Conger conger (European conger): 133141170
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Entry
133141170 CDS
T10633
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
ccog Conger conger (European conger)
Brite
Membrane trafficking [BR:
ccog04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133141170 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133141170
NCBI-ProteinID:
XP_061117583
LinkDB
All DBs
Position
11:complement(10743207..10797251)
Genome browser
AA seq
3248 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLKNLTIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVFLLIVPAASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEKEDPNVEKQDTFMEKLVTQVIKNLQVKISNIHIRYEDQVTNPNCPLSFGVSLQ
NLSLQTADENWTPCLLDEKSKLFYKIVRLDSLFAYWNVDSELYSNHSSDEALRCLQDNIA
MQNLIPQDYDFIFRPISARAKLRMNPRSDLDFSAPKVDLMLNLPEVAMELNRLQYVSILE
LLGSVDMMSRNLPYRKYRPDIPVHTNAYQWWQYVITGILEVNVKPALHMWSWKHIRAHRK
KVKSYRELYKKKITSKKPAEDILRELEELEKTLDIFNITLARQQAEMEAMKLGLTIYRPG
MKVEEEESQGWFGWMWGWSSDTPAPKEVKSGGFDEFMTPAEKARLYTAIGYSEAAVNHNL
PKDFEDLKINFQLTSMSISIKESKSKPEIIRLAVMDLRALLTQRPGAQAVKLSAQLNSFD
VTGLPRSQKAPVLLSSRTVERESQEPLLSVMFETNPLDSECTDQRLHVQSQPLEIVYDAV
TVNRMSAFFMPPQELQLDELTSATLMKLEQFRDRTSTGLMYVIETQKVLDLKVNLMASYV
IVPETGFYDTAQNLVLLDMGHLKVSSKSRQELPQLCAGRDKLVDIMSQAYDRFDVQLSNL
QLLYSSTDGDWKSARHQKQSDLHILEPVDLKVVFSRAMVVTDSRMPKFEVSGELPLLSVR
ISDSKLGGVLRLIDSIPLPESHPTPRTSPPIPPLPKPPRQSYTPQMTPRKPPVADLRSSL
IYESCSEEDLFYDAPTSPIDDKPMFEFPSGAVQRSDSTKRRGMVKKDPKKNMTDFLLTFE
ISQVLVQLCRVSEGREITVLHLEIEGLGTRLKLCTFDMSSNTFLKEICLKCPEYMDGEEK
PVHLITTLDNTEVDLLTLEYTKADKNAPEFKTFYKNTEQLIKVNFSSLDIHLHVEALLNA
MNFLSNLMPPPKKEAQEGLEELPAIPEEEEEEEKKEETTITKKITPKKSKFEDVVNLHIR
ADLSCLKVFIRGQKAQISEISIEGLVAGVQMKKKALEVSANLKNIVILDCDKDALYKKAV
SIAGKEVFDFRMINHVDATEGDAYTDMSRVDTSVTLTVGCIQVIFLNKFMSTILAFINNF
QMAKDAVAEATAQAAEKAATGVMELAERSTRISLDIDVKAPVVFLPQSSVSRNVIVADFG
LVTVQNHFYMVQSKTHTKIPPVIDVMKVGLSDLKMYRTTFEEGLFRTEIQLLKPVSLDLS
IKRNLSASWYHSIPDIEITAHLKPMSMVLSQEDMTVALKTLSENLSETSDAVPPPPSPPD
KTDALSTKDSQTSHPGANTVITSAVVEPHKSLKLKTTLKLDFKFDSMTLVLYSPNELQFL
DSRAEDLKLAEFRLGTISTAVQMYSDSSMKASVKLANCILDDKRQRIKMITSRMLEKKPG
VERSVMVEVNYKQGREGTVLDTQVQDIYLCASMEFLHTVADIFIKASQQGFSTPPKNIKP
TSSSSKETAVPAPPVVAKSEINVVVKNPEIVFVADLTRADAPALVMTTQCELVIRSNPEG
QTMTATVRDLKVVACPFLRDKQRNTVTTVLLPCQVFFQSTQTPSGPQTLELSINSLTLKV
SPIIINTVITIQSALTPAAEVAEELASPVPPNLWNRKSWQELKLWFLEEESEEDSLSLAP
