Conger conger (European conger): 133136582
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Entry
133136582 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin-3a-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ccog Conger conger (European conger)
Pathway
ccog04145
Phagosome
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133136582
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133136582
09144 Cellular community - eukaryotes
04510 Focal adhesion
133136582
09142 Cell motility
04820 Cytoskeleton in muscle cells
133136582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133136582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133136582
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133136582
Membrane trafficking [BR:
ccog04131
]
Endocytosis
Phagocytosis
Opsonins
133136582
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133136582
Exosomal proteins of colorectal cancer cells
133136582
Exosomal proteins of bladder cancer cells
133136582
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133136582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_MSP1_1
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
133136582
NCBI-ProteinID:
XP_061110199
LinkDB
All DBs
Position
9:40917281..40948679
Genome browser
AA seq
951 aa
AA seq
DB search
MGAKTTMPLLFLVSASLLLCICDSSEMQVIDMLTLDAKQSVSAVEKVSGAMNTLSDIYIV
STFRLPPKLGGVLLGFYDKQDNKKYLELAIMGKISKALVRYVRSDGKLHTVSLQNVNLIE
GQSHSLILRVGGLRRDNLNLELYFNCRLADSSQGLPSLVQLPTDPESVDIRNGYKAYGRL
QGAVETLKIALGGSVAKAGVLTDCPFQGDSHNTLNGDVNSILGDHTKALIGQLIIFNQIL
GELRQDIREQVKEMSLIRNTILECQVCGFHEPRSRCMPSPCYHGVHCMETFDYPGYRCGP
CPEGLAGNGTHCRDIDECSLAMPCFSPAACVNVPQGFTCKPCPPGLTGHPLSGVGVEYAK
SHKQECMDVDECVEGACVPNSVCINTVGSYKCGQCKAGFYGNQTAGCFPWRSCDSLGFNP
CDVNAHCVIERNGEVTCRCNVGWAGNGNTCGPDTDIDGYPDQSLPCSIDNDKHCKPDNCM
NTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLIPNKDQQNSDTDSFGDSCDNCPN
VPNIDQQDTDGNGEGDACDNDIDGDGIPNVLDNCPKVPNPLQTDRDGDGVGDACDSCPEV
SNPMQTDIDNDLVGDLCDTNNDMDGDGLQDTRDNCPDVPNSSQLDSDNDGVGDECDDDDD
NDGIPDYVGPGPDNCRLIVNPNQKDSNGNGVGDVCEEDFDNDMVMDVVDVCPESAEVTLT
DFRAYQTIILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHIN
TVTDDDYVGFIFGYQDSSSFYVVMWKQTEQAYWQSIPFRAVAQPGLQLKAVKSRTGPGEF
LRNALWNTGDTPGEVKLLWKDPRNVGWRDKTSYRWQLLHRPQVGYIRVKLFEGPTLVADS
GVVFDTTMRGGRLGVFCFSQEAIIWSNLRYRCNDTVPEDFDRRKAMMDLKV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgaaaacgacgatgccactcttatttttggtctcagcttctctcctcttatgt
atctgtgactcgtcggagatgcaagtgattgacatgttgacgctggacgctaagcagagc
gtgtcggcggtggagaaggtgtcgggggccatgaacacgctcagcgacatctacatcgtc
tccaccttccgtctcccgcccaaactgggcggagtgctgctgggcttctacgacaagcag
gacaacaagaagtacctggagctggctatcatgggcaagatcagcaaggctctggtgcgg
