Clostridium cochlearium: SAMEA4530647_0100
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Entry
SAMEA4530647_0100 CDS
T06756
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAMEA4530647_0100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_0100
Enzymes [BR:
ccoh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAMEA4530647_0100
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAMEA4530647_0100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
SNV63784
LinkDB
All DBs
Position
1:90008..90574
Genome browser
AA seq
188 aa
AA seq
DB search
MLGWRELYNNCLNCNKCDLCKNRTYMVFGEGNPRADIMFIGEAPGGDEDKTGRPFIGRAG
QFLTKILLSLDLKRERDYYICNICKCRPENNRNPKEDEIESCIPYLRNQFALIQPKIIVC
LGAIATNRIISDQWRITRDRGKWIKRKGCLITATFHPAAVLRDEGKKQYIIKDLQEVKRA
YESLKKVN
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgttaggttggagagaattatataataattgtttgaattgtaataaatgtgatttatgt
aaaaatagaacttatatggtttttggtgaaggaaatcctagagcagatataatgtttatt
ggtgaagcaccaggaggagacgaggataaaacaggcagaccttttataggtagagcagga
cagtttcttacaaaaatattattgagtttggacttaaaaagagaaagagattattatata
tgtaatatttgtaaatgtaggcctgagaataataggaatcctaaagaagatgaaattgaa
tcttgtataccatatttaagaaatcaatttgcattaatacagcctaaaataatagtatgt
ctaggagctatagcaactaaccgtattataagtgatcaatggaggataactagagataga
ggaaagtggataaaaagaaaaggatgccttattacagctacttttcatccagcagcagta
ctaagagatgaaggaaaaaaacaatatataataaaagatttacaagaagtaaaaagggca
tatgaaagtttgaaaaaagttaactga
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