Conger conger (European conger): 133137145
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Entry
133137145 CDS
T10633
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133137145 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
133137145 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133137145 (thoc1)
03041 Spliceosome [BR:
ccog03041
]
133137145 (thoc1)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133137145 (thoc1)
Spliceosome [BR:
ccog03041
]
Complex C
Other components
EJC/TREX
133137145 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133137145 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
133137145
NCBI-ProteinID:
XP_061111196
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All DBs
Position
9:29418054..29426169
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AA seq
652 aa
AA seq
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MSPSMFHFNDAKDKFTAATRGALDGKTSKPLITVFNQLPGNETEKKTTLDQSLRGVLEEE
IVKQKASCDDFLSLIYLSIDGVTEGICSATTPFLLLGDVLDCLPLDQCDKIFTFVEENVS
TWKSNSFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNITVFNKNEQESTLGQKHTEEKEEGMEEGEMGDEDEPAPCTIPIDYNLYRKFWTLQD
YFRNPVQCYDKFSWMTFLKFSDETLAVFKSYKLDDTQASKRKLEELRTAGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCALNDDQCLWMEDTTKLVYQ
LLRETPPDGDKFAAMVEHILNTEENWNSWKNEGCPSFVKERPADAKPIRPTRKRQAPEDF
LGKGPDRKIFMGNDELTRLWNLNPDNMEACKSDSREFMPTLEEFFEEAIEQADPANMVED
EYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLESMVIKLAKELPKDLPSEEI
KTGEEDDDDNGDNLLKESNDSPGIQNKLVSNQQMDEIAAKLGAQWKTLAGQLEMKAVEVR
EIETDSEDVDMQAKLLLVAWQDREGSQATVENLVSALNTAGFPKIAEILTET
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtccatgttccatttcaatgatgccaaagacaaatttacagctgcaacgaga
ggcgccctggacggcaaaacaagcaaaccccttataactgtatttaaccagctccctgga
aatgagactgaaaagaaaactacgcttgaccaatccctgcgaggagtcctggaggaggaa
attgtgaaacaaaaagccagttgcgatgatttcttgtctcttatttacctgagtatcgat
ggagtcactgaaggcatctgctctgccacgactcctttcctactcttgggagatgtgctg
gactgtctgccgctggaccagtgtgacaagatattcacctttgtggaggaaaatgtatct
acttggaaatctaactcattttattctgcggggaagaattatttgttaaggatgtgtaat
gatctcttgaggaggctctccaagtcccagaacacggtgttctgtgggcggatccagctg
tttctggcccgtctcttccccctgtcagagaagtcaggtttgaacctccagagccagttt
aacctggacaacatcacagtgttcaacaaaaatgaacaggagagcactctcggccagaag
cacactgaagagaaggaggaaggcatggaggagggggagatgggggacgaagacgagccg
gcaccctgtaccatccccatcgactacaacctgtacagaaagttctggacccttcaggat
tacttcaggaatcctgtccagtgctatgacaaattctcctggatgacgtttctcaagttc
tctgacgagacgttggcggtgttcaagagctacaagctggacgacacgcaggcctccaag
aggaagctggaggagctgaggactgcaggcggcgagcacgtctactttgccaagttcctc
accagcgagaagttgatggacctgcagcttagcgacagcaacttcaggcgccacatcctt
ctgcagtatttaatcctctttcagtatttgaagggacaagtcaagttcaaaagctccagt
tgcgctctgaatgatgaccagtgcctgtggatggaggacaccaccaaactggtctaccag
ctgcttagagagactccacctgatggggataagtttgctgccatggtagagcacatcctg
aatacagaagagaactggaactcctggaaaaatgagggatgccctagcttcgtgaaagaa
aggccagcggacgctaaaccgatacgacccaccaggaagaggcaggccccagaggacttt
ctgggcaaaggtcctgaccggaagatcttcatgggaaatgatgaactgacaagactttgg
aatctcaaccctgacaatatggaagcctgcaagtctgacagcagggagttcatgcccact
ctggaggagttttttgaggaggccatcgagcaggccgacccagcaaacatggttgaagac
gagtacaaggtggtgaggaactccaactatggttggagggcactccggctgctgtccagg
cgtagcccacacttcttccagccgaccaatcagcaatttaagagcctggcggactacctg
gagagcatggtcatcaaactggccaaagagctgccgaaggacctcccctccgaagagatc
aagacaggagaggaggatgatgatgataatggggataaccttctcaaagagagcaacgac
agccccgggatccagaacaagctggtgtccaaccagcagatggacgagattgcggccaag
ctgggcgcccagtggaagaccctggcgggacagctggagatgaaggcggtggaggtgcgg
gagatcgagacggacagcgaggacgtggacatgcaggccaagctgctgctggtggcctgg
caggaccgcgaggggagtcaggccaccgtggagaacctggtctccgcgctcaacaccgcc
ggcttccccaagatagcagagatcctcactgagacgtag
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