Conger conger (European conger): 133140327
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Entry
133140327 CDS
T10633
Name
(RefSeq) collagen alpha-6(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
ccog Conger conger (European conger)
Pathway
ccog04510
Focal adhesion
ccog04512
ECM-receptor interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133140327
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133140327
09142 Cell motility
04820 Cytoskeleton in muscle cells
133140327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133140327
00536 Glycosaminoglycan binding proteins [BR:
ccog00536
]
133140327
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133140327
Glycosaminoglycan binding proteins [BR:
ccog00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133140327
Hyaluronan
Extracellular matrix or blood plasma proteins
133140327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
vWA_SIBA-E
DUF1194
Integrin_beta
X8
EpmC
Motif
Other DBs
NCBI-GeneID:
133140327
NCBI-ProteinID:
XP_061116173
LinkDB
All DBs
Position
1:63336301..63399227
Genome browser
AA seq
2491 aa
AA seq
DB search
MGATRVLVAVLTLVSCFFSCGAQKTECIKATTADIVFLVDGSSSIAHDQFKKMKHFLHTF
VDGLDIGIHKVRIGLAQFSNDPHQEFLLGEHMEKKALLEQIDNLIHRGGGTKTGKALRFL
QSTYFTEAGGSRASENVPQITVVITDGSSSDEVEVPAQELRKHGVIIFAIGIGEANEEEL
QKIANSPHKHFVISIDNYNTLQKLTRSFKRTVCATVEALIQDPKSADVVILVDSTADIGK
VKNLLNRLVSQLNVGSEAHRIGLAQFGSDSQEEFRLNRYQTKDEVQLHLRNKFRLRPGRD
RHLGKALEHARVTFFNTDAGSRIAEGFQQFLVVITAGESEDNMERAAESIKSDGVTVISI
GLPKSNREELELMASSHYVFQIPSQNIVGISQEIKSIIESEKADGLAAGPSDCRLAQMAD
IVFIVDQSTSKGFQLVRQFISLIVGGLDISSTKVRVGIVLYSDAAKAVIYLNSIKEKDDI
LQFIKMLPYQEGSTKTGAALDFTREYMFSKSTGSRKGVQQLAIVITDRKSQDDVSIASVA
LRRTGVTVYAIGGKDADPNELKQIASHPAREYVFKADSLLTLQTDLQKLLCHDIVQTAFV
DPVTRFNLKTGCSQLEAADIYFLIDESGSIEEEPFKDMQKFIKEFLGTFTIGPDYVRVGV
VKFADIPKLQFSLTVHTTSSSLETAVDNVPRDGGGTNIGKALTFMAPLFKEASESRGEKV
REFLIVITDGNSSDSDPVKQPAKELRDQGITIYAIGVKDAIEDELLQIAGSQERKFFVND
FAALTSIKLEIVRDICSEAVCKDVEGDVLFLIDGSSSIRHTEFEKIGKFMQSLVDKTEIG
SSKFHVGVLQFSNKSQEEFRLDNSYDKGRIKQAISSIRQLKGGTLTGQALSFSSQYFESP
KGGRLNVRKFLIVITNGKAHDDVAKPAAKLRNSGVIIYSIGVLNANNTQLQEISGSRERI
FPVKDFDSLQPLIKDFHYKLCHPEPDCKRTGVADIIFLVDGSTSISNVQFQSIIKFMTSV
VNNTDVGENGTRFGTILYSNEAKSSFTLNQYYTKREVRTAIANLEPPTGDTYTAQGLKYS
LDFFEPKHGGRGAEKIPQILMVITDGEATDPDDLPVWSTAVREKGINIYSIGVEGAKEEE
