Conger conger (European conger): 133142003
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Entry
133142003 CDS
T10633
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccog03021
]
133142003 (chd1)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133142003 (chd1)
Transcription machinery [BR:
ccog03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133142003 (chd1)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133142003 (chd1)
SLIK complex
133142003 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
CHDCT2
Motif
Other DBs
NCBI-GeneID:
133142003
NCBI-ProteinID:
XP_061118892
LinkDB
All DBs
Position
12:complement(19429684..19464620)
Genome browser
AA seq
1823 aa
AA seq
DB search
MDARSEDESVSNSSAESSNSDDESGSGSGSGSGSGSSSSSSSSSSQSGSSDSGSGSDSGS
QSDSDSEKSKKSQPESKPAKIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQPQNQQ
QSSSDSGSDEDSSSSDDSDDDSSSQTKRKRKHRGSDSGSDSGSGSGSDSSSGSGSGSDSS
AAAENSDETASDYEPSHKVKSRKPPSKATVRNGKKGKAQRKKAPGSGSSSSDDEYDKSKM
SGPRRQATVNVSYKEDEEMKTDSDDLVEVCGEDVPQPEEDEFETLERVMEMRIGKRGATG
GTTTVYAVEADGDPNASFTPHKDPSEQQYLIKWKGWSHIHNTWETEESLKQQNVKGMKKL
ENFKKKEQDKRKWLKASSPEDVEYYNCQQELMDDLHSQYQIVERIIGHSNQKSAAGYPDY
LCKWQGLSYSECSWEDGALLSRKFQKCIDDYMSRNQSKTIPSRDCKVLKQRPRFVQVKKQ
PPYIGGEGLELRDYQQDSLNWMAHSWCKGNSCILADEMGLGKTIQTICFLSYLFNEHQLY
GPFLLVVPLSTLTSWQREIQLWAPQMNVVVYLGDISSRGMIRTHEWMHPQNKRLKFNILL
TTYEILLKDKSFLGNVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFHSWEMFELDHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKV
EQILRVEMSAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPDE
NEFYNKAEALQHLIRSSGKLILLDKLLLRLKERGHRVLIFSQMVRMLDILAEYLKSRQFL
FQRLDGSIKGEMRKQALDHFNAENSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKRQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHT
GSAPSSSTPFNKEELSAILKFGAEELFKEQEGEELEPQEMDIDEILKRAETRENDPGPST
VGEELLSQFKVANFSTMEDEEMDMDSDRNHRGWDHIIPEEQRRRMEEEERQKELEEIYLL
PRMRNCAKQINFNGNEGRRSRNRRYSGSDSDSVSDRKRPKKRGRPRTIPRENIKGFSDAE
IRRFIKSYKKFGGPLERLDAIARDAELMEKSEYDLKRLAETVHNGCIKTLRENPCGPEKT
SGKAGGRRGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPADPEDRKRYTIPCHSKA
AHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLHLTHKLLPDDPDKKPQAKQLQTRA
DYLIKLLSRDLAKKEAQRQAGTASSRKRKPRNKKNKMVKPAKVEETVKSESSPTPSEKSS
EEEEDEEEEEEKEEEKEVVPVKTPSRRAKVERAPKEPEEEPEPEVVPKKEPEEREIKEKE
IKKEGKKEKKEEVRETKEKKEAKEKKEPKPLEPAYKKEDIKEEKITEVKVEIREKSKKAG
DTPVHITAGGDNVPVCEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHT
RQCLIKIGDHITECLKEYSNPDQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQEN
AQAADHNTSTVNTTHSFKHADVERLKDNSHHDDSSRDSYSSDRHHSSRYSEHGKDRHAPD
PYRKSSDSRKRPYPSFSNGKDHRERDHYRSERPDSRYYSDKHRKMDDLRSSRDHRMDGST
KDRSHSDHRAGSDYSHHKSSRDYRYHSDWQPDHRATGSGPRSPRDQRSPYDSRSPLGHRS
RSPFEYSSDHKSTPEQVWCSRKT
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcgcagtgaggacgaaagcgtgagcaacagcagtgcggagtccagtaactct
