Conger conger (European conger): 133142023
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Entry
133142023 CDS
T10633
Name
(RefSeq) LOW QUALITY PROTEIN: cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ccog Conger conger (European conger)
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133142023
03041 Spliceosome [BR:
ccog03041
]
133142023
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133142023
Spliceosome [BR:
ccog03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133142023
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Mycophage_Gp42
Motif
Other DBs
NCBI-GeneID:
133142023
NCBI-ProteinID:
XP_061118925
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Position
12:46997079..47011235
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AA seq
386 aa
AA seq
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MMDDEQPKTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
AASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHXFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
TTYESNTKHLSFDEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFSPFGQIMEIRVFPDKG
YSFIRFNSHEGAAHAIVSVNGTSIEGHVVKCYWGKETTDMVNPIQQVQVPQQSKVGFATQ
PYGQWGQWYGSAQQIGQYVPNGWQVPAYSVYGQAWNQQGFNHIQAGGGWTGVSAVSNGGV
VEPAQGVNGSVLANQSGLGATGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaacagcccaagactctgtatgtggggaacctgtcccgggatgtgacg
gaggctctcatcctgcagctgttcagtcagatcggcccctgcaagagctgtaaaatgatc
gtagatacggcaggtaatgacccttactgcttcgtggagttctacgagcataggcatgcc
gcagcctctctggcggccatgaacgggcgtaagataatgggtaaggaggtcaaggtgaac
tgggctacaactccgagcagtcagaaaaaagacacaagtaatcacttccacngtttcgtc
ggagacctcagcccggagatcaccaccgatgacatcaaagcagcgttcgcgccgtttggc
aggatatccgatgcccgcgtggtgaaggacatggcgactgggaagtccaaaggctacggc
ttcgtgtccttcttcaacaaatgggatgcagagaacgccattcagcagatgggaggccag
tggctggggggcaggcagatccggaccaactgggccacaagaaagccccccgctcccaaa
accacctacgagagcaacaccaagcacctgtccttcgacgaggtggtgaaccagtccagc
cccagcaactgcacggtgtactgcgggggggtgaccaccggactcacagagcaactgatg
agacagaccttctccccctttggacaaatcatggaaattagagttttccccgacaaaggc
tattcattcatcagatttaactcccacgagggggcggcccacgccatcgtgtcggtgaac
gggacctcgatagaaggtcacgtggtgaagtgctactggggcaaggagaccacggacatg
gtcaacccgattcagcaggtgcaggtaccccagcagagtaaagtgggcttcgccacgcag
ccttacggccagtggggccagtggtacggcagcgcgcagcagattggccagtacgtgccc
aacggctggcaggtccccgcctacagcgtgtacgggcaggcctggaaccagcagggcttc
aatcacatacaggcgggcggtggctggacaggcgtgagcgcggtcagtaatggcggagtg
gtggagccggcccagggcgtgaatgggagcgttctagctaaccagtctggcctgggggcc
acaggataccccacacactga
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