgggggacgatcacctgcgtcagg
aaggtgggaggggggagcctggacccagagagcattttccagatgatggagacagggaag
cgggtgggcaaggcactgcacgcccctctcatggaggtcctgcagaaggaggaaagtcta
ggcgataagagacagaaagtgggcttccttggatga
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