LEVMAGDPKKVSFVTSYEALEVLYKNLSNMLCGETKPVCDKKTDLVILMDGSNSIDPNDF
TKMRDFVSKLAGRFRVSQESVRIGIAQFSDKQRGHFYLNQYDSITNDSIQAIDQITGEET
LIGGALYFIRQFFQSSHGCRINQNVPQNLLVITDGDPHDGTRVEPEARVLRSMNINVLAI
GVGNNITMQTLKNIAESDDRIFTVDQFDVMKKIEERLVETICDPPQKPEVCSVDIGIGFD
MSQRAQSALQKFKAYFPDIVRYVSSLGELCCLEDKRIKPRIGFLVVEEDGRVIDDYKFEL
YNELVIQKVVALATSRTTFFNVQLLQAFSKKFQEQSRAGVKILIIFTDGFDVDIKKLEAE
SDRLRREGIQALLLVGLEGVRNPSDLQMVEFGRGFGYKQPLSIGMQNVASVMLEQIDTVA
GRECCGVICECHGPVGAHGLRGSPGRKGEPSQNGHHGFPGEEGGIGERGPPGLNGTQGSQ
GCPGKRGIKGSAGYWGYRGEDGDHGLDGVHGEQGATGLPGVPGERGSPGSPGRSGIRGEH
GDRGQPGLRGDPGRPGEDNTIPGRKGENGDSGIHGDEGKDGLPGENGIPGNKGAQGRRGL
PGYQGEKGEPGELGLPGSPGPTGPQGERGLRGLSGQGGALGLPGSQGKPGPAGDEGLPGS
RGPHGQKGQPGDVGGKGAVGPPGPRGMLGLDGRNGILLPGPKGKKGEPGFPGNPGHRGED
GTQGKNGGQGPKGNRGASGNSGRPGEHGEPGASGPPGHPGPRGSAGNRSMSDCQLVNYIR
EKCVCCLGRTECPVYPTELVIALDMSQDVTTQIFERMHEVVETLLGKVSIAESSCPTGAR
VAILSYSSNTKYLIRFSDYHRKHHLLEAVKSIPLERTSNRRNIGAAMRFVARNVFKRVRQ
GVLMRKVAVFITNGPSQDMISITTAVLEFKALDITAAVLAFREPPNVRRAFEADETRSFL
LTVKRPEEQMPDLRQVQQCVICYDPCSPDEACGGINLVPVPLKLDIDLALMVDSSRNMQS
DQYEGMRQLLGSVLEQIAISTQPNGPNNQARVALVQHSASSYPPREGQVPVKVEFDLLAY
KGRNKMKTHVFQSMQQIGGASGLGHAIEWTIQNIMLKAGNPRKTKMVLAIVGGETSSWDR
VKLDTIALQAKCQGVVVFILTVGDEFKVEEIASFPLEQHIVHLGHIKQGEQEYAQRFLRA
FLQILKRGINTYPSATLQRQCEHIRMLNDQGEALEGQAVDRVLVPSIPVLEEGEEVDYID
QAKPQAAFTTTVAEEFESQPSPGRGDENGFSTRTGLCSQRQDIGSCHNYILKWYFDMERN
ECTQFWYSGCGGNDNRFETQEECEALCLTVQ
NT seq
7476 nt
NT seq
+upstream
nt +downstream
nt
atgggggcaacacgggtgcttgtggctgttctgaccttggtgtcttgttttttcagctgt
ggtgcccagaaaacagagtgtataaaggccaccacagcagacattgtgtttcttgtggat
ggttcctcaagcattgctcatgatcaatttaaaaaaatgaagcattttctacacaccttt
gtggatggccttgatatcggcatccacaaggtgcgcataggactggcccagttcagtaat
gatcctcatcaggagtttctcctgggagagcacatggagaaaaaagctctcctggagcag
atagacaacttgatacacaggggagggggcactaaaactggaaaggccctccgattcctc
cagtctacctacttcactgaggctgggggtagccgggctagtgagaatgtcccacagatc
actgtggtgatcacagatggcagctcctctgatgaagttgaggttcctgctcaggagctc
aggaagcatggtgtcatcatcttcgccattggcattggggaggctaatgaagaagaactc
cagaagatcgccaacagcccacacaagcacttcgttatcagcattgacaactacaataca
ctgcagaagctgactcgtagtttcaaacgaactgtgtgcgccaccgtggaagcactgata
caagatccaaaatctgctgatgtggtcatcctggtggacagcacagctgacataggaaag
gtgaaaaacctcctgaaccgattggtcagccagttgaatgttggcagtgaggcacaccgg
attggcctggcacagtttggctctgacagtcaggaggagttccggctgaaccggtatcaa
