Clostridium cochlearium: SAMEA4530647_0172
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Entry
SAMEA4530647_0172 CDS
T06756
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
SAMEA4530647_0172
Enzymes [BR:
ccoh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SAMEA4530647_0172
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SAMEA4530647_0172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
DUF1525
Motif
Other DBs
NCBI-ProteinID:
SNV64884
LinkDB
All DBs
Position
1:168166..169200
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AA seq
344 aa
AA seq
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MRSGDIMYLLKRFFASILASILIVIIFCFIILKPSLIGKDNKNNISENKKIEEIKVKVYI
SKDKKIIELDLEDYIKGVVSAEMPAEFHEEALKAQAIAARTYAIPRIKQLGGVSCKNVNG
ADLCDTVHCQAFLTKEVRMKGWSEKKRNEYWNKIENAVESTAGEVLVYKDEIIKGAYYFS
TSSGFTENGQDIFASTEPYLKSVKSQGEEIAPKYKSNKNYSYSEFINIINKKYPKSISNI
KNIKNEVKIKSRTSGGSVKEIVLGKTIITGPTFRKIFNLNSSNFNIKFEKDKINIECKGY
GHGVGMSQWGANVLGKSGENYKDILKHYYTGVEIKKYKEVLKNN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtggagatataatgtatttattaaaaagattttttgcaagtatactagctagt
atacttattgtaattattttttgctttataatattaaaaccatctttaataggaaaagac
aacaaaaataatatatctgaaaataagaagattgaagaaataaaagtaaaagtatatatc
tcaaaagataaaaaaataatagaattagatttggaagattatataaaaggagtagtttca
gctgaaatgcctgctgagtttcatgaggaggccttaaaagctcaagctatagcagcaaga
acttatgctatacctcgtataaaacaattaggtggagtcagttgcaaaaatgtaaatggt
gcagatttatgtgatacagtacactgtcaagcatttttaactaaagaagttagaatgaaa
ggctggtcagagaaaaaaagaaatgaatattggaataagattgaaaatgcagttgaaagt
actgcaggagaagttttggtgtataaagatgaaatcataaaaggagcatattatttctca
actagtagtggatttacggaaaacggccaagatatatttgcatctacagagccatattta
aagagtgtaaaaagtcaaggagaagaaattgcaccaaaatataagagtaataaaaactat
tcgtatagtgaatttataaatataattaataaaaaatatcctaaatctatatcaaatata
aaaaatataaaaaatgaagtaaaaataaagagcagaacttctggaggaagtgtaaaagag
atagtattaggcaaaaccattataacaggtccaacatttagaaaaatttttaatttaaat
tcatcaaattttaatataaaatttgagaaagataagataaatatagaatgcaaaggatat
ggacatggtgtaggtatgagccaatggggagccaatgtattaggaaaatctggtgagaat
tataaggatatattaaaacattattatacaggtgtagaaataaaaaaatataaagaagtt
ttaaaaaataattaa
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