gacgatgagtccgggtccgggtcgggttctggctccgggtcgggctccagctccagcagc
agcagcagcagcagccagtcgggaagcagcgactcggggagtgggtcggactccggcagc
cagtcggactctgactcggagaagtccaagaagagccagccagagagcaagcccgccaag
atcgacggagcggagttctggaaatcgaaccccagtattctggctgtgcagcggtcggct
atgctcaggaaacagcagctccagcagcagcagcagcagcaacagccacagaaccagcag
cagagctcttctgacagtggctcagatgaggactcgtccagcagcgatgactcagacgat
gactcctccagtcagacgaagaggaaacggaagcacaggggatccgactcgggatctgat
tccgggtcagggtccggttccgattccagttcggggtccgggtctgggtcggactcctca
gccgcagcggagaactctgatgagacggcctctgactacgagcccagtcacaaagtcaag
agccgcaagcccccgagcaaggccaccgtcagaaacgggaagaagggcaaggcccagcgg
aagaaggccccggggtcgggctcgtcctcctccgacgacgagtacgacaagtccaagatg
tccggcccgcggcgccaggccaccgtcaacgtgagctacaaggaggacgaggagatgaag
acggactcggacgacctggtggaggtgtgcggggaggacgtgccccagcccgaggaggac
gagtttgagaccctggagagggtgatggagatgaggatcgggaagaggggagccacgggg
ggcaccacgacggtgtacgcggtggaggcggacggcgatcccaacgccagcttcacgccg
cacaaggaccccagcgagcaacagtacctgatcaagtggaaggggtggtcccacatccac
aacacctgggagaccgaggagtccctcaagcagcagaacgtcaagggcatgaaaaagctg
gagaacttcaagaaaaaggagcaggataagaggaaatggctaaaagcttcttcccctgag
gatgtagaatactataactgtcaacaggaactaatggatgacctgcactcgcaatatcaa
atagtggaaagaataatcggtcattcgaaccagaagtcggccgcgggttacccagactac
ttgtgcaagtggcagggtctgtcctactccgagtgcagctgggaggatggggcgctcctt
tccagaaagttccagaaatgcatcgacgactacatgagcaggaaccaatccaaaaccatc
ccatcgcgggactgcaaggtgttgaagcagaggccgcggtttgtgcaagtgaagaagcag
ccgccgtacatcggtggcgaaggcctggaactgagagattaccagcaggacagcttaaac
tggatggctcactcctggtgcaagggaaacagctgtatcctggctgacgagatgggcctg
gggaagaccatccagaccatctgcttcctcagctacctgttcaacgagcaccagctctac
gggcccttcctgctggtggtgcccctctctaccctcacctcctggcagagggagatccag
ctgtgggccccccagatgaacgtggtggtttacctgggcgacatcagcagccgcggcatg
atcagaacacacgaatggatgcacccacagaacaagagactgaagttcaacatcctgcta
acaacgtatgaaatcctgctcaaagataagtcattcctgggaaatgtgaactgggccttc
attggtgtggacgaggctcaccggctgaagaacgatgactccctcctctacaagaccatg
atcgacttcaaatccaaccaccgcctgctgatcaccggcacgccactgcagaactcgctg
aaggagctctggtccctgctgcacttcatcatgcccgagaagttccactcctgggagatg
tttgagctggaccacgggaagggccgggactcgggctacaccagcctgcacaaggagctg
gagcccttcctcctgcggcgggtgaagaaggacgtggagaagtcgctccccgccaaggtg
gagcagatcctccgggtggagatgagcgccatacagaagcagtactacaagtggatcttg
acccggaactacaaggccctcagcaaaggcaccaaaggaagcacgtctggcttcctcaac
atcatgatggagctgaagaagtgctgcaaccactgctacctcatcaaaccgcccgacgaa
aacgagttctacaacaaggccgaggcactgcagcacctgatccggagcagcgggaagctg
atcctgctggataagctgctcctgcggctgaaggagcggggtcaccgcgtgctgatcttc
tcccagatggtccgcatgctggacatcctggccgagtacctgaagagccggcagttcctc
ttccagagattggatggctctataaaaggagagatgaggaagcaagctttggatcatttt
aatgctgagaactctgaagacttctgcttcctgctctccacgcgagccgggggtctgggc
atcaacctggcctccgccgacacggtcgtcatcttcgactccgactggaacccccagaac
gacctgcaggcccaggcccgggcacacaggatcggccagaagagacaggtgaacatctac
aggctagtgacaaaggggtcggtggaggaagacatcatcgaaagggcgaaaaagaagatg