LEPLGESLRLDISSICLTLEAGVGHRTVPMLLAKSSFHGDVKDWSTLINLESKLNMEVLY
YNEELGVWEPLLEPLEDDKKDGFRPWTLGLTMKKKPLKSTDLSDEVDYNVPDYKTVICIS
SVDQLNITLSKCGLGMLSNLGTAFAEAASQTADHFQKDQAPLVIKNRLGLAVSVLHSETF
SPIGTTASGQQVELQDGESLNMDYTSTATGSDQFSAMTSLSSKDYFIQPTPVGHTMAGVI
PLIKVGRNMLSVVHKDSGVTRYLVCQIYSVEGSKFVKIRSPFQIINYFSIPFRVFEGSTL
LGLAQPKEEFCVPLGFYRSMLSLQPVTETETEEEFEVSEGFCYEDMGNHVGLCVQQSCRR
ASDPDCVMMVNMVPHKDLLTCHESHEAHGVEEAFDVPYILHLWPTVLLRNLLPYPLTFCL
EENGEHASSTLQEGHSAQLHAAVMDRSRLQLRLLDYLSQDWQGEYALRTAQEEIAFTAFR
SLAPDSAQLSPEGAELDIAVHVTYDPGQTVVAVHSPYWMVNKTDRLLQYKADDIHRKHPR
DYDRPLLFSFKPRNFLQNNKVRLMVSDSELSDEFSLDTVGSHGDVKCKGRSKDYLVGVKI
DASSFSLTRIVSFVPFYLLVNKTKYTISVSEEQEDDWTKAPPDQVAVPFWPEKDSKKVKV
KVEGCHSTPHTINFHKQENCLLLHLDNTMGGIIVDVNLTEHSTVIRFSEYHDGAAPFLII
NHTKEQTLEFYQSCSDQQDSNWVANDLLDLSFSNGEEGSLSSTQKEKDELAPGNAVHYTW
AEPTGSRTLKWKCGNHTGELRSEQDMLLDVNEEGKLFLISFYEGLQRVALFTEDKRIYKL
LCESEKAELAEQEVVLSLRNVGVSLVNNTTSQEVSFIGITSSDVVWESQPKKKARWKPMS
NKDAAQLESLFVVYNQSSPVDHQILQLANGMQVSLTPTGTDMRVLHPYDSPLRRNFLPGV
KVEYSVSARQKAYRVQINRIQIQNQLPGAIFPYVFYPIKPPKSVTMDSEPKPLTDVSIVT
RSAGHSDISRIKYFKVLIQEMDLKLDLGFLYAILDLFTQENAAAVSSEQEVELFEKDIVY
LKTELNHASATDTSPISLYEYFHISPIKLHLSFSLSSGGDDGNKEKRETEVIPVQSLNLL
LKSIGATLTDVQDVVFKLAFFELQFQFRTTQQLQSEVIRHYSKQAIKQMYVLVLGLDVLG
NPFGLIRGLSEGVEAFFYEPYQGAIQGPEEFVEGMALGVKALVGGAVGGIAGAASRITGA
MAKGVAAMTMDEEYQQKRREAMNKQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGAQ
KEGAAGFFKGMGKGLVGAVTRPTGGIIDMASSTFQGIKRAAETSQDVESLRPPRFFHEDG
VIRPYKEREGVGSQILQKIENGRFAKFRYFAHAKVNETDFLMITKSCIFFVTKGTFGQLT
CEWQYCFDEFTKEPIIVEDRRLRIEAKERVKSVFHAKEFGKIINFKTPEIAKWVLAKLED
ARESLPKC
NT seq
9747 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtctctggtggtggacgtcctgaacaggttcttgggggactatgttgtg
aacctggacagctcacagctaaagcttggaatttggggaggggatgccgtattaaaaaac
cttacaataaaggaaaatgcgctgagtcagttggatattccttttaaggtccgagccggg
cacataggacggctggagctgaagatcccatggaagaacctgtacactcagtctgtggaa
gctacactggatggagttttccttctcatagtccccgcggccagtataaaatacgatgca
gagaaagaggagaagcagctgcaggaggcgaggcagagagagctgcagcggatcgaggag
accaaacagaaagcagcagagaaagaagatccaaatgtggagaagcaggatacctttatg
gagaaactggtcactcaggtgatcaagaacctgcaggtgaagatctccaacatacacatc
cgatacgaggaccaggtaaccaacccaaactgccctttgtcctttggagtgtcactacaa
aacctcagtctccagaccgcagatgagaactggactccctgtctgttggatgagaaatcc
aagctcttctacaagatcgtgcgtctggacagcctcttcgcctactggaatgtggactcc
gagctctactccaatcacagctcggacgaggctctgaggtgcctgcaggacaacatagcc