accaaggatgaggtccagcttcatttaaggaacaagttccgactgcggcctgggagggat
cgtcatttagggaaggccctggagcatgctcgcgtcactttcttcaacacagatgctggc
agccggattgctgaaggctttcagcagtttctggtggtcatcaccgctggggagtcagag
gacaatatggagagggccgcagaatcaattaaatctgatggggtgactgtcatctccatt
ggactacctaaatccaacagagaggagctggagcttatggcctcatcacactatgtgttc
cagattccatcacagaacattgtagggatatcccaggagataaaaagtatcattgaatct
gagaaagctgatggactcgcagcagggccttcagattgcaggttagcccaaatggctgac
attgttttcattgtggaccagtccaccagcaaaggattccagctagttcgacagttcatc
tccctcattgtaggtggccttgatattagctccacgaaagtgagggtgggtatcgtcctg
tacagcgatgctgcaaaagctgtcatttacctgaacagcattaaagagaaggatgatatt
ctgcagttcattaaaatgctgccataccaagagggtagcactaagactggcgctgccttg
gactttacccgtgaatacatgttcagcaagagtacagggagtcggaagggggtgcagcag
ctggccattgtcatcactgaccgcaagtcccaggatgatgtcagcattgcctcggtggcc
ctgcgccgcacaggggttactgtatatgctataggggggaaggatgctgatcctaatgaa
ctgaagcagatcgcctcccaccctgcccgggagtacgtcttcaaggctgacagcctactg
acgcttcagacagatcttcagaagcttttatgtcatgacatcgtacaaacagcatttgtt
gatccagtcacaagattcaatctgaaaacaggctgtagtcagctggaggcagcagacatt
tacttcttgattgatgagtctgggagcatcgaggaagaaccgttcaaggacatgcaaaag
ttcatcaaagagtttctgggcactttcacaattgggccagactatgtacgggttggagtg
gtgaaatttgcagatatccccaaacttcaatttagtctgacagtgcacaccactagcagt
tccctggagaccgctgtggacaatgtcccacgggatggtggggggacaaatattgggaaa
gcgctgaccttcatggccccactgttcaaagaagcctccgagagccggggcgagaaggtg
cgagagtttctcatcgtcatcactgatgggaactcctctgactctgacccggtcaagcag
ccagcaaaagagctgcgtgatcagggtattaccatctatgccattggagtgaaggatgct
atcgaggatgagctgctgcagattgctggttctcaagagaggaagttctttgtcaatgac
tttgctgctctgacatccatcaaacttgagattgtcagagacatttgctctgaagcagtt
tgcaaggatgtggaaggagatgttttgttcctgattgatggttcaagtagcatccgccac
actgaattcgagaagatagggaagttcatgcagtctctagtggacaagactgaaataggt
tctagcaagttccatgtaggtgtcttgcagttcagtaataaatcgcaagaagaattccgc
ttggacaattcctatgacaaagggagaattaaacaggctatcagctccattcgccagttg
aaaggagggactctcacaggacaggcactgtccttcagctcacagtactttgagtcaccc
aagggagggcgtttaaatgttaggaagttcttgattgtgatcactaatggtaaggcccat
gatgacgtagcaaagccagctgcaaagctgagaaacagtggtgtaatcatctactcaatt
ggagtgctcaacgccaacaacactcagttacaggagatcagtggatcccgggaaaggatc
ttccctgtgaaggactttgacagtctccaacctttaataaaagactttcactataaactc
tgccaccctgagcctgactgcaagaggaccggggttgcagacataatctttctagtggat
ggttcaaccagcatttccaacgttcagttccagagcattataaaattcatgacatcagtg
