Conger conger (European conger): 133136448
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Entry
133136448 CDS
T10633
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccog00535
]
133136448
Proteoglycans [BR:
ccog00535
]
Extracellular matrix (ECM) proteoglycans
Others
133136448
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_Dep-1_2nd
VWA_3
DUF4998
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
133136448
NCBI-ProteinID:
XP_061109913
LinkDB
All DBs
Position
9:complement(16811262..16892512)
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AA seq
1871 aa
AA seq
DB search
MQFSGLFPVFLVTLATIFNNPAQGQVSSPRRLRFKVLGSDKLHVSWKEPRGDFESYRFIY
NTEPGGKEQELQVSKGENKAEIENFNPGKEYSIKVIAVSGTQNSKPLEGKYTAQAAVPDD
DTASAPLQKLKDTSEDTNEISEADLFICKTPAIADIVILVDGSWSIGRINFRLVRTFLEN
LVSAFNVGFDSTRIGLAQYSGDPRIEWHLNAHTTKEAVIEAVKNLPYKGGNTLTGLALMY
IQENCFRAESGSRDGVPKIGILITDGKSQDDVIPPAQSLREAGIELFAIGVKNADENELR
AIASPPEDTHVYNVADFSIMSSIVEGLTRTLCERVEQQDKEIKGVSGALTSPSAPTDLVT
SEVTARSFRVSWTQAPGEVLKYRVVFYPTRGGQPDEVVVSGSEHSVVLPYLNSLTEYQIA
VFAVYISAASEALRGIETTLALPMVNDLELYDVSHSTMRARWKGVEGASGYMILYAPLTE
ADAADEKEVKVAETVNDVELQGLTPDTEYTVTVYAMYGEEASDPVTSQETTLPLTPPRNL
RFSNVDHSSAQLTWDAASRKVRGYRIMYVKTDGEQPKEIEVGQVTTLHLRNLTSLTEYTA
AIFALYAEGQAEPLTDSFTTKMVPEPLDLRTSEVSTESFRVSWRHPASDVVLYRVSWTPM
TGGDTKEMLVNGKLNTFLLTNLRPLTEYEVSLSAIFRDETESDAVAVLETTVERTTTLAT
TTTAPAVVRVGVRNMQISDQTTFSMQVSWELQDPKVRQYRVTYISARGDRAEETVLVPSP
KNSLLLQPLLSDTEYKVTVTPISTNGEGLSTSRMGRTLPLSAPRNLRVSEEWYNRFRITW
DTPPSPTMGYRIVYQPISAPGPALETFVGEDVNTMLILNLLSGTEYSVKVIASYTTGSSE
ALSGKAKTLYLGVTNLNTYQVRMTSMCGQWQPHRHATVYRVVIESLLNGQKQEANLGGGA
SRHCFYNLSPNTQYKISVYAQLQETEGPAVVIMDKTFPVPTEPPTAPPTTTPLPTIPQPR
EVCKAAKADLVFLVDGSWSIGDENFHKIIRFLYSTTGALDQIGPDGTQVAIAQFSDDART
EFRLNSYNDKETLLEAIQRIQYKGGNTKTGRAIKHVKDFIFTVEGGMRRGIPKVLVVLTD
GRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASRPSERHVFFVDDLDAFRKIEE
QLVTFVCEAASATCPSVQMSGSTLAGFRMMEMFGLVGGQYASVEGVSMEPGTFNSFPSYR
LHKDALISQPTKYLHPEGLPSDYTITVLFRLLPETPQEPFALWEVLNKDNEPLVGLILDN
SGKTLTFFNYDYKSEFQTVTFEGPEIKKLFHGSFHKLHMAISKTSARAVIDCKMVGEKPI
NAAGNITMDGLEVLGRMVRSRGKKENSAPFQLQMFDIVCSTSWASRDKCCELPSLRVEAD
CPAMPKACTCTQDSKGPPGPSGIPGGPGIRGARGDRGEPGHVGPQGPAGDIGAPGPQGSP
GPQGPSGLSIQGPPGGPGEKGDKGETGPAGLQGVPGPGGSPGRDGPAGQRGLPGKDGPQG
RQGPSGTIGSPGAPGSPGLTGPPGSLGNPGPPGPPGTRGDKGERGDTQSQSTVQEIARQV
CEQLIQSHLSRYNSILTHVPVRQAVVRSAPGPPGEPGRQGPAGPQGEQGPSGRPGFPGSN
GENGQPGERGFPGEKGEKGSPGVGIQGPRGPSGPPGPPGEGRTGNQGQPGRPGNSGTPGR
PGIPGPTGPAGSPGYCDQSSCMGFNVGGGNGGGSTDQDVPLVQSPQNPYQPYNPAENEDE
EEDPYDPYRVYPPEYYQPNYPAPRPVQPDDGSVELRSPGIHRVSRSLSTKRRGSAQKREG
RRNKRTSGTLD
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgcagttttcgggactcttcccagtcttcttggtcactctggccaccattttcaacaac
ccagctcagggtcaagtttcatctccacggcgactacgttttaaagtgctgggttcagac
aaattgcatgtgtcttggaaggagccaagaggagattttgaaagctatagatttatttat