atgcagaacctcattccacaggattacgacttcattttccggccgatctctgcgcgggcg
aagctgaggatgaacccgcgttcggacttggacttctcggcaccaaaagtggacctgatg
ctcaatctgcccgaggtggccatggagctgaaccggctgcagtacgtgagcatcctggag
cttctggggtctgtggacatgatgtcccgcaacctgccctaccggaagtaccgccctgac
atccccgtgcacaccaacgcctaccaatggtggcagtatgtgataacggggatcctagag
gtgaacgtcaagcccgcgttgcacatgtggtcctggaaacatatcagagctcaccggaag
aaagtcaagagctatagagagctctacaagaaaaagatcaccagcaagaagcctgccgag
gacatcctgcgtgaactggaggagctcgagaaaacactggacatttttaacatcacgttg
gcacgccagcaagcggagatggaggcgatgaagttggggctgacgatctacaggccgggg
atgaaggtggaggaggaggagtcccagggctggttcggctggatgtggggctggtccagt
gacaccccggccccgaaggaggtcaaatctggagggtttgatgagttcatgacccctgca
gagaaggcccggctctacactgccattggctacagcgaggcagctgtcaatcacaacctg
cccaaggactttgaggatttgaagataaatttccagttgacaagcatgtcgatttccatc
aaagagagcaaaagcaaaccagagataatcagactggctgtgatggatctgagggccttg
ctgacgcagagacctggagcacaagccgttaagttgtcggcgcagctgaactcgttcgat
gtgacgggtctccctcggagccagaaggccccggtcctgctgtcctcgcgcaccgtggag
agggagagccaggagcccctgctcagcgtgatgttcgagaccaaccccctggacagcgag
tgcacagaccagcgcttgcacgtgcagtcccagccgctcgagatcgtctacgatgcggtg
acggtaaaccgcatgtctgcattcttcatgccaccgcaagaactgcagctggacgagctc
acatctgccaccctcatgaagctggagcagttcagagaccgaacgtctacaggcctgatg
tatgtcattgagacccagaaggttctggatctgaaggtgaacctcatggcttcctatgtc
atcgttcccgaaacgggcttttatgacaccgcccagaacctggtgctactggacatgggg
catctgaaggtgagcagtaagagcaggcaggagctgccccagctgtgcgccgggcgggac
aaactggtggacatcatgtcgcaagcgtacgaccgcttcgacgtgcagctcagcaacctg
cagctgctctacagcagtaccgacggagactggaagagcgctcggcaccagaagcagtcg
gacctgcacatcctggagccggtggatctgaaggtggtgttcagccgggccatggtggtg
acggactccaggatgcccaagtttgaggtttcgggggagctgcccctgctctctgtgcgc
atctcagacagcaaactggggggcgtcctgcgactgatcgacagcatccccctcccagag
agccaccccaccccccgaacctcgccgcccatcccacctctgcccaagccccccaggcag
tcgtacacccctcagatgacccccaggaaaccacctgtggcagacctgcgtagctctctt
atctacgaatcctgctcagaggaggacctcttctacgacgctcccacctctcccatagac
gacaagcccatgttcgagttcccgagcggcgcagtccagcgttcagactccacgaagagg
agggggatggtgaagaaggacccaaagaagaacatgaccgacttcctcctgacctttgag
atcagccaggtgttggtccagctgtgcagggtatcggaggggcgtgagatcaccgtcctg
cacctggagatcgaggggcttgggacgagactgaagctctgcaccttcgacatgtcctcc
aacacattcctgaaggaaatctgcctcaaatgccccgagtacatggatggagaggaaaag
ccggttcacctcatcaccactctggacaacactgaggttgaccttctgactctggagtac