gtcaataacacagatgttggggaaaatggtacaaggtttggaaccatcttgtactctaac
gaagccaaaagcagttttactttgaaccagtactacaccaaaagagaagttcgaacagct
attgccaacctggagccacctactggtgacacatacacggcccagggcttgaagtactca
ctagacttctttgaaccaaaacacggtggccgtggtgctgagaaaattcctcagatcctg
atggtgatcacagatggggaggccacagatccagatgatcttccagtgtggtccacggca
gtgagggagaagggcatcaatatttacagcattggagtggaaggagctaaggaggaggaa
ctggaagtcatggcaggggatccaaaaaaggtctcctttgtgacaagttatgaagccttg
gaggtgctctacaaaaacctgtccaatatgctgtgtggtgaaacaaaaccagtgtgtgac
aagaagactgatctggttatacttatggatggatccaatagcattgatccaaacgatttt
acaaagatgagggactttgtgtcaaaactggcaggcagattccgggtaagccaggaaagt
gtgagaatagggattgcgcagttcagcgataagcaacgtggacacttttatcttaaccag
tacgacagtataaccaatgacagtatccaggccatagatcaaattacgggggaagaaaca
ttgatcggcggcgctctatactttataaggcagttctttcagtcttcccatggctgccgg
attaaccagaatgtacctcagaacctgctggtcatcacagatggggacccccatgacggg
actcgcgtagagcctgaagccagggtcttaaggtccatgaacataaatgtgcttgccatc
ggtgtgggtaataacatcactatgcagactttgaagaatattgcggagtccgacgacagg
attttcactgttgaccaatttgacgtgatgaagaagatcgaggaacgtttggtggaaacc
atatgcgatccccctcagaagcctgaagtctgctctgtggacattggaattggatttgac
atgtcccagagggcccaatctgctctgcagaagtttaaggcatactttcctgacatcgtc
cgatatgtatcctccctgggtgaactctgctgccttgaagacaaaagaataaagcccaga
attggcttcctggtggttgaggaggatgggagggtcattgacgattataagtttgagttg
tataatgagctggtgatccagaaggtggtggccctggcgacctccaggacaaccttcttt
aatgtgcagttgctgcaggccttctctaaaaagttccaggaacaatcccgcgctggtgtg
aagatcctgatcatattcacagatggatttgatgtcgacattaagaagctagaggcagaa
tcagaccgcctcagaagagaaggaatccaagcattgctgttagttggtttggagggagtc
cggaaccccagcgatcttcagatggttgaatttggaagaggtttcggctacaagcagccc
ctgtctatcggcatgcagaatgtagccagtgtcatgttagagcaaatcgacactgtagca
ggacgagagtgctgtggggtgatttgtgagtgtcacggtccggtgggggcccatggtcta
agggggtcgccaggaagaaagggtgagccaagtcaaaacggtcaccatggattccctgga
gaagaaggagggattggtgaaagaggtccacctggattgaatggaacgcaagggtcacag
ggctgtcctgggaaaagaggaatcaagggatcagcaggctactggggctacagaggagaa
gatggagatcatggactagatggggtccatggagagcagggtgcgactggattgccaggt
gtcccaggagagagaggaagtccaggcagcccaggccgcagcggcatccgaggggaacat
ggggacagaggtcagcctggtctgagaggggaccctgggaggcctggtgaggataacaca
atccctggtcggaagggtgaaaatggagactcaggcatacacggagatgaaggaaaggat
ggccttcctggagaaaatggtattccaggaaataaaggtgctcagggaagaagaggtcta
cctggatatcagggggagaagggagagccaggagagctggggcttccagggagccccgga
