Clostridium cochlearium: SAMEA4530647_0007
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Entry
SAMEA4530647_0007 CDS
T06756
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoh03032
]
SAMEA4530647_0007 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_0007 (gyrA_1)
Enzymes [BR:
ccoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMEA4530647_0007 (gyrA_1)
DNA replication proteins [BR:
ccoh03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4530647_0007 (gyrA_1)
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMEA4530647_0007 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
SNV62856
LinkDB
All DBs
Position
1:6073..8505
Genome browser
AA seq
810 aa
AA seq
DB search
MNNNEGKVLEVDIKQEMKKCYIDYAMSVIVGRALPDVRDGLKPVHRRILYSMHELGLNPE
KSYRKCARIVGDVLGKYHPHGDSSVYDALVRMAQDFSIRYTLVDGHGNFGSVDGDSAAAM
RYTEAKMSKIATEMLRDINKNTVDFTPNFDGSEKEPSVIPSRFPNLLVNGSSGIAVGMAT
NIPPHNLCEVIDGINMLIDNPDTTILELMSKIKGPDFPTAGIIMGKSGIRSAYETGRGKV
IMRAKAEIEEEKNRYRIIVTELPYQVNKAKLIESMAELVKDKKIDGISDIRDESDREGMR
IVIEIKRDSNPNVVLNQLYKHTKMQDTFGVIMIALVDNEPKVLNLKEILVNYIEFQKEII
RRRTKFDLDKALARAHILEGLRIALDHIDEVISLIRASKNAEEARNELINKFSLTEKQAQ
AILDMRLQRLTGLERDKIEEEYNQLMETIKYLRDILNNEDLVLEIIKEELNEIKNKYGDE
RRTQIELNVNEISIEDLIEEEEVVVTLTNSGYIKRISSSAYSSQKRGGKGIQAITTKEDD
FVEKVFVTSTHSDLLFFTNVGKVYKLKAYEIPEAGRTAKGTNIVNLLPVDANEYVREVIA
LKEDLQDGYLIMGTKQGLIKKTSLDQFKNIRRNGLIAINLKDEDELLKVKITRGDAEIII
ITQNGYAIRFSEKDVRPMGRNSMGVKAINLREDDIAVSMDIVVEDQYVLTVTENGFGKRT
SVSEYNLQNRNGKGLITHKVTDKTGKVVSARITKDNDELMLINSSNIAIRICVSDVSITN
RNAMGVTLMRTNEEEKILAIAKINSDEESE
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaataacaatgagggcaaagttttagaagttgatataaaacaggaaatgaaaaaatgt
tatatagattatgctatgagcgttattgtaggaagagctcttccagatgtaagggatgga
ttaaagccagttcataggagaatattatattccatgcacgaattaggattgaatccagaa
aaatcttacagaaaatgtgccagaatagtaggggacgttttaggtaagtatcacccacat
ggtgattcttcagtttatgatgctcttgttagaatggctcaggatttctctataaggtat
acacttgtagatggtcacggtaactttggttcagtagacggagattctgctgcagctatg
aggtatactgaagctaagatgagtaaaattgccactgaaatgttaagagatataaataaa
aatactgtagactttacacctaactttgatgggtctgagaaagagccatcagttataccg
tctagatttccgaatttacttgtaaatggatcatcaggtatagcggtaggaatggctact
aatataccacctcataatttatgtgaggttatagatggcataaatatgctaatagataat
ccagatacaactatcttagaattaatgtcaaagataaaaggtccagattttccaacagcg
ggaattattatgggcaaatcaggaataagaagtgcctatgaaaccggtagaggaaaagtt
attatgagagctaaagctgaaattgaagaagaaaaaaatagatataggataatagtgact
gagctaccataccaagtaaataaagcaaaacttatagaaagtatggcagaattggttaaa
gataaaaaaatagatggaatatcagatataagagatgaatctgatagagaaggtatgaga
atagtaatagagataaaaagggattcaaatcctaatgtggttttaaatcagttatacaaa
catacaaaaatgcaagatacttttggagttataatgattgcattagttgataatgaacca
aaagttttaaatctaaaagaaatattagtaaattatatagaatttcaaaaagaaatcata
agaagaagaactaaattcgatttagataaagctttagcaagagcacatatactagaggga
ctgagaatagctttagatcacatagatgaagttataagtttaataagagcatctaaaaat
gctgaagaagctagaaatgaattaattaataaattttctcttacagaaaaacaagctcaa
gcaatattagatatgagacttcaaagattaactggattagaaagagataaaatagaagaa
gagtacaatcaacttatggaaactataaagtatttaagagatattttaaataatgaagat
ctagttctagaaataattaaagaagaacttaatgaaataaaaaataaatatggtgatgag
agaagaactcaaatcgaattaaatgtaaatgaaataagtatagaagacttaattgaggaa
gaagaagttgtagttacccttacaaattctggatatataaaaagaatatcttccagtgct
tattcctcacaaaagagaggcggaaaaggaattcaagctataacaacaaaagaagatgac
tttgtggaaaaagtatttgtaacttcaactcatagtgatttattattctttacaaatgta
ggtaaggtttataaattaaaagcttatgaaataccagaggcaggaagaactgctaaaggt
actaacatagtaaatttacttccagttgatgctaatgagtatgtaagagaagtaattgct
ttaaaagaagatctacaagatggatatttaataatgggaactaagcaaggattaattaag
aaaacatcattagatcagttcaaaaatataagaagaaatggactaattgcaataaaccta
aaagatgaagatgaattattaaaggtaaaaataactagaggagatgctgaaataataata
attactcaaaatggctatgcaataagatttagtgaaaaagatgtaagacctatgggaaga
aattctatgggtgttaaggctataaatttaagagaagatgatatagcagtaagtatggat
atagtagtagaagatcaatatgttttaactgttactgaaaatggatttggcaaaagaact
tcggtttcagaatataatttacaaaatagaaatggtaaaggacttataactcataaagta
acagataagacaggcaaagtagtttcagctagaataacaaaagataatgatgagttaatg
cttataaatagtagtaatatagctataagaatttgtgtatcagacgtaagtataacaaat
agaaatgctatgggagttactttaatgagaactaatgaagaagaaaaaatattagccatt
gctaaaataaattcagacgaagaatctgaataa
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