Clostridium cochlearium: SAMEA4530647_0059
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Entry
SAMEA4530647_0059 CDS
T06756
Symbol
mecB_1
Name
(GenBank) negative regulator of genetic competence mecB
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ccoh03110
]
SAMEA4530647_0059 (mecB_1)
Chaperones and folding catalysts [BR:
ccoh03110
]
Heat shock proteins
HSP100
SAMEA4530647_0059 (mecB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Sigma54_activat
AAA_16
AAA_22
TniB
AAA_14
IstB_IS21
nSTAND3
AAA_7
Zeta_toxin
UVR
RuvB_N
RsgA_GTPase
bpMoxR
AAA_3
NACHT
nSTAND_NTPase5
PhoH
ResIII
DUF4428
NBD_SMAX1
KDM6_GATAL
Motif
Other DBs
NCBI-ProteinID:
SNV63333
LinkDB
All DBs
Position
1:49099..51393
Genome browser
AA seq
764 aa
AA seq
DB search
MKLCSICNKNVATIFTTRFKDEKPQIVGICVECAKKMNVQPLNQIIEAAGVTPEDMETYA
EQMNKLLENMDINELLSNDLFSNIINNMSEMNASQMKQDFIDKNNKNHNDEKNNISQSKS
NVKTRSKFMNKKKNLDKYAINLNDKAKNNKIDVVVGRDKELERIIQILNRRNKNNPILIG
EPGVGKTAIAEGLAVKIIEKNVPIKLLNKEIYLLDLTSVVAGTQFRGQFEGRMKAIVDEV
TESENVILVIDEVHNIIGAGEAQGGALNAANILKPALARGDIQVIGATTLEEYRKYIEKD
SALERRFQPILVEEPSVDETIEILNRIKVYYEEYHNVKITKDVVEEAVKLSKRYITDRYL
PDKAIDVIDEASSRANLRNKNLMELKIAKEELEKLQSKMLDAANNGDYEKAAQYKTEEYK
LKDKVQQLEKKSKVELSIDDIAYVIEAWTKIPVQKVREKEVEKLLNLEQRLHKRVIGQDR
AVRKLSRTIRRNRLGFKSKKRPASFIFVGPTGVGKTELVKALACELFGDEDALIRIDMSE
YMEKHTASKLIGSPPGYIGYDEGGQLTEKIRRKPYSVVLLDEIEKAHPDIFNMLLQVLED
GRLTDNQGRTVFFDNSVIIMTSNLGTNFKESTIGFGNTNSIQIENSIKDALKETFKPEFI
NRIDEIVVFEKLNKEELYDIIDIMFNDVSEDLNEKNIKVHFTKEVKDFILRIGYSEKYGA
RELRRAIQRYIEDEISEEYFRGKVKEGTNIEVDVYEDKIYIKNI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatgttctatatgtaataaaaatgttgctactatttttacaactagatttaaa
gatgagaaacctcaaattgtaggaatatgcgttgaatgtgctaaaaagatgaatgtacag
cctttaaaccagataattgaagcagcaggagtaactccagaagatatggaaacttatgct
gaacaaatgaataaattattagaaaatatggacataaatgaacttttaagtaatgattta
ttttctaatattatcaataatatgagtgaaatgaatgcgtctcaaatgaaacaggatttt
atagataagaataataaaaatcataatgatgaaaaaaataatatttcacaaagtaaatct
aatgtaaaaacaagatctaagtttatgaataagaaaaaaaatctagataaatatgcaata
aatttgaatgataaggcaaagaataataagatagatgttgtagtggggagagataaagaa
ttagaaaggataattcaaatattaaatagaaggaataaaaataatcctatacttattggg
gaacctggagttggtaagacagctatagcagaggggctagcggtaaaaataatagaaaaa
aacgttcctataaaattattaaataaggaaatatatttattagatctaacttctgtagta
gcaggcactcaatttaggggacaatttgaaggacgtatgaaagctatagtagatgaagta
acggagagtgaaaatgttatattagttatagatgaagttcataatattataggagcaggg
gaagctcaaggtggagctcttaatgctgctaatatattaaaacctgctttagctagagga
gacattcaagttattggagctacaactttggaggaatatagaaaatatatagaaaaagat
tctgcattggaaagaagattccaaccaatattagttgaagaaccatcagttgatgaaaca
atagaaattttaaatagaataaaagtatactatgaagagtatcataatgttaaaataact
aaggatgttgtagaagaggctgtaaaattatctaaaagatatataacagatagatattta
cctgataaagccatagacgttatagatgaggctagctctagagctaatttaagaaataag
aatttaatggaacttaaaattgcaaaagaagagctagagaaactacaaagtaaaatgtta
gatgcagcaaataatggagattatgagaaagcagctcaatataaaacggaagaatataag
ttaaaagataaagttcaacagttagaaaagaagagtaaagtagaattatcaatagatgat
atagcttatgtaattgaggcatggactaaaataccagttcaaaaggtaagagaaaaagag
gtagaaaaattattaaatttggagcaaagacttcataaaagggtaattggtcaagataga
gcggtacgtaaactctcaaggaccataagaagaaatagattaggattcaagagtaaaaaa
aggccagcttcatttatatttgtaggaccaacaggagttgggaaaacagaacttgttaaa
gctttagcatgtgaattgtttggagatgaagatgctttaataagaatagacatgtcagaa
tatatggaaaagcatacagcttcaaaactcataggatcacctcctggatatattggatat
gatgagggaggacaattaactgaaaaaattagaagaaaaccgtattcagttgttctttta
gatgaaatagaaaaagcacatccagatatatttaatatgcttttacaggtgctagaagat
ggaagattgacagacaatcaaggcagaactgttttttttgataattctgtaataataatg
acatctaatttgggcactaattttaaggaaagtacaataggatttggaaatacaaattca
attcaaattgaaaatagcataaaggatgcgttaaaagagacatttaaaccagaatttata
aataggatagatgaaattgttgtatttgagaaattaaacaaagaagagttatatgatatt
atagatattatgtttaatgatgtttcagaagatttaaatgaaaaaaatataaaagtacat
tttacaaaagaagttaaagattttatattaagaataggatatagtgaaaaatatggtgca
agagagctaagaagagctatacaaaggtatattgaagatgaaatatctgaagaatatttt
agaggcaaggtaaaagaaggaacaaatatagaggtagatgtatatgaagataaaatatat
ataaagaatatatga
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