Conger conger (European conger): 133141811
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Entry
133141811 CDS
T10633
Symbol
rc3h2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133141811 (rc3h2)
04121 Ubiquitin system [BR:
ccog04121
]
133141811 (rc3h2)
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
133141811 (rc3h2)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133141811 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
Prok-RING_4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133141811
NCBI-ProteinID:
XP_061118554
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All DBs
Position
12:5722564..5764816
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AA seq
1058 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDGSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDLLPVNCALLQLVGAQVSEQTVTLGSVVESEHYEASRRSVEELALYLKPVGGGKGVTGL
GQSVLSRPMQRKLVTLVNCQLVEEEGRVRALRAGRSLGERTVTELILQHQNPQQLSANLW
AAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIGH
VVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQWS
SLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRSHLELLANID
HNPDAASPSWEQLEQVMLAVKVVVHSLVDFIQNFSKKTHETPQPQPNSKYKTSMCRDLRQ
QGGCPRGTNCTFAHSQDELEKFRMRNKKISGVVRPFPLPQTLLGKTVIVPAGGVSLGGPE
VTETGVSPTESAAPPLLIPRGGDTLEKMRAARNTSNGAVAPGHPATGPSEQKTISPPKTP
VSHICATSPHVPGAGADSGSTHPKLGHFITRAGLFPPQQSDVYYQDPPAPYDPPPYQPAN
NYYASTVPQLKQCPARFFRSGNVPESSLPPAVTPYSEQHPSFPPRDRLGPAAYPPPPQYG
HLTHGHGVYAPVYDSRRLWRPPMYHREDARSNSLPPEVLHSSVYQTPLRERYNSLDASFC
TDGEQRPTLQRDMYSHMPVGYEELFRRKPEQWAQHQLGSRPSSSSPLFFSSELPESVGGD
CVGCKSRGEENLSHYSPWSCGTISTCISTVKSDPPNIDLEGGRVKARLHSFEAPRRRKDE
DFIPFGEGPIISKWGAISRASRTDYHTTYPVQATAPQGGPTTTPINFRDYSLYHQSDYRW
RSDAPSHSCFLQSEQLGVSELRSCCKSANIREKQSTDLLQADYCKDSADREADRDIELEL
SALDMEDSTSQDDEAEESLDLRMRPQGTHLSNGSVTGNSPQEQLSPDKMAAHLLKKMAFR
KSGSPTRLGVGKLVMKTGPSGVGEVSHPSGGAEMLLNS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcggcgcagtggacagagttcctgtcctgccccatctgctacaatgag
tttgacgggagcggccacaagcccatcagcctgggctgctcccacaccgtgtgcaagacc
tgcctccacaagctgcaccgcaaggcctgccccttcgaccagaccgccatcagcaccgac
atcgacctgctgcccgtcaactgtgccctgctgcagctggtgggagcgcaggtgtcggag
cagacggtgaccctgggcagtgtggtggagagcgaacactacgaggcctccaggaggtcc
gtggaggagctggccctctacctgaagccggtcggcggtggaaaaggtgtgacgggcctg
ggtcagagcgtgctgagccggcccatgcagcggaagctggtgacgctggtgaactgccag
ctggtggaggaggagggccgggttcgggccctgcgggcgggccggtccctgggcgagcgc
acggtcaccgagctcatcctgcagcaccagaacccccagcagctctccgccaacctgtgg
gccgccgtgcgcgcccgcggctgccagttcctgggccctgccatgcaggaagatgccctg
aaactggtcctgttggctctggaggacggctcagccctgtcccggaaggtgctggtcctg
ttcgtggtccagaagctggaggcgcggttcccccaagcgtccaagaccagcatcggtcat
