Conger conger (European conger): 133141274
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Entry
133141274 CDS
T10633
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ccog Conger conger (European conger)
Pathway
ccog03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133141274 (thoc5)
Spliceosome [BR:
ccog03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133141274 (thoc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133141274
NCBI-ProteinID:
XP_061117753
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Position
11:24756660..24772827
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AA seq
768 aa
AA seq
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MSSDALKKRKPKVIRNEGGTPENKRCRAEGDQDARVYNEDVELEGRDPAQDYDQYKDTCE
ALAKLMAEIQELKTNGSRDNSIEIEERRMQSCIHFMTLKKLNRLAHMRLKKGRDQTHEAK
QRVDALHLQLQNLLYEVMHLQKEISKCLEFKSKHEEIELVSEDEFFQEAPPDISRPQLTK
DDPHQLTLARLDWELEQRKRLAEKYKESLASKEKILKGIEVKKEYLSSLQPGLNAIMQAS
LPVQEYLSMPFEQAQKQNEVARHLPPPLYVLLVQANAYSQACDKNLAVSINGDVDEAKAL
SKPPEDSQDDESDSDAEEEQQNTKRRRPTLGVQLDDKRREMLKRHPLSLCVDLKCKDGSV
LHMFFYYLMNLNIMTVKVKVSTAADLSGAVSAGELLNPEMLLNCLYANDQGTETPNPANR
YQFDKVGITTFGDYVTELGHPYIWVQNLGGLLFPSDRPECVPGGSSLSASHMETAMKLLR
GRLQSRLALHKQFSSLEHGIVPVSCECQHLFPAKVVSRLARWTTITHQEYAELPFTQHVS
LAGLAQESDLYFLAVIERGTARLQAAMVLNPRYPEVTPLFALSLNWKGERSGRTDDNLRA
MESEVNVFKSELQGPRPGYQLLTNQLQRLCLCLDVYLETESQDDSVEGPREFPREKMCLR
TARQWAIGGTTGSVFMISKHPIREYLAPDITEVTNLDQCTIMALFCAYSQDKCPSPSPIL
FFIFLPKVVWGILNLHTHTAIVKFLLAWWSQIGLCFILHCHLLKSWNS
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgacgctctgaagaaacgcaagcccaaagtgattcgcaatgagggaggcaca
ccggagaataaacgttgcagagcggaaggagaccaggatgccagggtgtacaacgaggat
gtggaattggagggaagagaccctgcccaggattatgatcagtacaaggatacctgtgaa
gcactggccaaacttatggctgaaatacaggaactgaagaccaatggctccagagacaat
tcgattgaaatagaagagcgacgcatgcagagctgcatccattttatgaccctgaagaag
ctgaaccgcctggcacacatgagactgaagaagggccgtgatcagactcatgaggcaaag
caacgagttgatgcactccatcttcagcttcagaacctgttgtatgaagttatgcacctt
caaaaggagataagcaagtgtttggagttcaagtcaaaacatgaggagatagaacttgtc
agcgaggacgagttcttccaagaggcccccccagacatatcgcgtcctcagctcaccaag
gatgaccctcaccaactcactcttgcccgtttggactgggagctggagcagaggaagagg
ctggctgaaaaatataaggagtcacttgccagcaaggagaagatacttaaaggcattgag
gtgaagaaggaatatctgagcagcttgcagccaggcctcaatgccatcatgcaggcctcg
ctccctgtgcaggagtatctgtccatgccctttgagcaggcacagaagcagaatgaggtt
gcccgccatctgccaccaccgctatatgtgttgctggtccaggctaatgcttacagccaa
gcttgtgataagaacctggctgtgtccatcaatggagatgtggatgaggccaaagccctg
tccaagccgccagaggactcccaagatgatgaaagtgactctgatgcagaagaggagcag
cagaacaccaagcgtcggaggcctactcttggtgtccaactggatgacaaacggcgggag
atgttaaagcgccaccctttgtccctttgtgttgacctcaagtgtaaagatggcagtgtg
ctgcacatgttcttctattacctcatgaacctcaacatcatgactgtgaaggtcaaggtg
tcgactgctgctgacctgtccggggccgttagtgctggggagctgttgaaccctgagatg
ctgctcaactgcttgtatgccaatgaccagggcacagagacacccaacccagccaaccgc
taccagtttgataaagtgggaatcaccacgtttggagactatgtgactgaacttggacac
ccctacatttgggtgcagaacctgggaggactgctgtttcccagtgacagacctgagtgt
gtcccaggaggcagctctctgagtgccagtcacatggagaccgccatgaagctgctaaga
ggtcgtctccagtcacgcctagccctgcacaagcaattctcctccctggagcacggcatt
gtaccagtgtcctgtgagtgccagcaccttttccctgcaaaggtggtttcccgcctggcc
cgatggaccacaataacccaccaggagtatgcggagttgccattcacacagcatgtttcc
ctggctggcctagctcaggagtcagacctgtacttcttggctgtcattgagagaggcacg
gctcgacttcaggctgctatggtgctgaacccccgctaccctgaggtcaccccgctcttt
gccctgtccctcaactggaaaggggaacgcagcggcaggacagacgacaacctgcgggct
atggagagtgaagtcaatgtattcaagtcagaactgcaaggcccccgtccaggctaccag
ctgttgaccaatcagctgcagcgtctgtgtctgtgcctggatgtgtatttggaaacggaa
agtcaggatgatagtgtggagggcccccgggaattcccgcgtgaaaagatgtgtcttcgc
actgcacgacaatgggcaataggaggcaccacaggcagtgttttcatgatcagcaagcac
cctatcagagaatatttggctccagatattacagaggtaacaaatttggatcagtgcaca
ataatggcattattttgtgcttattcacaggacaaatgtcccagcccctcacccatttta
ttttttatttttcttccaaaagtggtgtgggggattctgaacttacacacacacacagcg
attgttaaattcttactggcttggtggtcacaaataggactttgctttattttgcattgt
cacttattgaaatcctggaactcttaa
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