Conger conger (European conger): 133142332
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Entry
133142332 CDS
T10633
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ccog Conger conger (European conger)
Pathway
ccog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133142332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133142332
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133142332
mRNA degradation factors
5'-3' decay
Lsm complex
133142332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF6319
DUF5321
Motif
Other DBs
NCBI-GeneID:
133142332
NCBI-ProteinID:
XP_061119479
LinkDB
All DBs
Position
12:complement(30541470..30543671)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFIVRGENVVLLGEIDLEKECDTVLKQVSIEEILEEQRAQQQAKLEAEKAKLQALKER
GLSVPRADVLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatgccaggaacagcaagcctcatcgaggatatcgataagaagcaccttgtt
ttactccgagacggcagaacgttgattggatttctgagaagcatcgaccagtttgcaaat
ctggttttacatcaaaccgtggaaagaatacacgtcggcaagaaatatggcgacattcca
agaggaatattcatagtccgtggagagaacgtcgttcttctgggagagatcgacctggag
aaggagtgtgacaccgttttaaagcaagtgtccattgaagagatcctggaggaacagcga
gcacagcagcaagccaagctggaggcagagaaagccaagctgcaggcgctgaaagagaga
ggactgtcggttcccagggcagacgtattggatgaatactga
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