aacactgaaccaggtggaaaagaacaggagctgcaggtttcaaaaggagaaaataaagcg
gagattgaaaacttcaatcctgggaaggagtacagcataaaggtcattgctgtgagtgga
acacagaacagtaagccactggaaggcaaatatacagcccaggcagctgttccagatgat
gacactgcgagtgctcctcttcagaagctgaaggataccagcgaggacaccaatgagatt
tcagaagcggatctgtttatctgcaagactccggcgatagcggacatcgtgatcctggtg
gacggatcctggagcatcggcaggataaatttccgtctggtccgcacatttctggaaaac
ctggtgagcgctttcaacgtgggtttcgacagcacccggatagggctggctcagtatagt
ggggatcccagaatcgagtggcacctgaacgcccacaccaccaaggaagcagtgatcgag
gcggtgaagaacctgccatacaaaggaggaaacacacttacaggccttgcactgatgtat
attcaggagaactgcttcagggctgagtctggatctcgagacggtgttcccaaaatcggg
attttgatcacggacggcaagtcccaggatgatgtcatccctccagcccaaagccttcgg
gaggcgggcatcgaactgtttgctattggcgtgaagaacgcagacgaaaacgagctgagg
gccatcgcctcgccgcccgaagacacgcacgtctacaacgtggccgacttcagcatcatg
agctccatcgtggagggcctgacccggacactgtgtgagcgcgtcgagcagcaggacaag
gagatcaaaggagtgtcgggcgctctgacatcgcctagcgcacccacggacctggtgaca
tcagaggtgacggcgaggagcttccgtgtgtcctggacccaggcccccggagaggtgctg
aagtaccgggttgtgttctacccgacccgagggggccagccggatgaggtggttgtgagc
gggagcgagcactctgtggtcctgccgtacctgaactctctgacggagtatcagatcgcc
gtgttcgccgtgtacatcagcgcggccagcgaggcgctgagaggcatcgagactaccttg
gccctgcccatggtgaacgacctagagctgtacgacgtgtcccacagcaccatgcgtgct
cgctggaagggcgtggagggggcctcggggtacatgatcctgtatgccccgctcacagag
gccgacgctgctgacgagaaggaggtgaaagtagcagaaactgtgaacgatgtggagctg
caggggctgacgccagacacagagtacacggtgaccgtgtacgccatgtacggagaggaa
gccagcgatcccgtaaccagtcaggagaccacacttccgctgactccgccacgcaacctg
cgcttttccaatgtggaccacagctctgcccagctgacctgggacgctgcctccaggaag
gtcagaggttaccgcatcatgtatgtcaaaactgatggggaacaaccaaaagagattgag
gtgggtcaggtcacgaccctccatcttaggaacctgacatctctgactgagtacacggca
gccatctttgctctctatgcagagggccaggctgagcccctcactgacagcttcaccacc
aagatggttccagaacctctggaccttaggaccagcgaggtctccacggagagcttccgg
gtcagttggaggcacccagcctcggacgtggtgctgtacagagtatcctggacccccatg
accgggggtgacactaaggagatgcttgtgaatggaaaactcaacaccttcctgttgacc
aatttaagaccactcactgagtacgaagtgtcactctccgccatcttcagagacgaaact
gagagcgatgctgtggctgttctggaaactacagtggaaagaacaacgactttggccacc
actactacagctcctgcagtggtgcgagtgggagtgaggaacatgcagatcagcgatcag
accaccttcagcatgcaggtatcctgggagctgcaggatccgaaggtgcgtcagtaccga
gtgacttacatcagcgctaggggtgaccgcgcggaggaaacggtcctggtgcccagcccc
aagaacagcctcctcctgcagcccctgctctcagacacggagtacaaggtgaccgtcacg
cccatctccaccaacggggagggcctcagcacctcccgcatgggcagaaccttgcccctc
tctgctccccgaaatctgagggtgtctgaggaatggtacaaccgtttccgtataacctgg
gacacccccccatcaccaaccatgggctacaggattgtctatcagccaatctccgcacca
ggacctgccctggagaccttcgtgggcgaagatgtcaacaccatgctgatcctgaacctg
ctgagtgggacggagtacagtgtcaaggtcatcgcctcctacaccacgggctccagcgag
gcgctgtccgggaaggccaagacactatacctgggagtgaccaacctgaacacataccag
gtgcgcatgacgagcatgtgtggccagtggcagcctcaccggcatgccaccgtctaccgc
gtggtcatcgagtctctgctcaatggacaaaaacaggaagcaaatcttggagggggagct
tcgagacattgcttctataacctgtcacccaacacccagtacaaaatcagcgtgtacgcc
