Conger conger (European conger): 133142239
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Entry
133142239 CDS
T10633
Name
(RefSeq) syndecan-1-like
KO
K06257
syndecan 1
Organism
ccog Conger conger (European conger)
Pathway
ccog04512
ECM-receptor interaction
ccog04514
Cell adhesion molecule (CAM) interaction
ccog04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133142239
04514 Cell adhesion molecule (CAM) interaction
133142239
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133142239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133142239
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ccog04090
]
133142239
00535 Proteoglycans [BR:
ccog00535
]
133142239
Membrane trafficking [BR:
ccog04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
133142239
CD molecules [BR:
ccog04090
]
Proteins
133142239
Proteoglycans [BR:
ccog00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
133142239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
133142239
NCBI-ProteinID:
XP_061119323
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All DBs
Position
1:complement(86393232..86413329)
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AA seq
427 aa
AA seq
DB search
MRMQVTTLLLVCLGVWIHTAESGSGADSSTYPEDQDTSGDDLEISGSGSGDDGDGTVDLP
MATPTTAAPAANESAPVAVTTEGEGAAVEVAAEPTSPMATEVPPTTTPTPTTTAAVMSST
DGADATDPPANPPVASDVPSTTDAPVNPPVAFDVTSTTDAPTSPSSSTGTAGTTAAPDQV
PTTAVPWELPQDPLRETTPASPVTPEEATTPSAPEEEEESGPSETTESLLTTQSSPTTAV
PPVVMDTGVKVTAAAPATTPVPVQEEEEAEEERPAPTENADLLPDTDPDDMASGDDSVPA
STAAPRSTESPGLAEPLIPVEEEVIKPGFRSNVNEAIPDSDSDSDLIIIDPSVPQEAHAD
NQSLLERKEVLGGVIAGGVVGLAFAIMLVALMVYRMKKKDEGSYALDEHKHPNGGYQKAR
TQEEFLA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgcaagtaactaccttgctacttgtctgcttgggcgtttggattcatacagcg
gaatcggggtccggtgcggacagcagcacatatccggaggaccaggacacgtccggagat
gacctggagatctcgggatccggatcgggagatgacggggacggcacggtggacttgccc
atggccacgcccacgacggcggctccggcggccaatgagagcgcgccggttgccgtgacg
acggaaggggaaggcgctgcagtcgaggtcgcggcggagcctacgtcgccgatggcgacc
gaggtcccccccaccaccacccccacccccaccaccaccgcggccgtcatgagctccacc
gatggggctgatgccaccgacccgcccgccaaccctccagtggcctccgacgtcccttcc
accaccgacgcgcccgtcaaccctcccgtggccttcgacgtcacctccaccaccgacgcc
cccaccagcccctcgtcctccaccggaacggccggcaccacggccgcgcccgaccaggtc
cccaccaccgccgttccttgggagctgccccaggaccccctgcgggagaccaccccagcc
agtcccgtcacgcctgaggaggcgaccacgccctccgcccctgaggaggaggaggagtcc
ggcccttccgagaccacggagtccctcctcaccacccagagttcccccaccaccgctgtg
ccccccgtcgtcatggacaccggcgtcaaggttaccgccgcggccccggccacgaccccc
gttcccgtccaggaggaggaggaggccgaggaggaaaggcccgcccccaccgagaacgcc
gacctgctcccggacaccgatccggacgacatggcgtcgggcgatgactccgtccctgcc
tccaccgctgcgccgcggagcacggagtcccccggactcgccgagcccctgatccctgtg
gaggaggaggtcatcaagccagggttcagatccaacgtcaacgaagcgatcccagactcc
gactccgactccgacctgatcatcattgaccccagtgtgccccaggaagcccacgctgat
aaccagagtctcctggagaggaaggaggtcctcggaggtgtgatcgccgggggcgtggtg
gggctggccttcgccatcatgctggtggcgctcatggtgtacaggatgaagaagaaggac
gagggcagctacgcgctggacgagcacaagcaccccaacgggggctaccagaaagcccgg
acacaggaagagtttctggcgtag
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