cccactggtccacagggtgagagaggattaaggggtctctctggacaaggtggagctctt
ggtcttcctgggtcacagggaaaacctggtccagcaggtgacgaaggattgcctggaagt
cgtggaccccatggacagaagggccagccaggagatgttggagggaaaggagcagtcgga
cccccggggccaagaggaatgctgggccttgatggcagaaatggaattcttttgcctgga
cctaaaggaaagaagggagaacccggcttcccaggtaatcctggacaccggggagaagat
ggaacccaagggaaaaatggaggtcaaggtcccaaaggaaaccgtggcgcaagtgggaac
tcaggcaggccaggtgaacatggagaacctggagcttcaggacctcctggacacccgggg
cctagaggatcagctggaaacagatcaatgtctgactgtcaactggtcaattatatcagg
gaaaaatgtgtttgctgccttggtcggacagaatgcccagtttatccaaccgagctggtg
attgccctggacatgtctcaggatgtcactacacagatctttgaaagaatgcacgaggtg
gtggagactctgctagggaaggtgtccattgctgagagcagctgtcccactggggcccgt
gtggccatcctgtcttatagctccaacaccaagtaccttatccgcttctctgattaccac
cgcaagcatcacctactagaggcagtgaaaagcatccccctggagaggacctctaaccgc
agaaacattggggcagccatgaggtttgtggcccgcaacgtgttcaagcgagtccgccaa
ggggtgctgatgaggaaggtagcagtcttcatcaccaacgggccgtcccaggacatgatt
tcaatcaccacggcagtgcttgagttcaaggccctcgatatcaccgccgcagtccttgct
ttcagagagcctcccaacgtccgccgtgcttttgaggctgatgaaaccaggagctttttg
ctcacagtcaagagaccagaggagcagatgcctgacctgaggcaggtgcagcaatgtgtt
atctgctatgacccttgcagccctgatgaggcctgcgggggcatcaatctggtaccggtg
cctctgaagttggacatagacctggcattgatggtggatagctcacgcaacatgcagtcg
gaccagtacgagggcatgaggcagcttctgggctctgtgttggaacagatcgcgattagc
actcagcctaatgggcccaacaaccaagcaagggtagctctggtgcagcacagcgcatcc
agctacccccccagggaaggccaggtgccagtaaaggtggagtttgacctcttggcctac
aagggccgcaacaaaatgaagacacatgtcttccagtctatgcaacagatcgggggagcc
tcagggttaggccacgccatagagtggaccatacagaacatcatgctcaaggctggcaat
cctcgcaaaaccaagatggtcctggccatcgttggaggggagaccagctcctgggacaga
gttaaactggacaccattgccctgcaagcaaagtgtcagggtgtggtggttttcatcctc
actgtaggtgatgaattcaaagtagaggagattgcaagcttccctttggagcagcacata
gtacacctgggtcacatcaagcagggtgaacaagagtatgctcaaagattcctcagagcc
ttcctgcaaattttgaaaagaggaataaatacatatccctcagccacccttcaaaggcaa
tgtgagcatataaggatgctgaatgaccagggggaagcactggaaggccaggccgttgac
agggtcctggtacccagtattcctgtgttggaggaaggtgaagaggtggactacatagat
caggccaaaccacaggcagccttcacaaccactgttgcggaggaatttgaaagccagcca
agcccaggacgtggagatgagaatgggttctccacacgcaccggtctgtgttcccaacgg
caagatatagggagctgtcacaactatatcctgaaatggtactttgacatggaacgaaat
gagtgcacccaattctggtacagtgggtgtggtgggaacgacaataggtttgagactcaa
gaggagtgtgaggcgctctgtctgacagtacaataa
DBGET
integrated database retrieval system