tatgtacggagcgatgggaagctccacacagtcagcctgcagaacgtgaacctgatcgag
ggccaatcgcattcgctcatcctccgggtgggcggactccgcagggacaacctcaacctg
gagctctacttcaactgccgattggccgactccagccaaggcctcccctcattggtccag
ctcccaacggacccggagtctgttgacatccgcaacggctacaaagcctacggcaggtta
cagggtgctgtggaaactctgaagattgctcttggcggctcggtggctaaagcaggagtt
ctgactgactgtccgttccagggagactctcacaacacattgaatggtgatgtgaactcc
atactgggtgaccatacgaaggccctgattggccagctgatcatcttcaaccagatcctg
ggggagctgaggcaggacatcagagagcaggtgaaagagatgtctctgatcagaaacacc
atcctggagtgccaagtgtgtgggttccacgagccgcgctcacgctgcatgcccagcccc
tgctatcacggggtgcactgcatggagaccttcgactaccccgggtaccgctgcgggccc
tgtcccgagggcctggcggggaacggcacacactgccgggacatcgatgagtgctccctg
gccatgccctgtttctccccggctgcgtgtgtgaacgtgccccagggcttcacctgtaag
ccgtgccccccagggctcactggccaccccctcagcggggtgggagtggagtatgccaag
agtcacaaacaggagtgtatggacgtggacgagtgtgtcgagggcgcgtgtgtgcccaac
tccgtgtgcatcaacactgtgggctcgtacaagtgtggccagtgtaaggcgggtttctac
ggtaaccagacggcgggctgtttcccgtggcgatcctgcgattcgctgggcttcaacccc
tgcgacgtcaacgcgcactgcgtcatcgagcgcaacggcgaggtcacctgcaggtgtaat
gtgggttgggcaggtaacgggaacacctgtggacctgacactgatatcgatggataccca
gaccagtctctgccctgctccatcgacaacgacaagcactgcaagccggataactgcatg
aacacgcccaactcgggccaggaggacgccgataacgacggcattggggaccagtgtgac
gaagacgcggacggggacgggatcaagaacgtggaggacaactgccggctgattcccaac
aaggaccagcagaactcggacacggactccttcggagactcctgcgacaactgtcccaac
gttcccaacatcgaccagcaggacacggatggcaacggcgagggagacgcctgcgacaac
gacatcgacggagacggaattccaaacgttctggacaactgccccaaagtgcccaacccc
ctgcagactgaccgggacggggacggggtgggggacgcctgtgacagctgccccgaagtc
agcaaccccatgcagacagacattgataatgaccttgtgggtgacttgtgtgacaccaac
aacgacatggatggggatggtctccaggacactcgggacaactgccccgacgttcccaac
agctcccagctggactccgacaacgacggggtcggcgatgagtgtgacgacgacgacgac
aacgacgggatcccggactatgtcggccccggaccggacaactgccggctcatcgtcaac
cccaaccagaaggactccaacggaaacggcgtgggcgacgtgtgcgaggaggacttcgat
aacgatatggtgatggacgtggtggacgtgtgtccggagagcgctgaggtcacgctgacc
gacttcagggcctaccagaccatcatcctggacccggagggcgacgcccaaatcgatccc
aactgggtggtgctcaaccaggggatggagattgtgcagaccatgaacagtgaccctggc
ctggctgtaggctacacggccttcaacggggtggacttcgagggcacgttccacatcaac
acggtgacggacgacgactacgtgggcttcatcttcggctaccaagactcgtccagcttc
tacgtggtgatgtggaagcagacggagcaggcctactggcagtccatccccttccgggcc
gtggcccagcctggcctacagctcaaggcggtgaagtcgcggacgggccccggcgagttc
ctgcggaacgccctgtggaacacgggggacacgcccggcgaggtgaagctcctgtggaag
gaccccaggaacgtgggctggagggacaagacctcctaccgctggcagctcctccaccgg
ccccaggtgggctacatcagggtgaagctgttcgagggcccgacattggtcgccgactcg
ggggtggtgtttgacaccaccatgaggggcgggaggctgggcgtgttctgcttctcccag
gaggccatcatctggtccaacttgcgctatcgctgcaacgacaccgttcctgaagacttt
gaccgcaggaaggctatgatggacctgaaggtgtaa
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