Conger conger (European conger): 133142359
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Entry
133142359 CDS
T10633
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccog Conger conger (European conger)
Pathway
ccog04137
Mitophagy - animal
ccog04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133142359
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133142359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133142359
03009 Ribosome biogenesis [BR:
ccog03009
]
133142359
04131 Membrane trafficking [BR:
ccog04131
]
133142359
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccog04147
]
133142359
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133142359
Ribosome biogenesis [BR:
ccog03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133142359
Membrane trafficking [BR:
ccog04131
]
SNARE
SNARE associated proteins
Others
133142359
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133142359
Exosome [BR:
ccog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133142359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
133142359
NCBI-ProteinID:
XP_061119510
LinkDB
All DBs
Position
12:complement(38018377..38029537)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRESVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPLD
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNAGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSTPGG
AGPSQGPTGGSGGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggtggagaatccaaaaatgatgacctttctactgcaattttaaaacaaaag
aatagacccaaccggttgattgtggatgaatccatcaatgaagataatagtgtggtctct
ctttctcaggccaagatggacgagctgcagctcttcaggggagacacggtgctgatgaag
gggaagaagaggagggagtcggtgtgcattgtgctctccgacgacacttgttctgacgag
aaagtgcgcatgaacagggttgtccgcaacaacctgagggtgcgcctgggagatgttatc
agcatccagccgtgtcccgatgtgaaatatgggaagcgcattcacgttcttccccttgat
gacaccgtggaggggatcacagggaacctgtttgaggtttatctcaagccatacttcttg
gaagcctacaggcctataaggaaaggagatattttcctggtcagaggtgggatgcgagct
gttgaattcaaagttgtggagacagaccccagcccctactgtatagtggctccagacaca
gtcatccactgtgagggagagcccataaaacgtgaggatgaagaggagtcactgaatgag
gttggctatgacgatatcggaggagtccggaagcagctggcccagatcaaagagatggtg
gaactacccctgagacacccagctctgttcaaagccattggtgtgaagcctccacgtggc
atcctgctgtatggacctcctggaacaggaaagacgctgatcgctcgagcagtggccaat
gaaaccggagctttcttcttcctcatcaacggccctgaaattatgagtaaacttgctgga
gagtcagagagcaatctgagaaaagcctttgaagaagctgaaaagaatgctcctgccatt
atctttattgatgagcttgatgctatcgcaccaaaaagagaaaagactcacggagaggtg
gagaggcgcattgtctcccagctgctcactctcatggatgggctgaagcagcgggcgcat
gtgatcgtcatggcagctacgaaccgacccaacagcatcgacccagccctccggcgattt
ggccgctttgacagggaggtggacattggcattcctgatgcaacagggcggctggaaatc
ctccagatccatactaagaatatgaaactggctgacgatgttgatcttgagcaggtcgcc
aacgagactcacggccacgtgggagcagatctggcagctctgtgctcagaagctgctctc
caggccatcaggaagaagatggacctgatcgacctggaggacgagaccatcgatgccgag
gtcatgaactccctggctgtcaccatggacgactttaggtgggccctgagtcagagtaac
ccttcagccctgcgagagactgtggtggaagtgcccaatatcacctgggaggatattggt
ggtctggaggacgtcaagagagaactgcaggagcttgtacagtatcctgtggaacatcca
gacaaattcctgaagttcggaatgaccccttctaagggggtgctgttctacggaccgcct
ggctgtggtaaaacgctcttggcaaaggccatcgccaacgagtgtcaggccaacttcatc
tccatcaaaggcccagagctgctcaccatgtggtttggagaatctgaagccaacgtccgg
gaaatctttgacaaggcccgccaggctgccccgtgcgtgctgttcttcgacgagctggac
tccatcgccaaagctcgcggcgggaacgccggggacgggggcggagccgccgaccgcgtc
atcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttcatcatc
ggcgccaccaacaggccggacatcatcgaccccgccatcctgcgccccggccgcctcgac
cagctcatctacatccccctgcccgacgagaagtcccgcatgtccatcctgaaggccaac
ctcaggaagtcccccatctctaaggatgtggacttggatttcctggctaaaatgaccaat
ggcttctctggagcggacttgactgagatctgccagcgagcctgcaagttggccatcaga
gagtccattgagaatgagatcagacgggagcgagagaggcagaccaatccctcagcaatg
gaggttgaagaggatgaccctgttccagagatccgtaaggaccactttgaggaggccatg
cgctttgcccgccgctctgtcagcgataacgatatccgcaaatatgaaatgttcgcccag
acactgcagcagagccgagggtttggcagcttcagattcccctccagcactccgggtggc
gctggaccaagccaaggacctacagggggcagcggtggcccagtcttcaacgaggacaat
gatgacgacctctatggttaa
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