Clostridium cochlearium: SAMEA4530647_0276
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Entry
SAMEA4530647_0276 CDS
T06756
Name
(GenBank) multidrug resistance ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_0276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_0276
Transporters [BR:
ccoh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SAMEA4530647_0276
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
DUF87
SMC_N
AAA_29
AAA_18
MLKL_N
AAA
AAA_21
Motif
Other DBs
NCBI-ProteinID:
SNV66189
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All DBs
Position
1:274251..275990
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AA seq
579 aa
AA seq
DB search
MASLKRIFAYLKPYTFLAIMGPLFMVLEVVMDLYQPRLMQNIIDIGIANRDFTYVLKTGS
LMILIAFLGLFGGVMCIIFSTKAGVNLSTDLRRDLYKKIQKFSGENIDRFQSGKLITILT
NDVNSIQMAIMMMLRVVVRAPLLFIGSIVMVLTSTYELSPILLVVIPLILVVTMVLGKRV
GNLFKKVQEALDRVNTSIQENLSGIRVVKAFVREDHEIEKFEKVNENLTLKNIDAMQLIS
ILIPIVSLIINGAMIATLWIGAVNVNKGTIQIGQIMAFLNYLLQILMSLMMIGMIFIHIT
RAFPSMERAMEILDTEITIKDSIDAKELDNIKGEVEFKDVSYSYNRDDDLVLKNINFKVK
AGSKVGIIGSTGSGKSTLVKLISRLYDVSDGEILIDGVNIKDIKLSSLRKSIGMVPQKAL
LFSGTIEENIKYGKEDATLDEMIKSAKAACAMEFIDKFEGGFNYELTQKATNLSGGQKQR
LSITRALVRHPSILILDDSTSAVDAESEKIIKKSIGEQFSKTTTFMIASKISSIINYNMI
LVLDDGELVGCGTHEQLLKNCDVYKEIYLSQGGKEEQNV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctaaaaagaatatttgcatacttaaagccatatacatttttagctattatg
gggccactttttatggttttagaagtagttatggatttatatcaaccaaggcttatgcaa
aatattatagatataggtatagctaatagagattttacctatgtattaaaaacaggatct
cttatgatattaattgcttttttaggtctttttggtggtgttatgtgtataatattttcc
acaaaagcaggagtaaatttatctacagatttaagaagggatttatacaaaaaaattcaa
aaattttcaggtgaaaatatagatagattccaaagcggtaaattaataactatattaacc
aacgatgtaaacagcatacaaatggcaataatgatgatgcttagagtagttgtaagagca
cctcttttatttataggaagtatagtaatggtacttacaagtacttatgaattatcacca
atacttttggtagttattccattaattcttgtagttacaatggttttgggaaaaagagta
ggaaatttatttaaaaaagttcaagaagctttagatagagtaaatacatctatacaagaa
aatttatctggcataagagttgtaaaagcttttgtaagagaggatcatgaaatagaaaaa
tttgaaaaagtaaatgaaaacttaactttaaaaaatatagatgcaatgcagctaatatct
attttgattccaatagtgagtttaataattaacggagctatgatagcaacgctatggatt
ggagctgttaatgtaaataaaggtacaattcaaataggacagattatggcatttttaaat
tatcttcttcaaattttaatgtctttaatgatgataggtatgatatttatacacataaca
agagcttttccttccatggaaagagctatggagatattagatacagaaataacaataaaa
gatagtattgatgcaaaagaacttgacaatataaaaggagaagtagaatttaaggatgta
tcttatagttataatagagatgatgatttagttcttaagaacataaattttaaggtgaag
gctggaagtaaggtaggcataataggctctactggcagtggtaaatctactttagtaaaa
cttatatcaaggctttatgacgtaagtgatggagaaatattaatagatggagtgaacatt
aaagatataaaactttcttctttaagaaaatctataggtatggtaccacaaaaggcatta
ttgttttctggaactatagaagaaaatattaaatatggtaaagaagatgctacattagat
gaaatgataaagtcagcaaaagcagcttgtgctatggaatttatagataaatttgaaggt
ggatttaattatgaattaacacaaaaggctacaaatctatcaggaggacaaaaacaaaga
ttatctataacaagagcattagtaaggcatccatctatattaattttagatgattcaact
agtgcagtagatgctgagtctgaaaaaattattaaaaaatctataggagagcaatttagt
aaaactactacatttatgattgcttcaaaaatatcctctataattaattacaatatgata
cttgtattagatgatggtgaattagtagggtgtggaactcatgaacaattactaaaaaat
tgtgatgtatataaagaaatttacctttctcaaggtggaaaggaggaacaaaatgtctaa
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