Conger conger (European conger): 133138796
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Entry
133138796 CDS
T10633
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccog01009
]
133138796 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133138796 (hdac6)
04131 Membrane trafficking [BR:
ccog04131
]
133138796 (hdac6)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133138796 (hdac6)
Enzymes [BR:
ccog01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
133138796 (hdac6)
Protein phosphatases and associated proteins [BR:
ccog01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133138796 (hdac6)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133138796 (hdac6)
Membrane trafficking [BR:
ccog04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133138796 (hdac6)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
133138796 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133138796
NCBI-ProteinID:
XP_061113820
LinkDB
All DBs
Position
10:complement(36957961..36982041)
Genome browser
AA seq
1117 aa
AA seq
DB search
MDSNPDPPGSRVLRGSVRSPRSPDSMSKKKSNKPASKKQSLQEARKKGRMDRSKGEDEMI
NQLKDLDLRSKPKATGTGLVYSDAFSRFHCLWDSSHPECPERVTTVMEQLEKEGLLSRCV
RVEARTATEDELLLVHTKEYIELMKSTPKMAESELRMLSDTYDSIYIHPESFLCATLAAG
SVLELIDKVMTSDLRNGFSVARPPGHHAHVDKMNGYSMFNNLAIAARYAQRRHGLERVLI
VDWDVHHGQGIQYIFEEDPSVLYFSMHRYEEGSFWPHLPESDSSAVGTGDGQGYNINVPW
NRIGMKDGDYISAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDFKGEMAASPQCFSVLTHL
LQGLAQGRLVLALEGGYNLQSTADGVCASVRSLLGDSCPPLESPGAPSESALKSISQTIS
ALYPFWTSLQVLEGGLLAEGDPMTLTVQNRPSEGLWERPAQITGLVYDQRMMEHHNMWDS
HHPELPQRISRIFSRHEDLGLVSRCLRIPARLATEEELAMCHSPEHIARIKSTEGMKPRD
LHRLGKEYNSIYISAESYRSALLAAGACFNAAQALMTAQVRNAVAIVRPPGHHAEKDAAC
GFCFFNTAALTARYAQTLAQRPLRVLILDWDIHHGNGTQHMFEEDDSVLYISLHRYDNGL
FFPSSYDADFDRVGQGKGRGFNVNIPWNGGKMGDSEYLAAFHTVVMPIARQFDPELVLVS
AGFDAARGDPLGGYQVTPEGYAHLTHLLMSLAAGRVLLILEGGYNLTSISDSMSMCTSVL
LGDLPPSLPTLPPPQLKAEIAINSVLRTHAPYWSSLRIQIPESLCLSLPSPRGKRTSAGK
GKKYPKKGTPARTPGQECPPITPQPEVAASPALPPVGQEEECLQDITQGLLSLDLDQPAS
ASHSPASVPVGGARPKVKPAPHPSPAGAEKSPAQVFPGKREGEEGVPGVSLQQQSGEQSY
PEPASSAAAVGAQESTALDGASGWSKPSNDQPVFELFCGAQNMDGETMFVVEPLSWCPHL
EAVGPLPAGKIDVFLPCEDCGTDAENWICLCCYKVFCGRYVNQHMVTHGLVTEHPLVLSF
SDLSVWCYACEAYVHNKVLYEARNAAHQSKFGEDIPD
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggattccaatccagaccccccagggtcccgggtgctcagaggctccgtccgctctccc
aggtcacctgactccatgtcaaaaaagaaaagcaacaagcctgcaagcaaaaagcagagt
ctacaggaggccaggaagaaaggaaggatggacagaagcaaaggagaggacgagatgatc
aaccagctgaaagacctggacctacgtagcaagccaaaagccactgggacaggcctggtc
tactctgacgccttcagtcgcttccattgcctctgggacagcagccatccagaatgtccg
gaaagagtgaccaccgtaatggagcagctggagaaggaggggcttctctcccgctgtgta
cgggtggaggccaggactgctacagaagacgagctccttctggtgcatacgaaagagtac
atagagctgatgaagtccacacccaagatggctgagagtgagctcagaatgctctctgac
acatacgactctatttacatccatcctgagtcctttctctgtgccactctggctgctggg
tccgtcctggagctcattgacaaagtgatgacatcagacctgagaaacggattctctgtg