cagcttcaggaaacagaaggaccagcagttgtcatcatggacaaaacatttcctgttcca
actgaacccccgactgcacccccgacgaccacccccctacccaccattcctcagccccgg
gaagtttgtaaagcagccaaggctgacctggtctttctggtggatggctcctggagcatc
ggcgatgagaacttccacaaaatcatccggttcctgtacagcacgacgggggccctggat
cagattggcccagatgggacccaggtggccatcgctcagttcagtgatgacgccagaaca
gagttcagactcaactcttacaatgacaaggagaccctgctggaggccatccaacgcata
cagtacaagggaggaaacaccaaaacaggacgagcaatcaaacatgtgaaagacttcatc
ttcaccgtggaggggggcatgaggaggggcatccccaaagtgctggtggtgctgacagat
ggccggtctcaagatgatgtcaataaggtttccaaggagatgcaaatggaaggctacatc
gtgtttgcgatcggattcgccgacgccgactacggggagttggtgagcatcgccagcagg
cccagtgagagacacgtgttcttcgtcgacgatttggacgccttcaggaagattgaggag
cagttggtgaccttcgtgtgtgaagctgcctcagcaacttgtccttctgtccagatgagt
ggaagcactttagcaggcttcaggatgatggagatgttcgggttggtcggtggccagtat
gcaagtgtagagggagtgtccatggagcccgggacattcaacagtttccccagctatcgg
ctacacaaggatgccctcatctcccagcccacaaagtacctgcaccctgaaggcctgcca
tcagactacaccatcaccgtgctgttccgcctgcttccagaaactcctcaagagccattt
gcattatgggaagtccttaacaaagacaacgaacccctggtgggccttatcctggacaat
agtgggaaaaccctcaccttcttcaactacgactacaagtcagagttccagacagtgacc
tttgaggggccagagatcaaaaagctcttccacggaagttttcacaagctccacatggcc
atcagcaagacctccgcccgggccgtgattgactgcaagatggtgggggagaagcccatc
aacgcggcaggcaacatcaccatggacgggctggaggtcttgggcaggatggtgcgctcc
cgggggaagaaggagaactcagcgccgtttcagctccagatgttcgacattgtctgcagc
acctcctgggctagccgagacaaatgctgtgagctgccaagcctgcgagtggaagctgac
tgccctgctatgcccaaagcatgcacctgcacccaggacagcaaaggcccacctggccct
tcaggaatcccaggtggcccaggaatcagaggtgcaagaggggaccgaggggaaccaggc
catgtgggaccccagggcccagcaggagacattggtgcaccaggaccccagggctcacct
ggcccccaggggcccagtggactgtccattcaggggccgccgggaggacctggggagaaa
ggggacaagggtgaaactggccctgccggactgcagggtgtccctggtcccggggggtca
ccaggccgagatggacctgcaggacagagggggctgccagggaaggatggccctcaggga
cggcaaggtccatcaggaaccattggctcccctggagctcccggatcaccagggttgacc
ggacccccggggtccctgggtaatccaggcccgccgggccctcctggtaccagaggcgac
aagggtgaacgaggtgacacacaatcccaatctaccgtccaagaaatcgcccgtcaagtc
tgtgaacagctgattcagagtcacttgtctcgctacaactccatcctcacccatgtccct
gttcggcaagccgtggtgcgctcagcccctgggcccccaggggagccggggcggcagggc
cctgcggggccacagggagagcaggggccatcaggccggccagggttccccgggagcaat
ggagagaacggccagccaggagagagagggttcccgggagagaagggggaaaaggggagt
cctggtgtgggcatccagggccccagaggcccttctgggcccccaggtccaccgggcgag
gggcgaacagggaaccaggggcaaccgggcaggccaggcaactcaggcactccaggccgg
cctggcatccctggccccaccggccctgcggggtcccctgggtactgcgaccagagctcc
tgcatgggtttcaacgtcggaggtggaaatggtggtggctcaactgatcaagatgttccc
ttagtacaatcgcctcaaaacccctaccaaccgtacaaccctgccgaaaacgaggatgag
gaggaagatccttatgacccttaccgcgtgtacccgcccgagtactaccagcccaactac
cccgccccccgccccgtccagccagacgatggcagtgtggagctgaggtcaccaggaatc
caccgtgtaagcagaagcctgtctacaaagaggagaggctctgcccaaaaaagggagggg
cgacgaaacaaacgcacatcagggacactcgactaa
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