Clostridium cochlearium: SAMEA4530647_0083
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Entry
SAMEA4530647_0083 CDS
T06756
Symbol
iap
Name
(GenBank) cell wall-associated hydrolase
KO
K21471
peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccoh01002
]
SAMEA4530647_0083 (iap)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
SAMEA4530647_0083 (iap)
Peptidases and inhibitors [BR:
ccoh01002
]
Cysteine peptidases
Family C40
SAMEA4530647_0083 (iap)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SAMEA4530647_0083 (iap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
CC_PcsB
MscS_porin
Filament
ATG14
TMPIT
CCDC22_CC
FPP
ATG17_like
Mce4_CUP1
ADIP
DUF3450
CCDC113_CCDC96_CC
Peptidase_C92
CCDC93_CC
Laminin_II
ATG16
DUF724
DUF1664
APG6_N
AI-2E_transport
GAS
Crescentin
CHAP
DUF4200
PorA
Lebercilin
LRAT
RasGAP_C
OmpH
Vfa1
AAA_13
EzrA
HAUS5
Motif
Other DBs
NCBI-ProteinID:
SNV63538
LinkDB
All DBs
Position
1:73071..74165
Genome browser
AA seq
364 aa
AA seq
DB search
MNKKVVSALVALGLIVSSNITVFAEPLSGSTANYQQRINESRNSLQDVKSKRQKLETDIE
KMDNQIEEIMHKISQTKDKISSTKKEIKKAEKDIAKAEEDIKEEQELFNKRVRAMYMNGV
GSYLDVIVESEGLSDLISKVDSIKRIMDMDKKIISDLNNKRQALEDKKQKLDTDNKKLLA
LQSENESKLSDINKKKREQDTLLAQLKSQERMYASRISENQAQIDAAMRQVNKIRDNVPK
YVPSRGASSLSSDTVVAYASNFLGTPYQWGGNGPNTFDCSGFVKYVYGHFGVSLPRVASD
QQGAGSPVSRDNLQPGDLVFFGSPAHHVGIYVGNNAYMHAPRTGDVVKISPLTRSDYSGA
RRVR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagaaagtagtgtctgcattagtggcattaggattaatagtatctagcaatatt
acagtatttgcagaaccactatcaggaagtacagcaaattatcagcagagaataaatgag
agcagaaattcattacaagatgtaaaaagtaagagacaaaagttagagacagatatagaa
aaaatggataatcaaattgaagaaattatgcataaaatttctcaaacaaaagacaaaatt
tccagtactaaaaaagaaataaaaaaagcagaaaaagatattgcaaaagcagaagaagac
attaaggaagaacaagaactttttaataaaagagttagagcaatgtatatgaatggtgtt
ggaagctatttagacgtaattgtagaatcagaaggactaagtgatttaatttcaaaagta
gattccattaaaagaataatggatatggataagaaaataatttcagatttaaataataaa
agacaagcacttgaagataaaaaacaaaaattggatactgacaataaaaaattattagca
ttacaatcagaaaatgaaagcaaattatctgatataaataaaaagaaaagagagcaagat
actctattagctcaacttaaaagccaagaaagaatgtatgcatcaagaataagtgaaaat
caagctcaaatcgatgcagcaatgagacaagttaacaaaataagggataatgtacctaaa
tatgttccatctagaggagcatcatcattatcatcggatacagttgttgcctatgcatca
aattttttaggaacaccatatcaatgggggggaaatgggccaaacacttttgattgttca
ggttttgtaaaatatgtttatggtcattttggtgtatctttgccaagagtagcatcagat
caacaaggagcaggttcaccagtatctagagataatttacaacctggagatttagtattc
tttggatcacctgcacatcatgttggtatatatgtaggaaacaatgcgtatatgcatgca
cctagaacaggagatgttgttaaaatatcaccattaactagaagtgactatagtggagct
agaagagtacgataa
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