Conger conger (European conger): 133137479
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Entry
133137479 CDS
T10633
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133137479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133137479
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133137479
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133137479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
133137479
NCBI-ProteinID:
XP_061111764
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All DBs
Position
9:14962474..14979339
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AA seq
917 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQRE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKHFIEKHRYHI
RMLETILRMLDNDSVQVESIRKIKDDVEYYLDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPGHSHMEDEIFHHSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSSSSGASSSSLVSMATIAGGGGAITGGNSLLGSMGGLLP
NSGSYSTVTQQPQQSQQQNQQQHPPQAKHSPSNSNPSPSNLLLLPASTASSPPNTSTPGP
LATNSQPQGTSGPTSTSALGLGLGLGLGKGGVTGASSANQMSGLGLSGMPASLNTMAGLL
SSSTPAPYAQAAASGAVGSGLGGPIGGSAGSGSSSGVGGGNSSNGGGVSAGLLGSGSGVG
VGVGGGILGLGSGQTAIQGPPQMALSPVSGLAPGSAVGVIGGNGGGSGAGGGGGIGAGGG
SGALARPPSGQKQNGNTSYSAVVADSTPDSALSSASQSQSQPSSLGPTSNPPKDSGCSLL
SSMTLAPSSPSPSYSESKPAGGSLLNGPHSYSQASEGMKAPEPLSSLKSMAERAALGSGL
DGEMPSLHLADRDIFSGTTAPPGPPTAPQPSLSEVSIPPSLGVCPLGPVPLSKDQMYQQA
MQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQVPPPHSDSVEFYQRLSTETLFFIFY
YLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRK
KEGFTFEYRYLEDRDLQ
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaactacaaggtgaaatagatcgatgtttgaaaaaagtagcagag
ggtgtggaacagtttgaagacatttggcaaaagcttcataatgccgccaatgcaaaccag
aaggaaaaatatgaggcagacctcaaaaaagaaattaagaaattacagcgtcttcgagac
cagataaagacatgggtggcctccaatgagatcaaagacaaaaggcagctagttgagaat
cgcaaactcatagaaacgcaaatggagcggttcaaaatagtggagcgggagaccaagacc
aaggcttactctaaggaggggctgggcctggcacagaaggttgacccagctcaaagggaa
aaggaggaggtgggccagtggttgacgaatacgatagacacactaaacatgcaggtggac
cagtttgaaagtgaagtggagtctttgtctgtccaaactcggaaaaagaaaggcgacaaa
gagaaacaggaccggatagaggagctgaagcacttcattgaaaagcacaggtaccacatc
cgcatgctggagaccatcctgcgcatgctggacaacgactcggtgcaggtggagtcgatc
cgaaagatcaaggacgacgtggagtactacctcgactcttcacaggacccggactttgag
gagaacgagttcctgtacgacgatctggaccttgaggatatccctcaagccctggtggca
acgtctccgcctggccactctcacatggaggatgagatcttccaccactccagcagtacc
cccacctccaccacctcctcctccccaatacccccctcacctgccacttgcactacggag
aactcggaggatgataagaagagggggcgttctacagacagtgaagtcagtcagtcacct
gtaaagaatggaaatccctcctcttcgttatcttcctcatcctcctcgtcgtcctcctct
tcctcatcctcttctggagcctcttcatcctctctggtctccatggctaccattgcgggg
ggcggtggagccatcacagggggcaacagtctcttgggtagcatggggggcctcctccca
aactctggcagctacagcacggtgacccaacagccgcagcaatcgcagcagcagaaccag
cagcagcacccgccccaggcgaaacactctccctccaacagcaaccccagcccctccaac
ctcctcttgctgcccgcctccacagcctcttcgccccccaacaccagcacgcctggcccc
ctggccacaaactcccaacctcagggcacctcgggcccgacgtccacctccgccctgggg
ctggggctgggcctcggcctgggaaaaggcggggtgacgggggccagcagcgccaaccag
atgtcgggcctgggcctgtcggggatgccggcatccctcaacaccatggcggggctcctg
tcgagctccacgcccgcgccttacgcccaggcggcggcctcgggggccgtgggcagtggg
ctgggagggcccatcgggggcagcgctggcagcggcagctcgtcaggggtcggcggcggg
aacagcagcaacgggggcggggtgtcggcaggcctgctgggctccggcagcggggtgggt
gtgggggtcggcggggggattctgggactcggctccggacagacggccatccaggggccc
cctcagatggccctcagtcctgtcagcggattggctcctggcagcgccgtcggagttatc
gggggtaacggaggtggttcgggggcaggcggaggcggaggaattggtgcgggaggagga
agcggtgcactcgcaaggccccccagtggacaaaagcagaatggcaataccagttacagt
gctgtagttgcagacagtacaccagactctgccctcagtagtgccagccaatcacaaagc
caaccctcttccttaggacccacgtccaatccacctaaggacagcggctgcagcctcctg
agctcgatgactctggcccccagctcgccgtcgccgtcctacagcgagagcaagccggcg
ggcgggagcctgctgaacgggccgcactcctacagccaggcgtctgagggcatgaaggct
ccagagcccctcagctctctgaagtccatggcagagagagcagcccttggctcggggctg
gatggagagatgccatccctgcacctggcagacagagacatcttctccgggacgacggcc
ccaccggggcctcccacggcgccccagccctcgctgtctgaggtcagcatccccccgtcg
ctgggtgtgtgccccctcgggcctgtcccgctctccaaagaccagatgtaccagcaggcc
atgcaggagtcggcctggacgcacatgccccacccctccgactcggagaggatcaggcag
tacttgatgaggaacccgtgccccaccttgccttttcaccaccaggtgccccctcctcac
tctgactccgtggagttctaccagcggctatccacagagactctcttcttcattttctac
tatctggagggcaccaaggcacaatatctcgcggccaaggcactgaagaagcaatcatgg
cgattccacaccaagtacatgatgtggtttcagagacacgaggagcccaaaaccatcact
gatgagtttgaacaggggacatacatttactttgactatgagaagtggggccagaggaaa
aaggaaggattcacatttgagtacaggtaccttgaagaccgagacctccagtga
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