gctagacctccaggtcaccatgcacatgttgataagatgaacggttactccatgttcaat
aacctggccatcgcggctcgctatgcccagagacgacacggcctagagcgagttctgatt
gtggactgggatgtgcatcatggtcagggtatccagtatatttttgaggaggatcccagc
gtgctgtacttctccatgcacagatatgaagagggctcgttctggccccacctgcctgag
tctgacagcagcgctgtgggcacaggggacggtcaaggctacaacatcaacgtgccgtgg
aacaggattggaatgaaagatggagattatatttcagcctttcagcagctccttctgccg
gtggcttatgagttccagccacagttggtgcttgtggcagctggctttgactctgtcatt
ggagatttcaagggggagatggctgccagtcctcagtgcttctctgtgttgacccacctg
ctgcaaggtctggctcagggcaggttggtgctggccctggagggtggatataacctgcag
tccactgctgacggagtgtgtgcgtctgtgaggtcactgctgggagactcctgccctccc
ctggagagtccaggggcccccagtgagagtgctctgaagtcaatatcacagaccatctca
gctctttaccccttctggaccagcctgcaggtcctggaagggggtctgctcgcagagggt
gaccccatgaccctcacggtgcagaacaggcccagtgaaggtttgtgggaacgccccgcc
cagatcacagggctggtgtatgaccagaggatgatggagcaccacaacatgtgggacagc
catcacccagagctcccgcagagaatctcgcgcatcttcagcaggcatgaggacctgggc
ctggtctcccggtgtctccgcattcctgcccgcctggccacagaggaggagctggccatg
tgccacagcccagagcacattgccaggatcaagtctactgagggcatgaagccgagggac
ctccacagactggggaaggagtacaactccatctacatcagcgctgagagctacaggagc
gccctgttagctgctggagcctgctttaacgcagcacaagctctaatgactgcacaggtg
aggaacgcagtggccatagttcgcccccccgggcaccacgcagagaaggacgctgcctgt
gggttctgcttcttcaacacggcggccctgaccgcgcgctacgcccaaaccctggcccag
aggcccctccgcgtcctcatcctggactgggacatccaccacgggaacggcacgcagcac
atgtttgaggaggatgacagtgtgctgtatatatcactccatcgctatgacaacggactg
ttcttcccgtcttcgtatgatgcagactttgatagggtggggcagggcaaggggcggggc
tttaatgtcaacattccctggaacggcgggaagatgggcgactcggagtacctggcggca
ttccacacggtggtcatgcccatcgccagacagtttgacccagagctggtgctggtgtct
gcagggttcgacgcagcgcggggggaccccctgggtgggtaccaggtgaccccagaaggg
tacgcccacctgacccacctgctgatgagcctggcggctggaagagtgctgctgattcta
gagggaggctacaacctcacatccatttcagactccatgtccatgtgcaccagcgtgttg
ctaggagacctgcccccctccctgcccaccctgccaccccctcagctgaaagcagagatc
gccatcaactccgtcctgcgcacacacgccccctactggagctccctgagaatacagatt
ccagagtctctgtgtctgtctctgcccagccccagaggtaaacgcacttccgcaggcaag
ggcaagaagtacccgaaaaaggggaccccagccagaaccccagggcaagaatgccctccc
atcacccctcagccagaagtagcagcgtctccagcactgccccctgttggacaggaggaa
gaatgcctgcaggacatcacacagggcctgctctctctggacctggatcaacccgcttcc
gccagtcacagtcctgcctcagtgcctgtgggaggggctaggccaaaggtgaagcccgcc
cctcacccgagtccagcaggagctgaaaagtcacctgcccaggtgtttcctgggaagcgc
gagggggaagagggtgtgcctggggtctcgctccagcaacagtccggggagcagtcgtac
cccgagccggcctccagcgctgctgcagtcggagcacaggagagtacagccctggatggg
gcgtctggttggtccaagccttcaaacgatcagcctgtctttgagctcttctgtggagcc
cagaacatggacggggagaccatgtttgtggtggaacccttgtcgtggtgtcctcacctg
gaggcggttggcccactgcctgctgggaaaatagacgtgttcctgccgtgtgaagactgt
ggtaccgacgcagagaactggatctgtctctgctgctacaaggtgttctgtggccgctat
gtaaaccagcacatggtgactcatggtttggttacggaacatcctctggtcctcagcttc
tcagacctgtctgtctggtgctacgcctgcgaggcctacgtccacaacaaggtgctatat
gaagcccgaaatgctgctcatcaatccaagtttggagaagacattcctgactag
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