Clostridium cochlearium: SAMEA4530647_0522
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Entry
SAMEA4530647_0522 CDS
T06756
Symbol
ybhF_1
Name
(GenBank) antibiotic transport ATP-binding protein spaF/mutF
KO
K20490
lantibiotic transport system ATP-binding protein
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh02010
ABC transporters
ccoh02020
Two-component system
ccoh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SAMEA4530647_0522 (ybhF_1)
09132 Signal transduction
02020 Two-component system
SAMEA4530647_0522 (ybhF_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMEA4530647_0522 (ybhF_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoh02000
]
SAMEA4530647_0522 (ybhF_1)
Transporters [BR:
ccoh02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lantibiotic transporter
SAMEA4530647_0522 (ybhF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA_29
SMC_N
DUF2813
AAA_23
RsgA_GTPase
NPHP3_N
AAA_30
AAA_15
ATPase_2
Adeno_IVa2
AAA_27
AAA_14
MMR_HSR1
ORC-CDC6-like
Mg_chelatase
AAA_13
Motif
Other DBs
NCBI-ProteinID:
SNV69449
LinkDB
All DBs
Position
1:517985..518689
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AA seq
234 aa
AA seq
DB search
MNEIILETKRLCKTFKKQEAVKEVSISVQRNSIYGLLGPNGAGKSTLLKMITGMLRPTSG
EVFFHGHKWSRKDLRKIGSLIESAPLYENLTAKENLKVRTTVLGLPDSRIDEVLSIVELK
DTGKKRAGQFSMGMKQRLGIAIALLNNPKLLILDEPTNGLDPFGIQELRELIRSFPSKGI
TVILSSHILSEVEQIADHIGIISGGVLGYEGELKRGEDLEKLFMNIAGKYRREK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaattattttagaaacaaaaagattgtgtaaaacatttaaaaaacaagaggcg
gttaaggaagtttcaatatcagttcagagaaattcaatatatggattactaggaccaaat
ggggcaggaaaatcaacattattaaaaatgattacaggaatgcttagaccaacttcaggt
gaagtttttttccatggacataaatggagtagaaaggatcttagaaaaattggttcttta
atagaatcagcacctttgtatgaaaatttaacggcaaaagaaaatttaaaggttagaact
acagtactcggattaccagattcaagaatagatgaagtattaagtatagtagaacttaaa
gacacagggaaaaagagggcaggacaattttctatggggatgaaacaaagactaggaatt
gccattgcacttttaaacaatccaaaacttttaattttagatgaaccaactaatggacta
gacccctttggaatacaagaattaagagaacttatacgttctttcccaagcaaaggcatt
acagtgatattatcaagtcatatactaagcgaagtagaacagattgctgaccatattgga
attatatcaggtggagttcttggatatgaaggagagttaaaaagaggagaagatttagaa
aaattatttatgaatattgcgggaaaatataggagggagaagtaa
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