accaaggcagacaagaacgctccagaattcaagacattttacaaaaacactgagcagctt
ataaaggtgaatttctcctctctggatatacacctgcacgtggaggctctgctcaacgcc
atgaatttcctcagcaacctgatgcctcctccaaagaaggaggcccaggagggcctggag
gagctgcccgccatcccggaggaggaggaggaggaggagaagaaggaggagaccaccatc
accaagaaaatcacaccaaagaagtccaagtttgaggatgtggtgaatttgcacatcaga
gcagatctgtcctgtttgaaggtgtttatccgtggccagaaggcacagatctctgagatc
agcatcgagggccttgtggctggagttcagatgaagaagaaggcgttggaggtctcagcc
aacctgaagaacattgtcattctggattgtgacaaagacgccctgtataagaaggcggtg
tccatcgcggggaaggaggtgtttgacttccgcatgattaaccacgtcgatgccaccgag
ggcgacgcctacacggacatgagccgggtggacaccagcgtgaccctgaccgtgggctgc
atccaggtcattttcctcaacaagttcatgtccaccatcctggccttcattaataacttc
cagatggcgaaggacgcggtggcggaggccacggcccaggcggcagagaaggcggccacc
ggcgtgatggagctggccgagcgctccacccgcatctcgctggacatcgacgtcaaggcg
cccgtggtcttcctgccgcagtcgtccgtctcccgcaacgtcatcgtggccgacttcggc
ctggtcaccgtgcagaaccacttctacatggtgcagtccaagacgcacaccaagatcccc
cccgttatcgacgtcatgaaggtcggcctcagcgacctgaagatgtacaggaccaccttt
gaggaggggctttttcggactgagatacagcttctcaagccggtcagcctggacctgtca
atcaaacggaacctttctgcatcctggtaccacagcatccctgacatcgaaatcaccgcc
catctcaaacccatgagtatggttctcagtcaggaggacatgacagtggcgttgaagact
ctgagtgagaacctgagtgagacgtcggatgccgttcctcctcctccttctcctccggat
aaaaccgacgccttgtccaccaaggactcgcagacatcccaccctggagcaaacacagtg
ataacgtctgccgttgttgagccgcataagagcttgaagttgaagaccacgctgaaactg
gacttcaagttcgactccatgaccctggtgctgtacagtccgaacgagttacagtttctg
gactctcgtgcggaagatctgaagttggccgagtttcggctgggcacgatctccacggct
gtgcagatgtactctgacagctccatgaaggcgtccgtcaaactggccaactgcatcctg
gacgacaagcggcagaggatcaaaatgatcacctccaggatgctggagaagaaaccaggc
gtggagcgtagcgtgatggtggaggtgaactataagcagggccgggagggcacggttctg
gacacgcaggtgcaggacatttacctgtgcgccagcatggagttcctgcacaccgtggca
gacatcttcatcaaagccagccaacagggcttctctaccccacccaaaaacatcaaaccc
acctcttcctcctccaaggagacggcagtgccagcaccccctgtcgtggctaagtcagag
ataaacgtggtggtgaagaacccggagatcgtgtttgtggcggacctgacccgtgccgac
gccccggccctcgtcatgacgacgcagtgtgagctggttatacggagcaacccggagggc
cagaccatgacggcgaccgttcgggacctgaaggtggtggcctgcccgttcctgcgcgac
aagcagaggaacacggtcaccaccgtgctgctgccctgccaggtgttcttccagagcacc
cagaccccctccggcccacagaccctggagctcagcatcaactccctcaccctcaaggtg
tcccccatcatcataaacacggtgatcaccatccagtcggcactgaccccggcggctgag
gtggccgaggagctggccagccccgtccccccgaacctgtggaacaggaagagctggcag
gagctgaagctgtggttcctggaggaggagagcgaggaggactccctgagtctggccccg