gtgctcgaccacttggtcatccagcgaatggacaccaccgggaagacagtcctccacact
ggctctgccccctccagttccaccccgttcaacaaggaggagctgtctgccatcctcaag
ttcggtgctgaagagcttttcaaagagcaagaaggcgaggagctggagcctcaggaaatg
gatattgatgagatcttgaagcgagctgaaaccagggagaacgacccaggtccatcgact
gttggggaggagcttctctctcagtttaaggtggcaaacttctctacgatggaggacgag
gagatggacatggactcggaccgtaaccatcgcggctgggaccatatcatcccagaggag
cagaggaggaggatggaggaggaggagcggcagaaggagctggaggagatttacctcctg
ccccgtatgaggaactgtgccaaacagataaactttaacgggaatgaaggccggcgcagc
agaaaccggcgctattccgggtccgacagcgactccgtctcggaccgcaaacggcccaaa
aaacgggggaggccacggaccatcccccgggagaacatcaaggggttcagcgatgccgag
atccgcagattcataaagagctataagaagtttggcgggccactggaaaggctggacgcc
atcgctcgtgacgcggagctcatggaaaaatccgagtacgacctcaagaggctggcggaa
acggtacacaatggctgcatcaaaacgctgcgggaaaacccctgcggacctgaaaagacc
tcaggtaaagcaggaggtcgccgtgggaaggtgaagggtcccacgttcaggatttcggga
gtccaggtgaacgccaagctggtgatctcacacgaagaggagctggcccctcttcacaag
tccattcccgctgaccccgaagacaggaagaggtacaccatcccgtgccactcgaaggcg
gctcatttcgacatcgactgggggaaagaggacgactcaaacctgctgatcgggatctac
gagtatggctacggcagctgggagatgatcaaaatggaccccgacctacacctcacacac
aagctcctgccagatgacccggataagaagccccaggccaagcagctgcagaccagagcg
gactacctcataaaattattgagccgggatctggccaaaaaggaggcacagaggcaggcg
ggaacggccagttcccgcaagaggaaacccaggaataagaagaacaagatggtgaaaccg
gccaaggtggaggagacggtgaagagcgagtcctcgcccacgccgtcggagaagagctcc
gaggaagaggaggatgaggaggaggaggaggagaaggaggaagagaaggaggtggtcccg
gtgaagactcccagccggagagcgaaggtggagcgggcgcccaaggagccggaggaggaa
cccgagcctgaggtggtgcccaagaaggagcctgaagaaagagagataaaggagaaggag
atcaaaaaagagggcaagaaggagaaaaaggaggaggtccgggagaccaaggagaagaag
gaagcgaaggagaagaaggagcccaagcctttggaacctgcctacaagaaggaggacatc
aaggaggagaagataaccgaggtgaaggttgagattcgggagaagtcgaaaaaggcaggc
gatactcctgtccacatcacggccggcggagacaacgttcccgtgtgtgaggagtcggag
gagctggatcagaagaccttcagcgtgtgtaaggagcggatgcgtccggtgaaggcggct
ctgaagcagctggaccggccggagaagggcctgtcggagcgggagcagctggaacacacc
aggcagtgcctcatcaagatcggagaccacatcacagagtgtctgaaggagtactccaac
cctgaccagatcaagcagtggaggaagaatctgtggatatttgtttcgaagttcactgaa
tttgacgcaaggaagttgcacaagttgtacaagcacgcgattaagaagcgacaggaaaac
gctcaggcagcggaccataacactagtactgtaaatacaactcacagctttaaacacgca
gatgtggagaggttaaaggacaactcccatcatgacgacagcagcagagacagctacagc
tcggacagacaccactcgtcccgctactcggagcacgggaaggaccggcacgcccctgac
ccctacaggaagagcagcgactcccgaaagaggccgtacccctccttcagcaacggcaaa
gaccaccgggaacgggaccactaccgatcggagaggcccgacagcaggtattacagcgac
aagcacaggaagatggacgacctgcggtcgagtcgcgaccacaggatggacggcagcacc
aaggaccgctcgcactcggaccaccgggccggctccgactactcgcaccacaagtcctcc
cgcgattaccgctaccattcggactggcagccggaccaccgggccacaggcagcgggccg
cggtcgccccgggaccagcgctccccctacgactcgcgctcgcccctgggacaccggtca
cggtcgcccttcgagtattcgtccgaccacaagagcaccccggagcaggtgtggtgcagc
cgcaagacataa
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integrated database retrieval system
