KEGG   Clostridium cochlearium: SAMEA4530647_0473
Entry
SAMEA4530647_0473 CDS       T06756                                 
Symbol
nrdE
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
ccoh  Clostridium cochlearium
Pathway
ccoh00230  Purine metabolism
ccoh00240  Pyrimidine metabolism
ccoh01100  Metabolic pathways
ccoh01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAMEA4530647_0473 (nrdE)
   00240 Pyrimidine metabolism
    SAMEA4530647_0473 (nrdE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoh03400]
    SAMEA4530647_0473 (nrdE)
Enzymes [BR:ccoh01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAMEA4530647_0473 (nrdE)
DNA repair and recombination proteins [BR:ccoh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAMEA4530647_0473 (nrdE)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N OTU1_UBXL
Other DBs
NCBI-ProteinID: SNV68985
LinkDB
Position
1:complement(467504..470659)
AA seq 1051 aa
MELLNNLDYTDSLNKIIRRKFTKELEKNKNLTVFDLFNWKSVDVFLKDHKTGKVLVDMKD
LEFPEHYSQNSCDIIASKYFRKAGVPNKYGYENSMKMVAHRMVNFWATALYKQGLLKTKE
EKQIFYDEMVYALLAQMYAPNSPQWFNTGLCMEYGIKGGPNGTYYYDENLKQVVESTDSY
SRTQASACFILSIEDKLLGPHSISDQYVNETKLFKGGSGTGTNFSTIRAKGEKLSGGGVS
SGLMSFLKGLDRNAGAIKSGGTTRRAAKMVCLDIDHPEILDFITWKSHEEDKVRALGKMG
YDIDIDGEAYETVSGQNSNNSVRFSDFFMKKVKNLAEKLTPVPDDAIELTGRVDSSVNKK
VKVKDLWDSFATSAWMCADPAPQFSDTFNAWHTCPAGEDGNTNAKHNRINSTNPCGEYAF
LDDSSCNLASINIYKFYDDERKNIDLESYLHVVGLVQLALEASIYWGQFPTKDIARKTYM
FRATGLGITNLASLLMVLGYPYDSEKARNISSSLVGLLTGYSYYISSLMAKEIGAFEKFS
INKPYMLRVIKNHARVAGSITSPYEDLNYNPIKVDHKLLENIGFSELSSLLKKSWLKALD
SGEKYGYRNAQVSVIAPTGTISFAMDCAATSIEPFFSHVVYKKLSGGGMMTVTNPVIELS
LKNLGYSEEQIKDILQYVLEKEVVETKEGFKYEKVLDGKIEGAPHLKKEHYAIFDTANKC
GSGKRYIEPMGHVKMVAALTPLISGAISKTVNLPNNATVEDFKKVILTSWELGIKGITLY
RDGCKASQPLNISLSSEKDFKLEDLSYKKLLEKAKELERELQRGVPYSKREKAIGIRNGT
THPAQINDVKIYTTVNRRQNGEISEIYITTDREGTTIMGLLNSLSKALSIMLQYHVPPQD
ISKMLRGQKYEPYGFVQKHPYIKYVSSISDLISKIIDIEVGDFSRCQVKPENYDLNTNAR
NIIFNTKDIIKDQIATNSPNYANGESKNSNNNNNVSNNDLNSDNMYRTVKGNTIAGERLY
CSTCPTCSSTRMVRNGTCLVCLDCGSTTGCS
NT seq 3156 nt   +upstreamnt  +downstreamnt
ttggaactattaaataatttagattacacagattctctcaataaaataattagaagaaaa
ttcacaaaagaattagaaaaaaataaaaatttaactgttttcgatctttttaactggaaa
tcagtagatgtttttctaaaagatcataagacaggaaaagttttagtagatatgaaagat
cttgagtttccagaacactactcgcaaaattcatgtgacataatagcatctaaatatttt
agaaaagcgggcgtccctaataaatatggttatgaaaacagtatgaaaatggtagcacat
agaatggtaaatttttgggctactgctttatataaacaaggattgctaaaaactaaagag
gaaaaacaaatattttatgatgaaatggtatatgctttattagcccaaatgtatgctcca
aactctccacaatggtttaatactggattatgtatggagtatggaatcaaaggaggtcct
aatggcacttattattacgatgaaaacctaaaacaagttgtagaaagcacagattcttat
tctaggactcaagcttctgcttgctttatactttctatagaagacaaacttttaggtcct