ctggagcccctgggagagtcgctgcggctggacatcagctccatctgcctgaccctggag
gccggcgtgggccaccgcacggtccccatgctcctcgccaagtcctccttccacggggac
gtcaaggactggagcacgctcatcaacctggagagcaagctcaacatggaggtgctgtat
tataatgaggagttgggggtgtgggagcccctgctggagcctctggaggacgataagaaa
gacggattccggccgtggaccctgggtctcactatgaaaaagaaaccgttgaaaagcacg
gatttgtcggatgaagtggattacaacgtccccgactacaagaccgtgatctgcatcagc
tccgtggaccagctcaacatcaccctgtccaagtgcggactgggcatgctcagcaaccta
ggcacggcctttgcggaggctgcgagtcagacagcagatcacttccagaaggaccaggcc
ccgctggtcataaagaaccgcctgggcctggcagtgtctgtgctgcacagcgagaccttc
agccccatcggcactacagcctccggccagcaggtggagctgcaggacggcgaaagcctc
aacatggactacacctccaccgccaccggcagtgaccagttctctgccatgaccagcctg
agcagcaaggactatttcatacaacccactccagtgggccacactatggccggcgtcatc
cccctgattaaggtgggccggaacatgctcagcgtggtgcacaaggactcgggcgtcacc
cgctacctggtgtgccagatctactctgtggaggggagcaagttcgtcaagatccgctcg
cccttccagatcataaattacttctccatcccgttccgggtgtttgagggatccacactg
ctgggcctggcgcagcccaaggaggagttctgcgtccccctgggcttctacaggtccatg
ctcagcctccagcctgtgacagagacggagactgaggaagagtttgaggtgtcggagggg
ttctgctacgaggacatgggcaatcacgtcggactgtgcgtacagcagagctgccgtcgc
gccagcgaccccgactgcgtgatgatggtcaacatggtcccgcacaaagacctcctcacc
tgccacgagtcccacgaggcccacggcgtcgaggaggccttcgacgtgccctacatcctc
cacctgtggcccacggtcctgctccggaaccttctgccctaccctctcaccttctgcctg
gaggagaacggagagcacgcctccagcaccctgcaggagggccactccgcgcagctgcac
gccgccgtcatggacaggtctcggctgcagctgcggctcctggactacctgagccaggac
tggcagggcgagtacgccctgcggacggcccaggaggagatcgccttcaccgccttccgc
tcgctggccccggacagcgcccagctgagcccggagggcgccgagctggacatcgccgtg
cacgtgacctacgaccccgggcagacggtggtggccgtgcactcgccctattggatggtg
aacaagacggaccgcctgctgcagtacaaggccgacgacatccacaggaagcacccgcgg
gactacgacaggcccctgctcttctccttcaagccccgcaacttcctgcagaacaacaag
gtgcgactcatggtgtcggacagcgagctttcggacgagttctccctggacactgtgggt
agccatggagacgtgaaatgcaaaggccgcagcaaagattacttggtgggggtaaagatt
gatgccagcagtttcagcctgacacgcattgtgtccttcgtgccgttctacctgctggtg
aacaaaaccaagtacaccatcagtgtgagcgaggaacaggaggacgactggaccaaagcc
ccaccggaccaggtggcagtgccgttctggccagagaaggacagtaagaaagtcaaggtg
aaggtggagggctgccactccaccccccacaccatcaacttccacaagcaggagaactgc
ctgctgctgcacctggacaacacgatgggcgggattattgtggacgtgaacctgacggaa
cattccaccgtgatccgcttctcggaataccacgatggcgccgcccccttcctcattatc
aaccacaccaaggagcagaccctggagttctaccagagctgctcggatcagcaagactca
aactgggtcgccaacgatctcttggatctgtccttctccaatggagaagaaggcagcttg