gtggtccagctgctgtaccgggcctcctgtttcaaggtgaccaagcgagacgaggactcc
tcgctcatgcagctgaaggaggagttccgcacctacgaggcgctgcgtcgcgaacacgac
gcccagatcgtccacatcgccatggaggcggggctgcgcatctcgcccgagcagtggtcc
tccctgctatacggagaccttgtccacaagtcccacatgcagtccatcatcgacaagctc
cagtctccagaatcctttgcaaagagtgtccaggaactgaccatcgttctgcagaggacg
ggagacccagccaacctgaacagcctaagatctcacctggagcttctggccaacattgat
cataatccagacgctgcctccccctcatgggaacagctggagcaggtgatgctggcggtg
aaggtggtcgttcacagcctggtggacttcatccagaacttcagcaagaagacccacgag
actccgcagccgcagcccaacagcaagtacaagaccagcatgtgtagggacctgcggcag
cagggaggctgtcccagagggaccaactgcaccttcgcccactcccaggacgagctggag
aagttcaggatgagaaataagaagatcagcggtgttgtgagacccttccccctgccccag
acgcttttggggaaaactgtgatcgtcccagcgggcggggtctccctggggggtcctgag
gtaacagaaacgggggtgtcccccacagagagcgcggccccccccctgctcatcccccgg
ggcggggacacactggagaagatgagggcggctcgaaacacatccaacggggcggtcgct
cctggccatccggccaccggtcccagcgagcagaagaccatctcacccccaaagacaccc
gtcagtcatatctgtgcaacctcacctcacgtccccggtgctggagctgacagtggctcc
acacaccccaaactggggcatttcatcaccagggcgggccttttccctccccagcaatcc
gacgtgtactaccaggatccgccggcaccgtatgaccccccgccctaccagccagccaat
aattactatgcctccacggtgccccagctgaaacagtgccccgcccgcttcttccgctcc
ggcaacgtgcccgagtcctcgctcccgcccgccgtgacgccgtactccgagcagcacccc
tccttccccccgcgggaccgcctcgggcccgccgcctaccccccgcccccgcagtacggt
cacctgacccacggccacggcgtgtacgcccccgtctacgacagccgccgcctgtggcgg
ccgcccatgtaccaccgcgaggacgcccgcagcaactcgctcccccccgaggtgctgcac
tcctccgtgtaccagacgcccctgagagagcgctacaactcgctggacgcgtccttctgc
acggacggggagcagaggcccacgctacagagggacatgtatagccatatgcctgttggg
tatgaggagctcttcagacgaaaaccagaacagtgggcccagcaccaactgggcagccgg
ccttcatcctcctccccgctcttcttcagctcagagctcccagagagtgtgggcggggac
tgcgtgggctgtaagtcccggggggaggagaacctctcccactactccccctggtcctgt
ggcaccatcagcacctgcatcagcaccgtcaagtccgacccgcccaacatcgacctggag
ggcgggagggtgaaggcccgtctgcacagcttcgaggctcctcgtaggcggaaggacgag
gacttcatccccttcggagaggggcccatcatctccaagtggggcgccatctcccgcgcc
tcccgcacggactaccacaccacctacccggtgcaggccaccgccccccagggagggccc
accaccacgcccatcaacttcagagactacagtctgtaccatcagagtgactatagatgg
agatctgatgctcccagtcactcctgcttcctacagagtgagcagctcggtgtgtcggag
ctgagatcctgctgcaagtctgccaacatcagagaaaagcagagtacagacctgctgcag
gctgattactgtaaggacagcgcagacagggaggcggacagagacatcgagctggagctg
tccgctctggacatggaggactccacctcgcaggacgacgaggctgaggagtctctagat
ctgaggatgcgtccccaaggcactcaccttagcaacggctcggtgacggggaacagccca
caggaacagctctctcccgacaagatggccgctcacctgctgaagaagatggccttcagg
aagtctggctcgcccaccaggctgggcgtggggaagcttgtgatgaagacggggccgtcg
ggggtgggggaggtgtctcaccccagcgggggggccgagatgcttctcaacagctga
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