cattctatttctgatcaatatgttaatgaaacaaaattatttaaaggaggttcggggaca
gggactaatttctccaccatcagagcaaaaggcgaaaaactttctggtggaggagtttct
tctggacttatgagctttttaaaaggattagatagaaatgctggagccattaaatccggt
ggaactactagaagagccgctaaaatggtttgcttagatatagatcatccagaaatatta
gatttcattacctggaaatctcatgaagaagataaagtaagagctcttggtaaaatgggc
tatgatatagatattgacggagaagcttatgaaactgtttccggtcaaaatagcaataac
tctgtacgattttcagatttttttatgaaaaaagttaaaaatttagctgaaaagttaacc
cccgtccctgatgacgctatagaattaacaggtagagtagattcatctgtaaataaaaaa
gttaaagttaaagacctgtgggattcttttgcaacatcggcttggatgtgtgcagatcca
gctcctcaattctctgatacttttaatgcatggcacacttgtcctgctggagaagacgga
aacactaatgctaaacataatagaattaactccacaaatccttgtggtgaatatgctttt
ttagatgatagttcttgcaatttagcctctataaatatatacaaattttatgatgatgaa
cgaaagaacattgatttagaaagttatcttcacgttgtgggccttgttcaattggcttta
gaggcttctatatactggggacagtttcctacaaaagatattgccagaaagacttatatg
tttagagcaacaggacttggaataacaaatttagcttcactacttatggtattaggatat
ccttatgattccgaaaaagctagaaatatttcatcttctttagttggactgttaactgga
tattcatactatatatcctcattaatggctaaagaaataggtgctttcgaaaaattctct
ataaataaaccttatatgctaagagtaattaaaaatcatgctagagtagctggaagtata
actagtccatacgaagacttaaactacaatccaataaaagttgatcacaaattattagaa
aacataggtttttctgagttaagtagtctattaaaaaaatcttggttaaaagcattagat
agcggtgaaaaatatggatatagaaatgcccaagtatcagttatagctcctactggcact
atttcctttgcaatggattgtgctgctacttctatagaaccattttttagtcatgtagtt
tacaaaaaattatctggtggcggaatgatgactgtaactaatccagttatagagctttcc
ttaaaaaaccttggatattctgaagaacaaataaaagatattttacaatacgttttagaa
aaagaagtagtagaaactaaagaaggctttaaatacgagaaggtattagacggtaaaata
gagggagctcctcacttaaaaaaggaacattacgctatctttgacactgccaacaaatgt
ggtagtgggaaacgatacattgaacctatgggacatgttaaaatggttgcagccctaacg
cctctaatatccggagctatttctaaaaccgttaacttacctaataatgctactgtagaa
gacttcaaaaaagttatactaacttcttgggaattaggtataaaaggaataactctttat
agggacgggtgtaaagctagccaacctttaaacataagtttatcttcagaaaaagatttt
aaattagaagatttaagctataagaaacttcttgaaaaagcaaaagaacttgaaagagaa
cttcaaaggggcgtcccttattcaaaacgtgagaaagccattggtataaggaatggtact
actcatccagctcaaataaacgatgttaaaatttatactactgtgaacagaagacaaaat
ggagaaatatcagaaatttatattacaacagatagagaaggtactactataatgggacta
ttaaattccctttctaaagctttgtctattatgttgcaataccatgtccctcctcaagat
atatctaaaatgcttaggggacaaaaatatgaaccttatggatttgttcaaaaacatcca
tatataaaatacgtatcttctatatctgaccttattagtaaaataattgatatagaagtt
ggtgatttctctagatgtcaagtaaagcctgagaattatgatttaaacaccaacgctcgt
aatattatcttcaatacaaaagacattattaaagatcagattgctactaactcacctaac
tatgctaatggtgaatctaagaattctaacaacaataataatgtatctaacaatgattta
aattcagataatatgtatagaactgttaaaggtaatactatagctggtgaaagactttat
tgttctacttgtcctacttgttctagtactagaatggttagaaatggaacttgcttggtt
tgcctagattgtggctctactacaggatgtagttaa

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