Clostridium cochlearium: SAMEA4530647_0534
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Entry
SAMEA4530647_0534 CDS
T06756
Symbol
yhaM_1
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoh03019
]
SAMEA4530647_0534 (yhaM_1)
Messenger RNA biogenesis [BR:
ccoh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAMEA4530647_0534 (yhaM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
Cas3_HD
HDOD
HIN
TBSV_P22
Motif
Other DBs
NCBI-ProteinID:
SNV69623
LinkDB
All DBs
Position
1:528901..529800
Genome browser
AA seq
299 aa
AA seq
DB search
MKDLFIKDIEPGKKIKGSFMIMKILYKDENNRTIMYIGDNTGELKASIIEGDYELQKGDV
IECEAVFETILKVESFSKQDEFKLEDYLPSVKRPIEDILKEIEDISKEEFKSEEIIILDR
YFFRNNKFLHKFKRGIGGARQHHNYIGGLAEHTLNVMYMAKILAYRYNCRNKEIAILGAK
LHDIGKTEEYFVEGPFSYTLRGEMEGHIVIGVTMLEEAFREKPELYSEEFKNRMKGCIVQ
HHGKMEYGSPKTPNTEEAYIVHYADYVDATMNKVAQIKEGLDPNTWSDYDRRIAGKLYI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttatttattaaagatatagaaccaggtaagaaaattaaagggtcttttatg
ataatgaaaatattatacaaagatgaaaataatagaactattatgtatataggagataat
acaggagagcttaaagcatctattatagaaggagattatgaactccaaaaaggagatgta
atagaatgtgaagcagtttttgaaaccatattaaaagtagaatctttttcaaaacaagat
gaatttaaattagaagattaccttccatctgtaaaaagacctattgaagacatattaaaa
gaaatagaggatatatcaaaagaagagttcaaaagtgaagaaataataattttagataga
tatttctttagaaataataagtttttacataaatttaagagaggtatagggggtgcaagg
caacatcacaattacataggaggactagcagagcatactttaaatgtaatgtatatggca
aaaattttagcctacagatacaattgcaggaataaagaaatagcaatacttggagcaaaa
cttcatgatataggaaaaacagaagagtattttgtagaagggcctttttcatacactcta
agaggggaaatggaagggcatattgttataggagtaactatgctagaagaggcctttagg
gaaaaacctgaattatatagtgaagaatttaaaaatagaatgaaaggctgcatagttcaa
catcatggaaaaatggaatacggatctcccaaaacaccaaatacagaggaagcctatata
gttcactatgctgattatgtagatgccacaatgaataaagtagctcaaataaaagaagga
ttagatccaaatacatggtcagattatgataggagaattgcaggaaaactttatatataa
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