Conger conger (European conger): 133141838
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Entry
133141838 CDS
T10633
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133141838 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133141838 (cnot6l)
Enzymes [BR:
ccog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
133141838 (cnot6l)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133141838 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
133141838 (cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
133141838
NCBI-ProteinID:
XP_061118598
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All DBs
Position
12:complement(39349762..39360157)
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AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRLYTIMSAEEAANGKKSYWAELEISGRVKSLSSSLWTLTHLTALHLND
NSLSRIPPEIAKLQHLVYLNLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILKLYQEPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQVIP
TAVFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIANCDADILSLQEVETEQ
YYSLFLQTLKERGYDGYFCPKSRAKLVSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVSKDIFSGGTKPLQEKQLLLVANAHMHWDPEY
SDVKLIQTMMFISELKSIAEKASGSEASSSPTSEPVSIPIVLCADLNSLPDSGVVEYLSN
GGVAENHKDFKELRYNECLTNFSCNGKNGNSEGSITHGFQLKSAYDNNLMPYTNYTYDFK
GVIDYIFYSKTHMSVLGALGPLETQWLTDNSITGCPHPHIPSDHFSLLAQLELHPPLSPL
NGLHLPVHR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcccccggatcctcgcagattatataccatcatgtcagcc
gaggaggcagccaatggaaagaagtcttactgggcggaattggagatctctgggcgggta
aagagtttgagtagctcgctctggacactgacacacttgaccgcgttgcatcttaatgac
aacagccttagccgcattccgccagaaatcgccaagctccagcacctggtctatctgaac
ctgtcctccaacaaactgcgcagcttgccggcagaacttggaaacatggtgtctctcagg
gaattgcttttaaataacaatcttttacgggttctgccttatgaacttgggcggctgttc
cagctacaaaccctaggtttgaaaggaaatcctctatcacaagatatcctcaaactctac
caggagcctgatggaaccagaaagctccttaattacatgctggacaatctagcagtacac
ccagaacaacttcccccaagaccatggatcactctgaaagaacgagatcaagttatcccc
acagctgtgttcactgtcatgtgttacaatgtgctgtgtgacaagtacgctacacgacag
ctatatggctactgtccatcctgggcactcaactgggagtacaggaagaagggaatcatg
gaggaaatcgccaactgtgatgctgacatcctcagccttcaggaggtggaaaccgagcaa
tactactccctttttcttcaaacgctgaaggagcgtggatacgatggttatttctgtcca
aagtcccgtgccaaattagtgtcagaacaagaaaggaaacatgtggatggctgtgcaata
ttcttcaaaaccgagaaatttacactagtgcagaagcacactgtagagttcaatcaggtt
gctatggcaaactctgaaggatcagaagtcatgctgaatcgagtaatgacaaaagacaac
attggggttgctgtattgttggaagtcagtaaggacatcttttccggtgggactaagccc
ttgcaggagaaacagctcctcctggtggccaatgcgcacatgcactgggacccggagtac
tcggacgtgaagctgatccagaccatgatgttcatctcggagctgaagagcatcgcagag
aaggcctctgggtctgaggcatccagctctcccacgtctgagcccgtctccatccccatc
gtcctgtgtgcagacctcaactctctgcctgattcaggcgtggtggagtatttgagcaat
ggcggtgtggcggagaatcacaaggacttcaaagagctgcggtacaacgaatgcctgact
aacttcagctgcaacgggaagaacgggaactctgagggcagcatcacacacggcttccag
ctgaagagcgcgtacgacaacaacctgatgccttacaccaattacacctacgacttcaag
ggcgtgattgactacattttctattccaagactcacatgagcgttctgggtgctctgggc
cccctggagacccagtggctgacggacaacagcatcacgggctgcccccacccccacatc
ccctccgaccacttctccctgctggctcagctggagctgcacccgcccctctcccccctc
aacgggctgcacctgcctgtgcacaggtag
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