tccagcacacagaaggagaaggacgagctggctccggggaacgcagtgcactacacctgg
gctgagcccaccggctcacgcacgctcaagtggaagtgcggaaaccacacgggggaactg
cgcagcgaacaggacatgctgctggacgttaacgaggaggggaagctgttcctcatctcc
ttctacgagggtctccagcgggtggcgctgttcacggaggacaagcgtatctacaagctg
ctgtgcgagagcgagaaggctgagctggccgaacaggaagtggtcctgtccctgaggaac
gtgggcgtctctctggtcaacaacaccaccagccaggaagtgtcattcattggcatcact
agctccgatgtggtgtgggagtcgcaacccaagaagaaggctcgctggaagcccatgagc
aataaagacgcggctcagctggagagtctcttcgtggtgtacaaccagagcagccccgtg
gaccaccagatcctgcaactggctaacggcatgcaggtgtctctgacccccactggtacg
gatatgagggtcctgcatccgtacgattcgccgctcaggaggaacttcctgcccggagtg
aaggtggagtacagcgtctcggctcggcagaaggcttaccgagttcagatcaaccgcatc
cagatccagaatcagctgcctggagccatcttcccctacgtattctaccccatcaagcct
cccaagtctgtcaccatggactcagaacccaaacccctgactgatgtcagcatcgtcacc
agatctgccggccattcggacatttcccgtatcaagtatttcaaggttctaattcaggag
atggacctgaagctggatctgggctttctgtacgccatcctggacctcttcacccaggag
aacgccgccgctgtttcgtccgagcaggaggtggagctgtttgagaaggatatcgtgtac
ctgaaaacggaactgaatcacgcctctgccacagacacaagtccaatcagtctctatgag
tacttccacatctcccccatcaaactgcacttgagcttctccctgagttcagggggagat
gacggcaataaggagaagagggagacagaggtcataccggtgcagtccctcaacctgctg
ctgaagagcatcggcgctacgctaaccgacgtgcaggacgtcgtcttcaagctggcattc
tttgagctgcaattccagttccgcacaacacaacagctccaatctgaggtcatccgacac
tactctaaacaggccataaagcagatgtacgttctggttctggggctggatgttttgggg
aaccccttcggcctgatccgggggctctctgagggggtggaggctttcttctacgaaccg
taccagggtgctatccaaggtccggaggagtttgtggagggcatggctctgggagtgaag
gcgctggtgggcggggctgtggggggcatcgccggggccgcctccaggatcacgggcgcc
atggcgaagggagtggctgccatgacgatggatgaggaataccagcagaagcggcgggag
gccatgaacaagcagccgagcgggctgagggagggcctgacccgcggcggcaaggggctg
gtctccggttttgtcagcggaatcacaggaatcgtcacaaagcccattaaaggagcacag
aaggagggtgcagcagggttctttaaggggatggggaagggcctggtgggggcagtgaca
cgccccacggggggcatcatcgacatggccagcagcaccttccaggggatcaaaagggca
gcggagacgtcccaggacgtggagagcctgcgaccgccccggttcttccacgaggacggc
gtcatacgcccgtataaggagagggagggcgtcggcagccagattttacagaaaattgaa
aatggaagatttgccaaatttagatacttcgctcatgccaaggtgaacgaaacggatttc
ctgatgatcactaaaagctgtatattctttgtgacgaaagggacatttgggcaactgacc
tgcgagtggcagtactgctttgatgagttcaccaaagaaccaatcattgttgaggatagg
agactgcggattgaagccaaggagagagtcaagtcagtgttccatgccaaagagtttggg
aagatcattaacttcaaaactcctgaaatagccaagtgggttctggccaagctggaagat
gcaagagagagtctgccgaaatgctga
DBGET
integrated database retrieval system
